Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110502450 |
| gene name | LOC106607022 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 21560000 ~ 21604318 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ras and Rab interactor 2-like isoform X1 |
| id | description |
|---|---|
| K23687 | RIN2_3; Ras and Rab interactor 2/3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036959835.1 | False | 5696 | mRNA | 0.49 | 11 | 21560000 | 21604318 |
| XM_036959836.1 | True | 5122 | mRNA | 0.51 | 11 | 21561657 | 21601765 |
21,520,000
21,530,000
21,540,000
21,550,000
21,560,000
21,570,000
21,580,000
21,590,000
21,600,000
21,610,000
NC_048587.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502449 | LOC106607006 | coding | downstream | 31345 | 21523734 ~ 21528655 (-) |
| LOC110502447 | LOC106606998 | coding | downstream | 43125 | 21512971 ~ 21516875 (-) |
| LOC110502445 | NA | coding | downstream | 255569 | 21298594 ~ 21304431 (-) |
| LOC110502444 | LOC106606853 | coding | downstream | 274069 | 21144640 ~ 21285931 (-) |
| LOC110502440 | LOC106606775 | coding | downstream | 710381 | 20832501 ~ 20849619 (-) |
| LOC118943877 | LOC106607043 | coding | upstream | 56140 | 21660458 ~ 21663289 (-) |
| LOC110502452 | LOC106607058 | coding | upstream | 73882 | 21678200 ~ 21822311 (-) |
| LOC110502455 | LOC106607083 | coding | upstream | 1211939 | 22816257 ~ 22870825 (-) |
| LOC110503091 | LOC106607091 | coding | upstream | 1275469 | 22879787 ~ 22950292 (-) |
| LOC110502457 | LOC106605630 | coding | upstream | 1394921 | 22999239 ~ 23006480 (-) |
| G1842039 | NA | non-coding | downstream | 97841 | 21460956 ~ 21462159 (-) |
| G1842008 | NA | non-coding | downstream | 132113 | 21427462 ~ 21427887 (-) |
| G1841964 | NA | non-coding | downstream | 177739 | 21354681 ~ 21382261 (-) |
| G1841909 | NA | non-coding | downstream | 231714 | 21260825 ~ 21328286 (-) |
| G1841823 | NA | non-coding | downstream | 447582 | 21112208 ~ 21112418 (-) |
| G1842145 | NA | non-coding | upstream | 43928 | 21648246 ~ 21651632 (-) |
| G1842169 | NA | non-coding | upstream | 81763 | 21686081 ~ 21686343 (-) |
| G1842170 | NA | non-coding | upstream | 84978 | 21689296 ~ 21689536 (-) |
| G1842257 | NA | non-coding | upstream | 209332 | 21813650 ~ 21816666 (-) |
| G1842419 | NA | non-coding | upstream | 426139 | 22030457 ~ 22030728 (-) |
| G1841959 | NA | other | downstream | 188201 | 21345514 ~ 21371799 (-) |
| G1841694 | NA | other | downstream | 616385 | 20943307 ~ 20943615 (-) |
| LOC110502408 | LOC106606370 | other | downstream | 2174958 | 19261070 ~ 19385465 (-) |
| si:dkey-51a16.9 | LOC106576688 | other | downstream | 2438657 | 19111958 ~ 19145332 (-) |
| LOC110502394 | LOC106606249 | other | downstream | 2705828 | 18849389 ~ 18854222 (-) |
| G1843946 | NA | other | upstream | 1578669 | 23182987 ~ 23233423 (-) |
| LOC110502461 | LOC106607165 | other | upstream | 1611167 | 23213905 ~ 23218749 (-) |
| LOC110502462 | LOC106607169 | other | upstream | 1740773 | 23344353 ~ 23358461 (-) |
| G1846858 | NA | other | upstream | 3835489 | 25439807 ~ 25440387 (-) |
| G1850441 | NA | other | upstream | 6470607 | 28074925 ~ 28078251 (-) |
