LOC110502463 (LOC106607177)


Basic Information

Item Value
gene id LOC110502463
gene name LOC106607177
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 23282091 ~ 23344137 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021580490.2
ATGAtagatgaaggaggagagagagctgaggaTGCAGGTTTGGTACACAATCATCCATCGAATCGTCTCGTAGCATCGCCAACTTCCACTAGCCCTCCGCTGCAGAGGAGATGTATTCCCAAAAGGACTGAATCATACATCTCTTCAAAGGAGCATCCCGCACACAGAATTCACTTCGACAGGCACCTTGATACAAGCTAGAAATGATGATTGGTTCTCTCACATATGGGACAGCAGTTGTATTGATATTACTAAAAGCACTGTTTCTTGCGACACACGCCACAGTCGATGGGATCTTCACAAATCATCTCTTGGTTCAGTTGCATGAAGGTGCACATGATGAAGCGCACCAACTTGCAACAGAGCACGGGTTTCATAGTGCGCGGAAGCTTCCCTTTGGAGAGGGTCTTTTTCACTTCTACCCCCAGAACACCCATCAGAGGAGGAGCAAACGCAGCCTTCGCCACAGGCAGCACCTGGAGAAGGACCGCAGGGTAAAGAAAGTGTTGGACCAAGAGGGTTTCGGCCGACAGAAGAGAGGGTACAGAAGCATTGATGAAATTTATATCAAAATGACCGACCCCCTATTCAGCAAACAGTGGTATCTGATCAACACTGGCCAGGCTGATGGGACCCCCGGACTCGACCTGAATGTGGCTGAGGCTTGGGGACTGGGTTACACCGGGAGAGGCATCACCATAGCTATCATGGACGATGGGATCGATTATCTCCACCCAGATCTTGCATCAAACTACAATGCAGAGGCCAGCTTTGACTTCAGCAGCAATGACCCATACCCATATCCCCGCTACACGAATGACTGGTTTAACAGtcATGGAACAAGGTGTGCTGGTGAGGTGTCTGCAGCAGCCAACAACAACATCTGTGGAGTGGGAGTGGCCTACAACTCTAAGGTGGCAGgtatCCGTATGCTGGACCAACCCTTCATGACAGACATCATCGAGGCATCATCCATCAGCCATATGCCCCAGGTCATTGACATCTACAGTGCTAGTTGGGGTCCCACCGATGACGGCAAGACAGTAGACGGACCCAGAGAGCTCACTTTGCAAGCCATGGCTGATGGAGtcaacaagGGCCGAGGAGGGAAAGGCAGTATCTACGTATGGGCCTCTGGAGACGGTGGTAGCTATGATGACTGTAACTGCGATGGTTACGCCTCCAGCATGTGGACCATCTCCATCAACTCAGCCATCAACGACGGCCGCACGGCCCTGTATGACGAGAGCTGCTCCTCCACCCTCGCGTCCACCTTCAGCAACGGGCGCAAGAGGAACCCTGAGGCTGGCGTGgccaccACGGACCTGTATGGAAACTGCACCCTGCGCCACTCTGGAACATCAGCAGCAGCTCCTGAAGCAGCCGGAGTGTTTGCCTTGGCGTTAGAGGCCaaTCCTAACTTGACATGGAGGGACATGCAGCACTTGTCCGTGCTGACCTCCAAGAGAAACCAGCTACATGACGAGGTGCACCAGTGGCGGAGGAACGGCGTGGGCCTGGAATTCAACCACCTGTTTGGTTACGGTGTGCTGGACGCTGGCGGCATGGTCAAGATGGCCAAGGAGTGGAAGACTGTCCCCGAGCGTTTTCACTGCGTGGCTGGATCATTGCAGGATGTCCATAAGATCCAATCGGGTGGCAAGCTGATTCTGACCATCTCCACTGACTCCTGCCAGGGGAAGGACAACTTTGTCCGCTACCTGGAGCACGTTCAGGCTGTGGTCACAGTCAATGGTAGTCGCCGTGGCGACCTCAACATCAACATGACCTCCCCCATGGGCACCAAGTCCATCCTGCTGAGCTGCCGGCCCCGGGACGACGACGCCAAGGTGGGCTTTGACAAGTGGCCCTTTATGACCACACACACCTGGGGAGAGGACCCCCGCGGGACCTGGGTCCTTGAGGTGGGCTTCCAGGGAGACGAGCCACAGAGAGGGGCCCTGAAGGAGTGGACCCTCATGCTCCATGGAACACAAAGTGCCCCTTACATAGACCAGATAGTGCGCGACTACCAGTCCAAACTAGCCATGTCAAAAaaggaggagctggaggaagAGCTGGACGAGGCAGTGGAGAGGAGTCTGAAAAGTCTGCTGAGTAAAAACTAGCTGACGTAGCTAACTAAACACCGTCTGGTCAGGTCTGCATGCCGGGCCGGTCTcgctctctacttctctcctatctttctctcacttctctctttctttctcgcaaTTTCcacttctctcactttctctgccCCTTCTCGCTTTATCTTGccctctctcacactttctctcccgactccctttctctcctctctcattttctttctttcctcccctcccacccttTTCTCTGctttttgtttttctgtgtttatATTAGCCATCTACTTCCAATGAATGTTTCTTGTAATCCGATGATAATGATAAAAGTGTAACCTTAAAATAATCTGTTCTatagagaaaacaaaaagatcctATCTGGCTTTCGGTCTGTTTTTTTTACACATGACAAAAATGTATATAAACATAATGCATCCCACTATATGGTGTTCTTGCTTTCCCCCACACCTCCACCTCTGGTGAACCAACTGTTGTACAGTTTGTGACTGTAAATGATTTTCAGTGTCATTCTACTTAAAGTTTAATATCTTGCAAACAGAGGAGTGATACTTCTTTCCGTTTATATTCTTGTGACAAGCAACTGTTTCTATATAAACAAGACAAGGATCGTGTGATTTATTTTGCAGCCTGTGGTCCTCAAAGCGTATTGCAGAATAACCTTTGTCGTATACTATAATAAATCTATTCAGCTGTT

