XLOC_037392 (itprid2)


Basic Information

Item Value
gene id XLOC_037392
gene name itprid2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 44391254 ~ 44420380 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073571
GTCGTTTCCGTCAGACCGAAGTCTTGGCTACAGTGGCGAACGTCCTCTCCGATATTTATTCCCACGTATCTGGAAAACCCACAGATAAAATCGGCAATGGTGACATGGAGACCAATGTGCCTAATCCGCTAAAAAAGAGAAGCTCTGCTGGAAACTTTGCTAAAATTCTCAAGCGCAACTTTACGAAGCAGAACCTGCTGGCCTCCATCTCGGATGGAGAAACCAAACAGCCTAACAATGAGAGCTCCAACATGCGGGACGTTCAGACGGATACAGAccacaaaacacaacagaagagcTTAAAGAAAAAGGATTCATCTTTGGCGACCGTGACGGAGGAGGCTCAGCAGAATATCTCTGATGTTTCGATCAGCGCAGATTTTACGTTGACCAATGGCGAGTCCACAGACTTGCCTCTGCCTCCGGTCCTAGTGAGCATCAGTCAGGCGTCTGAAGAGAACGATACCTCTGAATTGAAGGTAAACGGGTGCCATGAGGCCATCACGTCCACCCCAGATAAAGAGCCGTCCGGCCTGCTGTCAAACCCACACATCATCCACTTGCTCGACCAGCCCAGAGACTCCTTTGAGATGGAGGAGttgCAGAGTAATGAGGATGAAACTCTTCCTGGTCCAGGCGGCATGTCTCGATCTGACAGCGAGCGGTTATTGAGGACAGCCAGCCAGCAGTCTGACAGCAGCGGGTTTGCTGAGGATCCATCCACAGACGGTTCGGGTAATCACCTGAAGGTACAAGAGAGCTCAGACAGCTGTGACAGTGAAACCACAGTAACATCGCATGCTGAAGTCAGCACACCCATAGCATTGGAATACCCCAAGTTTGACAGATTCCCAAGTGAGGAAGTTCAGCTCTACCGAAGCACAACTACCCAATCTGCAACCAATCAAGAAGTCCATGACATCCCCAATCTCCAAATTCCCAATCCAAACTTGGACGAAATTAGCACCAATGGACTGCTTCTTTCTCCTGACTCAGATAGGGCATCTGTCATTGAGTCCGTTTCCACCATAGACTCTCAAGAAGGAAATTCAAACATGATGATAGATCATACAGTGGACTCCATACTGAAAGTAGCTCATGAGGGCAACTTATCCCAACCTAGTCTGGGCATAAATCAAAAGTCTCCTGAAGATCTACTGGAGCAAGACTCCTCATCAGAGCTTCCAGACTCATCAGATCTTAAGCAGTCCCACCTTACAGCTCAAAGGAGATCCATGGCACTCCACACAGGCCATCAAAGATCATCCTCAATGGAGGAGGAGCGTCCTGGCCGAGTGTGGGTGAGGGATCGGGGCCTGCTGAGGGAGAGCCAGGAGAGGAATCCTTTAAGGAGATCCAGCTCCCTCCCATTATCTTCGCTCAACCCGGCTCGCGTGGTCACCTCCATGCGCATCCAGCTTGGAAAAGGTTCAGTCAAGCACTGTACCCCGCCATCATACACATACCGCTATGAGGAAGACCATTGCAGTGACCGAGAAGAAGTAGACTCCATCTTGGAGGAGGATGAAGTGGATGGTTCGGGTGTCCAATCTGCGCTCCCGAACTCTGGATCAAAGATGAACAGAGGAACTTCACCACCACCTCCACCACACCCTCTCGATATACCCCAACATCTGGCTCGCTCCTCCACCTCGCTTTATAGCGTTCCCGCTGACTGGCCGCACAGGCCTTTGGGTGAAGGTACAAACTGGAGCGCTAGCGTCCCTAACCTTTCTCATTTTACAGCACCATCCCACTTTCCTCATCACGGAACCTTCTACTCTCCGCAACACGGAGTGTCCTACAATTCCTCATACCCATCTAGGCTTCCCTTCCCACAGTACCAAAACTCGCCTTGTCCTCCACCGCTTCAAAGCAACACATTTGTTCCACCACAGGGGGCACACTTTACACCTCAGAACAATATGCATTATGCTCACCCGCACAGTGCTCCCTACAACCCATTCTATCCATCTAATAACATTCCTCAAGGAACACCCTATGACCCATCGTTGAATATGCAAGGCAACCCGTACCCAAACCATGTCCCTCTTGCTCAATCCCACAGCGCCCCTTACAGTTCGGGATACAATGGTTCACCTCATCACCCTGCTGCTGTTTACAGCCATCCGTATTATCCCTCACCCGCCTACCCTTTCTCATTTGGGACGCCTCCTGCCCCTACCCCTGCGATGGGCAGCACAGAGATGCAGCTCAGGAGGGTCCTGCATGACATTCGTGGGACAATGCAAAATCTTGGTCAGAGCTCATCCGTGCATGGAGGAGACACACCCATGGACAGGATCGGCACACCGCGCTCCGTCCAACCGCTTTACGAGGAGCTCCAGATGCGGCGCAGGAGTCTGAATGTCTTCCGGACTCAGATGATGGATCTTGAACTGGCCCTCATGAGACAGCAGTCTTTGGTCTACCAGCATCTCAGTCCAGAAGAGAGGCGGGAGGCAGAGCAGCTTCAGACGCTGCGGACTGCAGTCAGGCAGGAGCTGCAGGAGCTGGAGCTGCAATTGGAGGATCGGCTGCTCTCTATCAATGAACAAATGCGCAACAGCTCGCAACACATCGGCTTCTACCGACACCACATGGGCATGCACAGAGGTCACAGCATGGAAAGCCTGTCTAATTCTTCAGCACTGAGGGCCATGGAGCCGGTGACGGATCTTCTGAAGGAGCAATTGTACCTTCAGTCTGAGCTGGCATATGAGGCTGCAACCCCCAGTTCAGGCCGTTCATCGAGGGCGTCCAGTCCTGTCAGATTCAACCGAACACTGGAGTCTTGCTCTCCATCCCCACAGAGAGCCAGCGTTTACCGGGCCACCCTCAACCTCATGCCCACCCTACCTCCACGGCCGGGGATGGAAGCTCCTCGGGATGTTTCTCCTGAGAGGATGGAGTCAAACCCGACACCCACTTCTCTGGAGGTCAGCAGAGATGAGGACGAGGTGTCACTGGATGGTCATGGGAGCAGGACGGCCGAAGATTGCAGTCCCACAGAGTGGAGGAGTAGAAGTAGAGGAAATGGAGACCTGCAGCATCTCATAAAGGAGATTAAAGAAAGCATCGCACATGAAATCCGGCAGGAGATCGTGAATGAGCTTCTGGCTGCCGTGTCGCCACACAGATCTCCTCTTCCAGCAAGGCAGCCCCCTGTGTGAGCAGCATATAACAGAGGATGGAGCAGGTGAAGACGAAGAAAACCCTGTGAAATAGTCACAACGAACACTGGTTAAAGCTTTGCACTGAGAACGGCCCAGCACCTCTCTCTGGTTCTGCCTGTGAAGCCCTTCCAGACTCCACCGCTTCAGGGAATCTGCTTAAACCAATCCAGATCCCACATTTACCGCGGTTGATATCGTCCAATTCCACTAAAGGGGCACACAGCTTACTGTGGTATCTGTCTGGTACATATTATGGAAATGTAATGAATCTTTTGGGATGTATTTAAGTATGTGATGCAGGTCTTGTCGGATGTTTGCAGACTTGTCGGGTGATTCAAAGTTTTCTGTGTGAGTGCGTCTTTGTCTGTCTAGGATAAAATGTCTACTGTAATCAGATTTGTTTTCTAATTCAGCCTCTGTGAGGAACTAACTGTGCAATACATTTAActctctatctttctctctctctcaaacttgaactgaccaatcacaactaCTGTTCTACCCAAAATGCACACGGCTGTCTTTATTTCTGTTGATGGTCTATCACATACTGTATGTGTAGATGAGACACTTAAAAGCACATTCATAAACATAATGTCCTGTGAGAAGAAAAAGCACTAATTTCTCTTTATATAcaagtatatttacacacactagCTAGCACGCCTTTAAAAGATATTGTTATTCTTGTAAACAGCAGTGGATGGTCTGTCAGATCTGCTGTCTTCTGATGAGGATTTAAAGCGTTTGACTTGAgtgtgaatgatttttttttctttttttttatgtctgagcTGTAATGAATTGTAATACTAATTGATTTATGCGACTAAGGGGATGTGTTCCTTTTTCGCCTGGGATGCATGAGGGATAATCTTTAATGCAAATCAttaataaagatttatttattttgttcatca
>TCONS_00073572
CAGATGTCTAATTGATGCATGTTTTCATCTGGATTTTGTTCTTGTTTGTTGATAAGCTACATATATGTACagtcaacggccactttattaggtacacattccaactgcttgttaacacaaatttctaattgcatggcagcaactcaatgcatttaggcatgtaaacatggtcacgacgatctgctgcagttcagactgagcatcagaatggggaagaaaggtgatttaagtgactcgatttctgctgcgacattcggattttagggtcagaatttggcgccaataacatgaaagcatggatccatcctgccttttatcaatggtttaggctggtggtggtggtgtaagggtttaagggatattttcttggcacactttgggcccattagtactaattgagcaccatgtcaatgccacagcctacctgagtattgttgctgaccatgtccatcactttTTGACCACAGTGTCATAAaacttgaatcatctcagactggtttcttgaacatgacaatgagctcctccacagtcactagagtcaatccaatagagcacctttgggatgtggtgaaactggAGATTTGTATCATGGATGTGAAGCTGagaaatttgcagcaactgtgtgaagctgtcatgtcagtatggaccaaattctctgagaaatatttttcagtactttgttgaatgtatgccacgaaggattaaagtaGTTCTGTAGCAAAAAAaggtactagttaggtgtacctaatagttAAACACTTATGGGAAAACAGAAAAACAGCTTGTGATTTCTTTTGCAATTTTAAACTTAATCTAAATGATGTGATGTAACTTTAAAACTCATAAGCATTCATTAGTTAAACTGTCCTGGGGTCTTTTACCGCTGGGAAATTAGTCCAAGGCACTCAGTTTTGGTGTTTATATGTTTCTCCCTGCAGAGCGGTTATTGAGGACAGCCAGCCAGCAGTCTGACAGCAGCGGGTTTGCTGAGGATCCATCCACAGACGGTTCGGGTAATCACCTGAAGGTACAAGAGAGCTCAGACAGCTGTGACAGTGAAACCACAGTAACATCGCATGCTGAAGTCAGCACACCCATAGCATTGGAATACCCCAAGTTTGACAGATTCCCAAGTGAGGAAGTTCAGCTCTACCGAAGCACAACTACCCAATCTGCAACCAATCAAGAAGTCCATGACATCCCCAATCTCCAAATTCCCAATCCAAACTTGGACGAAATTAGCACCAATGGACTGCTTCTTTCTCCTGACTCAGATAGGGCATCTGTCATTGAGTCCGTTTCCACCATAGACTCTCAAGAAGGAAATTCAAACATGATGATAGATCATACAGTGGACTCCATACTGAAAGTAGCTCATGAGGGCAACTTATCCCAACCTAGTCTGGGCATAAATCAAAAGTCTCCTGAAGATCTACTGGAGCAAGACTCCTCATCAGAGCTTCCAGACTCATCAGATCTTAAGCAGTCCCACCTTACAGCTCAAAGGAGATCCATGGCACTCCACACAGGCCATCAAAGATCATCCTCAATGGAGGAGGAGCGTCCTGGCCGAGTGTGGGTGAGGGATCGGGGCCTGCTGAGGGAGAGCCAGGAGAGGAATCCTTTAAGGAGATCCAGCTCCCTCCCATTATCTTCGCTCAACCCGGCTCGCGTGGTCACCTCCATGCGCATCCAGCTTGGAAAAGGTTCAGTCAAGCACTGTACCCCGCCATCATACACATACCGCTATGAGGAAGACCATTGCAGTGACCGAGAAGAAGTAGACTCCATCTTGGAGGAGGATGAAGTGGATGGTTCGGGTGTCCAATCTGCGCTCCCGAACTCTGGATCAAAGATGAACAGAGGAACTTCACCACCACCTCCACCACACCCTCTCGATATACCCCAACATCTGGCTCGCTCCTCCACCTCGCTTTATAGCGTTCCCGCTGACTGGCCGCACAGGCCTTTGGGTGAAGGTACAAACTGGAGCGCTAGCGTCCCTAACCTTTCTCATTTTACAGCACCATCCCACTTTCCTCATCACGGAACCTTCTACTCTCCGCAACACGGAGTGTCCTACAATTCCTCATACCCATCTAGGCTTCCCTTCCCACAGTACCAAAACTCGCCTTGTCCTCCACCGCTTCAAAGCAACACATTTGTTCCACCACAGGGGGCACACTTTACACCTCAGAACAATATGCATTATGCTCACCCGCACAGTGCTCCCTACAACCCATTCTATCCATCTAATAACATTCCTCAAGGAACACCCTATGACCCATCGTTGAATATGCAAGGCAACCCGTACCCAAACCATGTCCCTCTTGCTCAATCCCACAGCGCCCCTTACAGTTCGGGATACAATGGTTCACCTCATCACCCTGCTGCTGTTTACAGCCATCCGTATTATCCCTCACCCGCCTACCCTTTCTCATTTGGGACGCCTCCTGCCCCTACCCCTGCGATGGGCAGCACAGAGATGCAGCTCAGGAGGGTCCTGCATGACATTCGTGGGACAATGCAAAATCTTGGTCAGAGCTCATCCGTGCATGGAGGAGACACACCCATGGACAGGATCGGCACACCGCGCTCCGTCCAACCGCTTTACGAGGTACATCATTTCCCAAAGAGGAAGCAGTCACATGCTAGTTTGATTTTTCATAACTTTGAGTTGCATCAGACTCTTACAAAACGCAGATGA

