XLOC_037395 (nckap1)


Basic Information

Item Value
gene id XLOC_037395
gene name nckap1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 44721808 ~ 44825419 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073577
tctctTTTAGAAAACCATGTAAAATGTAATCAATCATAGACAATGTTTACGGTGCATTTACACCCCTATGACCGGCAGGTATCGCCAGATACATATTAATAGATAGAAGGAATTTTTAGTATAGTTATAACCAGAAACAATATCCCTAATCTTCGTTTTTACACTTACCATACACATCTTTCTTTCGTCTATAATAGTTATTCTTATTTTAGACCAtttttgataataggctactgTACGACTCCTTATATTTACACTTATGTGCATGAAAAATATCTTATTGAAACATAAGCGCCAAAAGAAGCCTCCTTCAAATGTAATATCAGTAACCACATCTAACCAAATCAACTATCTTAGCAGGATGAGGGGGGCGGCGGTCCTGCGGAGGGCTGCGGTCACATGACGCAGTGACGTCGTTGCCGGAAGCAGCCTCGTTCTGGCCGTCAGGGCAacacctagaaaaaaaaaatacatccccGACGACGCGCCTGAAGCCCCTAACATGGGCGAATTTTAACACTAAAAACCGACTCATTTTTGCACCTTACCCTATAACACTACACAAGGAATCCTTTCGGTTGCGATTAAGCTCGTTTTGACGGTCGTTTGAGCCATGTCTCGGGGCGCGATGCAGCCGAGCCAGCAGAAGCTGGCGGAGAAATTGACGATCCTCAACGACCGCGGCATCGGGATGCTCACTCGCATCTACAACATCAAAAAGCAAGGACAAGTTTGGAAGGCCTGTGGAGATCCCAAGGCAAAGCCTTCCTACCTGATTGACAAAAACCTGGAGTCAGCCGTGAAATTCATTGTCAGAAAATTCCCAGCCGTTGAGACCCGCAACAACAATCAACAGCTTGCACAACTACaaaaagaaaagtcagaaataCTGAAGAATTTAGCTCTATATTACTTCACCTTTGTGGACGTTATGGAATTTAAGGACCACGTTTGTGAACTGCTGAACACTATTGATGCTTGTCAAGTTTTCTTTGACATTACTGTAAATTTTGACCTCACAAAGAACTACCTGGACTTGGTAGTGACGTACACTACCCTGATGTTGCTGCTTTCCCGAATTGAAGAGCGCAAAGCGATAATCGGCCTCTACAACTATGCCCATGAAATGACACACGGTTCAAGCGATCGAGAATACCCCAGGCTTGGACAGATGATTGTGGATTACGAGAACCCACTAAAAAAGATGATGGAGGAGTTTGTCCCTCATGGAAAATCGCTGTCAGATGCGCTGGTCTCCTTGCAGATGGTGTACCCACGCCGGAATCTGTCTGCAGATCAGTGGAGAAACGCTCAGCTGCTCAGTTTGATTAGCGCTCCCAGCACTATGCTCAACCCAGCTCAATCTGACACGatgCCCTGTGAATACCTATCCTTGGACACCATGGAGAAATGGATCGTCTTCGGCTTCATCTTGTGTCATGCGGCTCTGAACAGTGATCCTGCGGCTCTCAGTCTTTGGAAGTTGGCCCTTCAGAGCAGTACCTGTCTCTGTCTGTTCAGGGACGAGGTCTTCCACATTCACAAAGCTGCAGAGGATCTCTTCGTAAACATTCGCGGTTACAACAAACGTGTCAATGATATTCGTGAATGCAAAGAATCTGCTCTTTCACATGCGGGCTCAATGCACAGAGAACGACGTAAGTTCTTGAGGTCTGCCCTGAAAGAGCTAGCCACAGTACTGGCAGATCAGCCTGGATTGCTGGGTCCGAAGGCTCTGTTTGTGTTCATGGCACTCTCCTTCGCCCGTGATGAGATCATTTGGCTGCTCAGACATGCCGACAACATCCAAAAGAAAAGCACAGATGACTTCATTGACAAgcACATTGCAGAGTTGATCTTCTACATGGAGGAGTTGAGGGCTCACGTCCGAAAGTACGGGCCGGTGATGCAGAGGTACTATGTTCAGTACCTGTCCGGCTTTGACGCGGTGGTGCTCAATGAGCTTGTACAGAACCTGTCCGTGTGCCCAGAGGACGAGTCCATCATAATGTCGTCCTTCGTGAACACTATGACCTCTCTCAGTGTTAAACAAGttgAAGATGGCGAAGTGTTTGATTTCAGAGGGATGAGGCTGGACTGGTTCAGACTTCAGGCCTACACCAGCGTGTCCAAGGCTTCGTTGGGACTGGCAGATCACAGAGAACTGGGAAAGATGATGAACACCATCATCTTCCACACTAAGATGGTGGACTCTCTGGTGGAGATGCTTGTGGAGACTTCTGACCTGTCCATATTCTGTTTTTACAGCCGCGCCTTTGAAAAGATGTTCCAGCAGTGTCTTGAACTGCCGTCCCAGTCTCGATACTCCATCTCCTTCCCACTGCTCTGCACCCACTTTATGAGCTGCACTCATGAGCTCTGCCCTGAAGAGAGGCACCACATCGGAGACCGCAGCCTGTCCCTTTGCAACATGTTCCTGGACGAGATGGCCAAGCAAGCCCGCAACCTCATCACAGACATATGCACAGAGCAGTGCACCCTGAGCGACCAGCTACTGCCAAAACATTGTGCCAAAACCATCAGTCAGGCCGTGAACAAGAAGTCGAAAAAGCAGACAGGGAAGAAGGGTGAACCGGAGCGAGAAAAACCTGGCGTGGAGAGCATGAGGAAGAACAGACTCCTGGTCACCAATCTGGATAAACTGCACACTGCTCTGTCCGAGCTCTGCTTCTCCATCAACTACGTCCCCAACATGATGGTCTGGGAGCACACCTTCACCCCACGCGAGTACCTGACCTCCCACCTGGAGATTCGCTTCACTAAGTCTATAGTCGGGATGACCATGTACAACCAGACAACACAGGAGATCGCCAAACCATCAGAGCTGCTCACCAGCGTCCGGGCCTACATGACAGTGCTGCAGTCCATTGAGAATTATGTGCAGATTGACATCACCAGAGTCTTCAACAATGTGCTGCTGCAGCAAACCCAACACCTGGACAGCCACGGAGAGCCAACCATCACCAGCCTCTACACTAACTGGTATCTGGAGACTTTACTGCGGCAGGTCAGCAACGGTCACATCGCGTACTTTCCTGCGATGAAAGCCTTCGTCAACTTGCCCACGGAGAATGAGCTGACCTTCAACGCAGAGGAGTATTCTGACATTTCTGaAATGCGCTCTCTGTCGGAGCTGCTGGGTCCATATGGGATGAAGTTCCTCAGCGAGAGTCTCATGTGGCACATCTCATCCCAAGTTGCAGAACTGAAGAAACTTGTGGTGGACAATGTGGAGGTTTTAACCCAGATGAGGACCAGCTTTGACAAGCCGGACCATATGGCAGCACTCTTTAAGAGGCTAACATCGGTTGACAGCGTGCTGAAACGGATGACCATCATTGGTGTGATTTTGTCGTTCCGCTCTCTGGCTCAGGAAGCTCTCCGAGATGTGCTCTCTTGCCACATTCCCTTCCTGGTGAGCTCCGTTGAAGACTTTAAAGATCACATTCCTCGTGAAACTGACATGAAGGTGGCCATGAACGTGTACGAGCTGTCTTCTGCTGCAGGCCTGCCCTGTGAGATCGACCCTGCTCTAGTAGTGGCGCTGTCATCCCAGAAGTCTGAAAATATTAGCCCGGAGGAAGAGTACAAGATCGCCTGCCTGTTGATGGTCTTCGTGGCCGTTTCCATGCCGACCCTGGCCAGCAACGTGATGTCACAGTACAGTCCCGCAATAGAAGGTCACTGCAACAACATTCACTGTCTGGCTAAAGCGATAAACCAGATTGCCGCCGCTCTGTTCACGATCCACAAGGGCAGCATAGAGGATCGCCTCAAAGAATTCCTCGCCCTCGCCTCCTCCAGCCTGCTGAAGATTGGACAGGAGACGGATAAAACCACTACACGGAACAGAGAGTCTGTTTACCTGCTCCTGGACATGATCGTTCAAGAATCGCCATTCCTCACCATGGACCTGTTGGAGTCCTGCTTTCCATACGTCCTGCTCCGAAACGCCTATCACGCCGTATACAAGCAGTCGGTATCTTCTTCAGCATAA
