Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_037391 |
| gene name | itprid2 |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007120.7 |
| NCBI id | CM002893.2 |
| chromosome length | 56459846 |
| location | 44304980 ~ 44369857 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| itprid2 | Predicted to enable actin binding activity. Predicted to act upstream of or within COP9 signalosome assembly and positive regulation of T cell receptor signaling pathway. Predicted to be located in plasma membrane. Orthologous to human ITPRID2 (ITPR interacting domain containing 2). |
| id | name | namespace |
|---|---|---|
| GO:0005886 | plasma membrane | cellular_component |
| GO:0003779 | actin binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-090824-1 | Predicted to enable actin binding activity. Predicted to act upstream of or within COP9 signalosome assembly and positive regulation of T cell receptor signaling pathway. Predicted to be located in plasma membrane. Orthologous to human ITPRID2 (ITPR interacting domain containing 2). |
| ensembl_id | ENSDARG00000038938 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00073570 | True | 453 | mRNA | 0.55 | 5 | 44304980 | 44369857 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_037390 | itga4 | coding | upstream | 216913 | 44034790 ~ 44088067 (+) |
| XLOC_037388 | ube2e3 | coding | upstream | 421713 | 43797902 ~ 43883267 (+) |
| XLOC_037389 | BX649590.1 | coding | upstream | 449370 | 43855495 ~ 43855610 (+) |
| XLOC_037387 | BX470133.1 | coding | upstream | 529615 | 43775251 ~ 43775365 (+) |
| XLOC_037386 | CU855879.1 | coding | upstream | 973469 | 43331395 ~ 43331511 (+) |
| XLOC_037392 | itprid2 | coding | downstream | 21397 | 44391254 ~ 44420380 (+) |
| XLOC_037393 | ppp1r1c | coding | downstream | 60848 | 44430705 ~ 44489978 (+) |
| XLOC_037394 | NA | coding | downstream | 85286 | 44455143 ~ 44456108 (+) |
| XLOC_037395 | nckap1 | coding | downstream | 351951 | 44721808 ~ 44825419 (+) |
| XLOC_037396 | frzb | coding | downstream | 462175 | 44832032 ~ 44839148 (+) |
| XLOC_037385 | NA | non-coding | upstream | 1399358 | 42732199 ~ 42905622 (+) |
| XLOC_037383 | NA | non-coding | upstream | 1804696 | 42348958 ~ 42500284 (+) |
| XLOC_037397 | BX571855.1 | non-coding | downstream | 562318 | 44932175 ~ 44932293 (+) |
| XLOC_037399 | NA | non-coding | downstream | 669908 | 45039765 ~ 45044991 (+) |
| XLOC_037400 | BX510317.1 | non-coding | downstream | 694298 | 45064155 ~ 45064269 (+) |
| XLOC_037401 | NA | non-coding | downstream | 742639 | 45112496 ~ 45122990 (+) |