Function

symbol description
itprid2 Predicted to enable actin binding activity. Predicted to act upstream of or within COP9 signalosome assembly and positive regulation of T cell receptor signaling pathway. Predicted to be located in plasma membrane. Orthologous to human ITPRID2 (ITPR interacting domain containing 2).

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0003779 actin binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-090824-1 Predicted to enable actin binding activity. Predicted to act upstream of or within COP9 signalosome assembly and positive regulation of T cell receptor signaling pathway. Predicted to be located in plasma membrane. Orthologous to human ITPRID2 (ITPR interacting domain containing 2).

Ensembl:

ensembl_id ENSDARG00000038938

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073571 False 4099 mRNA 0.49 11 44391254 44420380
TCONS_00073572 True 2707 mRNA 0.47 3 44397151 44404160

Neighbor

gene id symbol gene type direction distance location
XLOC_037391 itprid2 coding upstream 21397 44304980 ~ 44369857 (+)
XLOC_037390 itga4 coding upstream 303187 44034790 ~ 44088067 (+)
XLOC_037388 ube2e3 coding upstream 507987 43797902 ~ 43883267 (+)
XLOC_037389 BX649590.1 coding upstream 535644 43855495 ~ 43855610 (+)
XLOC_037387 BX470133.1 coding upstream 615889 43775251 ~ 43775365 (+)
XLOC_037393 ppp1r1c coding downstream 10325 44430705 ~ 44489978 (+)
XLOC_037394 NA coding downstream 34763 44455143 ~ 44456108 (+)
XLOC_037395 nckap1 coding downstream 301428 44721808 ~ 44825419 (+)
XLOC_037396 frzb coding downstream 411652 44832032 ~ 44839148 (+)
XLOC_037397 BX571855.1 coding downstream 511795 44932175 ~ 44932293 (+)
XLOC_037386 CU855879.1 non-coding upstream 1059743 43331395 ~ 43331511 (+)
XLOC_037385 NA non-coding upstream 1485632 42732199 ~ 42905622 (+)
XLOC_037383 NA non-coding upstream 1890970 42348958 ~ 42500284 (+)
XLOC_037399 NA non-coding downstream 619385 45039765 ~ 45044991 (+)
XLOC_037400 BX510317.1 non-coding downstream 643775 45064155 ~ 45064269 (+)
XLOC_037401 NA non-coding downstream 692116 45112496 ~ 45122990 (+)

Expression


Co-expression Network