Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118943845 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 23296397 ~ 23316350 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005039149.1 | False | 1228 | mRNA | 0.39 | 4 | 23313817 | 23316350 |
| TU2111250 | True | 837 | lncRNA | 0.35 | 2 | 23296397 | 23314387 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943883 | NA | coding | upstream | 66172 | 23246034 ~ 23247645 (+) |
| LOC110502460 | LOC106607150 | coding | upstream | 106452 | 23153198 ~ 23207365 (+) |
| LOC110502459 | LOC106607144 | coding | upstream | 248074 | 23028909 ~ 23065743 (+) |
| LOC118943856 | NA | coding | upstream | 335215 | 22971449 ~ 22980249 (+) |
| LOC110502456 | NA | coding | upstream | 343825 | 22963000 ~ 22969992 (+) |
| LOC110502464 | LOC106607182 | coding | downstream | 137732 | 23454082 ~ 23732901 (+) |
| LOC110502469 | LOC106607213 | coding | downstream | 761558 | 24077908 ~ 24111417 (+) |
| LOC110502471 | NA | coding | downstream | 833685 | 24150035 ~ 24166011 (+) |
| LOC110502473 | itprip | coding | downstream | 850237 | 24166587 ~ 24170976 (+) |
| LOC110502474 | LOC106607224 | coding | downstream | 878364 | 24194714 ~ 24284046 (+) |
| G1844026 | NA | non-coding | upstream | 43678 | 23269906 ~ 23270139 (+) |
| G1844013 | NA | non-coding | upstream | 51241 | 23262364 ~ 23262576 (+) |
| G1843992 | NA | non-coding | upstream | 65191 | 23247835 ~ 23248626 (+) |
| G1843987 | NA | non-coding | upstream | 68996 | 23244612 ~ 23244821 (+) |
| G1843909 | NA | non-coding | upstream | 80372 | 23183029 ~ 23233445 (+) |
| G1844083 | LOC106607169 | non-coding | downstream | 34028 | 23350378 ~ 23350613 (+) |
| G1844084 | NA | non-coding | downstream | 35013 | 23351363 ~ 23351672 (+) |
| G1844086 | NA | non-coding | downstream | 39677 | 23356027 ~ 23356532 (+) |
| G1844103 | NA | non-coding | downstream | 52262 | 23368612 ~ 23368912 (+) |
| G1844811 | NA | non-coding | downstream | 501047 | 23817397 ~ 23817721 (+) |
| G1840558 | fbxo28 | other | upstream | 2528614 | 20781865 ~ 20785203 (+) |
| LOC110502429 | ttc27 | other | upstream | 2796931 | 20358591 ~ 20516930 (+) |
| G1839872 | NA | other | upstream | 3248830 | 20062064 ~ 20064987 (+) |
| LOC110502420 | slc18a2 | other | upstream | 3273877 | 20037044 ~ 20058237 (+) |
| G1839383 | NA | other | upstream | 3790805 | 19522264 ~ 19523012 (+) |
| G1844044 | LOC106607169 | other | downstream | 28694 | 23345044 ~ 23346489 (+) |
| G1845108 | NA | other | downstream | 1009914 | 24326264 ~ 24354246 (+) |
| G1849208 | LOC106607606 | other | downstream | 3957988 | 27274338 ~ 27276259 (+) |
| LOC110502527 | LOC106607701 | other | downstream | 4673924 | 27990245 ~ 27993189 (+) |
| LOC110502528 | bic1a | other | downstream | 4685525 | 28001291 ~ 28078254 (+) |