Function

NR:

description
neuroendocrine convertase 2-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG:

id description
K01360 PCSK2; proprotein convertase subtilisin/kexin type 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021580490.2 True 2823 mRNA 0.50 12 23282091 23344137

Neighbor

gene id symbol gene type direction distance location
LOC118943883 NA coding upstream 34446 23246034 ~ 23247645 (+)
LOC110502460 LOC106607150 coding upstream 74726 23153198 ~ 23207365 (+)
LOC110502459 LOC106607144 coding upstream 216348 23028909 ~ 23065743 (+)
LOC118943856 NA coding upstream 303489 22971449 ~ 22980249 (+)
LOC110502456 NA coding upstream 312099 22963000 ~ 22969992 (+)
LOC110502464 LOC106607182 coding downstream 109945 23454082 ~ 23732901 (+)
LOC110502469 LOC106607213 coding downstream 733771 24077908 ~ 24111417 (+)
LOC110502471 NA coding downstream 805898 24150035 ~ 24166011 (+)
LOC110502473 itprip coding downstream 822450 24166587 ~ 24170976 (+)
LOC110502474 LOC106607224 coding downstream 850577 24194714 ~ 24284046 (+)
G1844026 NA non-coding upstream 11952 23269906 ~ 23270139 (+)
G1844013 NA non-coding upstream 19515 23262364 ~ 23262576 (+)
G1843992 NA non-coding upstream 33465 23247835 ~ 23248626 (+)
G1843987 NA non-coding upstream 37270 23244612 ~ 23244821 (+)
G1843909 NA non-coding upstream 48646 23183029 ~ 23233445 (+)
G1844083 LOC106607169 non-coding downstream 6241 23350378 ~ 23350613 (+)
G1844084 NA non-coding downstream 7226 23351363 ~ 23351672 (+)
G1844086 NA non-coding downstream 11890 23356027 ~ 23356532 (+)
G1844103 NA non-coding downstream 24475 23368612 ~ 23368912 (+)
G1844811 NA non-coding downstream 473260 23817397 ~ 23817721 (+)
G1840558 fbxo28 other upstream 2496888 20781865 ~ 20785203 (+)
LOC110502429 ttc27 other upstream 2765205 20358591 ~ 20516930 (+)
G1839872 NA other upstream 3217104 20062064 ~ 20064987 (+)
LOC110502420 slc18a2 other upstream 3242151 20037044 ~ 20058237 (+)
G1839383 NA other upstream 3759079 19522264 ~ 19523012 (+)
G1844044 LOC106607169 other downstream 907 23345044 ~ 23346489 (+)
G1845108 NA other downstream 982127 24326264 ~ 24354246 (+)
G1849208 LOC106607606 other downstream 3930201 27274338 ~ 27276259 (+)
LOC110502527 LOC106607701 other downstream 4646137 27990245 ~ 27993189 (+)
LOC110502528 bic1a other downstream 4657738 28001291 ~ 28078254 (+)

Expression


Co-expression Network