XLOC_037394


Basic Information

Item Value
gene id XLOC_037394
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 44455143 ~ 44456108 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075190
TAATCACCACCATAAACTGTTTTATATGTCCATTTCAGTGCTGAACCTGTGAACATGCTAACTGCATCATAGAGTGGAGCTGGATTTCTGATACAGATATTGATTACTGATTACAAGGTGAGTTTAATGAAACATGATAACAtggtaaagttattattatttgctatgTGGTATTATTGTCCTAATaactgaaaatacaattaaaaaatgttaCGCATACATTATGCTTGTTAATTTTGTATCTTTCCTCATCATTGTAATTCTTGTCTTAGGCATCTTCTACTGTACCTGATGTAGAAAAGACCCTTGAACTACCTGCAATTCCTTGACTGATACTTTTTGGTATGTTTAGaactgtattttattactttagcAACTAAGGGTGTTTTCTCTGTATTTTAGCAAACATGGTAAATTcttttgaacaaaacaaaatacacaaatacataaattatatGTTCTGCCATATTTTACCCAAGCTTTCACTCACCTTTGGAAAACATTTTACTCAATTTACTAAATTACTCCATTTTAGTTGTTTAACACTTAGTTGTTTAACACGCTATGTTGAtcataaatattaagttaaataaatcacaaacatTGCAGTGACAATTTCACAATAcacagtatatactgtacatgttgaTTTCAGTGGCTGTCCAGGCGAGTCCACAATCAACATTTTCAAATACATGTATTGTGTTACAAGAACAGGGCTTTGGGACTAAGTAAAATTACGTCAGCTTCCCTCACATATATTTTCAACTAGAAAATATAATTTCATGTGACTgctgacattgtttttttcttttaaatgttttaggagAAAAACCAGGAAGCTACATTCATAAATGGATGATCAGTTTTGAGGGGCAAATAATCTGTGAGAGCATCCAGCCAAGTTTTCTGTCTGGTAAAGCTGCTGTGTTTTTAACTTACGACATTTTCAATGTGGAGAACCAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075190 True 966 lncRNA 0.32 1 44455143 44456108

Neighbor

gene id symbol gene type direction distance location
XLOC_037392 itprid2 coding upstream 34763 44391254 ~ 44420380 (+)
XLOC_037391 itprid2 coding upstream 85286 44304980 ~ 44369857 (+)
XLOC_037390 itga4 coding upstream 367076 44034790 ~ 44088067 (+)
XLOC_037388 ube2e3 coding upstream 571876 43797902 ~ 43883267 (+)
XLOC_037395 nckap1 coding downstream 265700 44721808 ~ 44825419 (+)
XLOC_037396 frzb coding downstream 375924 44832032 ~ 44839148 (+)
XLOC_037397 BX571855.1 coding downstream 476067 44932175 ~ 44932293 (+)
XLOC_037398 retsatl coding downstream 538106 44994214 ~ 44998722 (+)
XLOC_037399 NA coding downstream 583657 45039765 ~ 45044991 (+)
XLOC_037389 BX649590.1 non-coding upstream 599533 43855495 ~ 43855610 (+)
XLOC_037387 BX470133.1 non-coding upstream 679778 43775251 ~ 43775365 (+)
XLOC_037386 CU855879.1 non-coding upstream 1123632 43331395 ~ 43331511 (+)
XLOC_037385 NA non-coding upstream 1549521 42732199 ~ 42905622 (+)
XLOC_037383 NA non-coding upstream 1954859 42348958 ~ 42500284 (+)
XLOC_037400 BX510317.1 non-coding downstream 608047 45064155 ~ 45064269 (+)
XLOC_037401 NA non-coding downstream 656388 45112496 ~ 45122990 (+)
XLOC_037403 NA non-coding downstream 805276 45261384 ~ 45261761 (+)

Expression


Co-expression Network