Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110502474 |
| gene name | LOC106607224 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 24194714 ~ 24284046 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| SH3 and PX domain-containing protein 2A-like |
| id | description |
|---|---|
| K11237 | BEM1; bud emergence protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036959993.1 | False | 4501 | mRNA | 0.49 | 13 | 24194714 | 24284046 |
| XM_036959992.1 | True | 4583 | mRNA | 0.49 | 14 | 24194716 | 24284046 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502473 | itprip | coding | upstream | 23738 | 24166587 ~ 24170976 (+) |
| LOC110502471 | NA | coding | upstream | 28703 | 24150035 ~ 24166011 (+) |
| LOC110502469 | LOC106607213 | coding | upstream | 83297 | 24077908 ~ 24111417 (+) |
| LOC110502464 | LOC106607182 | coding | upstream | 461813 | 23454082 ~ 23732901 (+) |
| LOC110502463 | LOC106607177 | coding | upstream | 850577 | 23282091 ~ 23344137 (+) |
| LOC110502476 | LOC106605659 | coding | downstream | 146596 | 24430642 ~ 24506556 (+) |
| LOC110502478 | LOC106607248 | coding | downstream | 417675 | 24701721 ~ 24731235 (+) |
| LOC110502480 | LOC106607275 | coding | downstream | 455670 | 24739716 ~ 24752950 (+) |
| LOC110502482 | LOC106607268 | coding | downstream | 485806 | 24769852 ~ 24772080 (+) |
| LOC110502484 | LOC106607303 | coding | downstream | 561933 | 24845979 ~ 24918794 (+) |
| G1845015 | gsto1 | non-coding | upstream | 10795 | 24174162 ~ 24183919 (+) |
| G1845005 | NA | non-coding | upstream | 61301 | 24132802 ~ 24133413 (+) |
| G1844945 | NA | non-coding | upstream | 163750 | 24023990 ~ 24030964 (+) |
| G1844846 | NA | non-coding | upstream | 329376 | 23864778 ~ 23865338 (+) |
| G1844845 | NA | non-coding | upstream | 331193 | 23863278 ~ 23863521 (+) |
| G1845184 | NA | non-coding | downstream | 160134 | 24444180 ~ 24541764 (+) |
| G1845877 | NA | non-coding | downstream | 462712 | 24746758 ~ 24815551 (+) |
| G1846029 | NA | non-coding | downstream | 538979 | 24823025 ~ 24823287 (+) |
| G1846046 | NA | non-coding | downstream | 554157 | 24838203 ~ 24838409 (+) |
| G1846048 | NA | non-coding | downstream | 556137 | 24840183 ~ 24840557 (+) |
| G1844044 | LOC106607169 | other | upstream | 848225 | 23345044 ~ 23346489 (+) |
| G1840558 | fbxo28 | other | upstream | 3409511 | 20781865 ~ 20785203 (+) |
| LOC110502429 | ttc27 | other | upstream | 3677828 | 20358591 ~ 20516930 (+) |
| G1839872 | NA | other | upstream | 4129727 | 20062064 ~ 20064987 (+) |
| LOC110502420 | slc18a2 | other | upstream | 4154774 | 20037044 ~ 20058237 (+) |
| G1845108 | NA | other | downstream | 42218 | 24326264 ~ 24354246 (+) |
| G1849208 | LOC106607606 | other | downstream | 2990292 | 27274338 ~ 27276259 (+) |
| LOC110502527 | LOC106607701 | other | downstream | 3706228 | 27990245 ~ 27993189 (+) |
| LOC110502528 | bic1a | other | downstream | 3717829 | 28001291 ~ 28078254 (+) |
| LOC110502541 | LOC106607837 | other | downstream | 4213977 | 28497576 ~ 28571528 (+) |