>TCONS_00073578
ACATGACGCAGTGACGTCGTTGCCGGAAGCAGCCTCGTTCTGGCCGTCAGGGCAacacctagaaaaaaaaaatacatccccGACGACGCGCCTGAAGCCCCTAACATGGGCGAATTTTAACACTAAAAACCGACTCATTTTTGCACCTTACCCTATAACACTACACAAGGAATCCTTTCGGTTGCGATTAAGCTCGTTTTGACGGTCGTTTGAGCCATGTCTCGGGGCGCGATGCAGCCGAGCCAGCAGAAGCTGGCGGAGAAATTGACGATCCTCAACGACCGCGGCATCGGGATGCTCACTCGCATCTACAACATCAAAAAGGCCTGTGGAGATCCCAAGGCAAAGCCTTCCTACCTGATTGACAAAAACCTGGAGTCAGCCGTGAAATTCATTGTCAGAAAATTCCCAGCCGTTGAGACCCGCAACAACAATCTTGCACAACTACaaaaagaaaagtcagaaataCTGAAGAATTTAGCTCTATATTACTTCACCTTTGTGGACGTTATGGAATTTAAGGACCACGTTTGTGAACTGCTGAACACTATTGATGCTTGTCAAGTTTTCTTTGACATTACTGTAAATTTTGACCTCACAAAGAACTACCTGGACTTGGTAGTGACGTACACTACCCTGATGTTGCTGCTTTCCCGAATTGAAGAGCGCAAAGCGATAATCGGCCTCTACAACTATGCCCATGAAATGACACACGGTTCAAGCGATCGAGAATACCCCAGGCTTGGACAGATGATTGTGGATTACGAGAACCCACTAAAAAAGATGATGGAGGAGTTTGTCCCTCATGGAAAATCGCTGTCAGATGCGCTGGTCTCCTTGCAGATGGTGTACCCACGCCGGAATCTGTCTGCAGATCAGTGGAGAAACGCTCAGCTGCTCAGTTTGATTAGCGCTCCCAGCACTATGCTCAACCCAGCTCAATCTGACACGatgCCCTGTGAATACCTATCCTTGGACACCATGGAGAAATGGATCGTCTTCGGCTTCATCTTGTGTCATGCGGCTCTGAACAGTGATCCTGCGGCTCTCAGTCTTTGGAAGTTGGCCCTTCAGAGCAGTACCTGTCTCTGTCTGTTCAGGGACGAGGTCTTCCACATTCACAAAGCTGCAGAGGATCTCTTCGTAAACATTCGCGGTTACAACAAACGTGTCAATGATATTCGTGAATGCAAAGAATCTGCTCTTTCACATGCGGGCTCAATGCACAGAGAACGACGTAAGTTCTTGAGGTCTGCCCTGAAAGAGCTAGCCACAGTACTGGCAGATCAGCCTGGATTGCTGGGTCCGAAGGCTCTGTTTGTGTTCATGGCACTCTCCTTCGCCCGTGATGAGATCATTTGGCTGCTCAGACATGCCGACAACATCCAAAAGAAAAGCACAGATGACTTCATTGACAAgcACATTGCAGAGTTGATCTTCTACATGGAGGAGTTGAGGGCTCACGTCCGAAAGTACGGGCCGGTGATGCAGAGGTACTATGTTCAGTACCTGTCCGGCTTTGACGCGGTGGTGCTCAATGAGCTTGTACAGAACCTGTCCGTGTGCCCAGAGGACGAGTCCATCATAATGTCGTCCTTCGTGAACACTATGACCTCTCTCAGTGTTAAACAAGttgAAGATGGCGAAGTGTTTGATTTCAGAGGGATGAGGCTGGACTGGTTCAGACTTCAGGCCTACACCAGCGTGTCCAAGGCTTCGTTGGGACTGGCAGATCACAGAGAACTGGGAAAGATGATGAACACCATCATCTTCCACACTAAGATGGTGGACTCTCTGGTGGAGATGCTTGTGGAGACTTCTGACCTGTCCATATTCTGTTTTTACAGCCGCGCCTTTGAAAAGATGTTCCAGCAGTGTCTTGAACTGCCGTCCCAGTCTCGATACTCCATCTCCTTCCCACTGCTCTGCACCCACTTTATGAGCTGCACTCATGAGCTCTGCCCTGAAGAGAGGCACCACATCGGAGACCGCAGCCTGTCCCTTTGCAACATGTTCCTGGACGAGATGGCCAAGCAAGCCCGCAACCTCATCACAGACATATGCACAGAGCAGTGCACCCTGAGCGACCAGCTACTGCCAAAACATTGTGCCAAAACCATCAGTCAGGCCGTGAACAAGAAGTCGAAAAAGCAGACAGGGAAGAAGGGTGAACCGGAGCGAGAAAAACCTGGCGTGGAGAGCATGAGGAAGAACAGACTCCTGGTCACCAATCTGGATAAACTGCACACTGCTCTGTCCGAGCTCTGCTTCTCCATCAACTACGTCCCCAACATGATGGTCTGGGAGCACACCTTCACCCCACGCGAGTACCTGACCTCCCACCTGGAGATTCGCTTCACTAAGTCTATAGTCGGGATGACCATGTACAACCAGACAACACAGGAGATCGCCAAACCATCAGAGCTGCTCACCAGCGTCCGGGCCTACATGACAGTGCTGCAGTCCATTGAGAATTATGTGCAGATTGACATCACCAGAGTCTTCAACAATGTGCTGCTGCAGCAAACCCAACACCTGGACAGCCACGGAGAGCCAACCATCACCAGCCTCTACACTAACTGGTATCTGGAGACTTTACTGCGGCAGGTCAGCAACGGTCACATCGCGTACTTTCCTGCGATGAAAGCCTTCGTCAACTTGCCCACGGAGAATGAGCTGACCTTCAACGCAGAGGAGTATTCTGACATTTCTGaAATGCGCTCTCTGTCGGAGCTGCTGGGTCCATATGGGATGAAGTTCCTCAGCGAGAGTCTCATGTGGCACATCTCATCCCAAGTTGCAGAACTGAAGAAACTTGTGGTGGACAATGTGGAGGTTTTAACCCAGATGAGGACCAGCTTTGACAAGCCGGACCATATGGCAGCACTCTTTAAGAGGCTAACATCGGTTGACAGCGTGCTGAAACGGATGACCATCATTGGTGTGATTTTGTCGTTCCGCTCTCTGGCTCAGGAAGCTCTCCGAGATGTGCTCTCTTGCCACATTCCCTTCCTGGTGAGCTCCGTTGAAGACTTTAAAGATCACATTCCTCGTGAAACTGACATGAAGGTGGCCATGAACGTGTACGAGCTGTCTTCTGCTGCAGGCCTGCCCTGTGAGATCGACCCTGCTCTAGTAGTGGCGCTGTCATCCCAGAAGTCTGGTAACCCGGAGGAAGAGTACAAGATCGCCTGCCTGTTGATGGTCTTCGTGGCCGTTTCCATGCCGACCCTGGCCAGCAACGTGATGTCACAGTACAGTCCCGCAATAGAAGGTCACTGCAACAACATTCACTGTCTGGCTAAAGCGATAAACCAGATTGCCGCCGCTCTGTTCACGATCCACAAGGGCAGCATAGAGGATCGCCTCAAAGAATTCCTCGCCCTCGCCTCCTCCAGCCTGCTGAAGATTGGACAGGAGACGGATAAAACCACTACACGGAACAGAGAGTCTGTTTACCTGCTCCTGGACATGATCGTTCAAGAATCGCCATTCCTCACCATGGACCTGTTGGAGTCCTGCTTTCCATACGTCCTGCTCCGAAACGCCTATCACGCCGTATACAAGCAGTCGGTATCTTCTTCAGCATAAGAGCACTCCAGGAGCAGATACTTCAACTCTCATTCCATATTCCTCCGTAGGATTCTCCGATGCTATAGTCTTACAAGACTTTCGATGGGATCAAAACTTTTATGACACTGAATAAAGAGGGAAAAATggcaaacaaaataattataataatttgtatATTGACCACTTACAATAATCAAGTTTGATCCCAGGGACTAGTGACACTAAGTATCATTTTTGACCATTTCTTTTGGTTTGTGTTTTAATTTGCAATGGTTAAACttggaaacaaacacattaaatagTTAATTGTGAGTGTTGGGATGTGGGGGGGAGGGCAGGGGTGAATTGTTAAAAACTACATGATGCTAAATGCTTGTTCTGATAACAGATGCCTCTATGAAAcagtgatttttcttttctttttcttttttggatgtTGTTCTAGATCTAATCTGTGTGGGTTACTGcgtgcttctctctctctctctccctccctgtgaatttgcattttattttcatgACACTTTGTGTTCCTTTTACATACTTGCCAAATTAATGGATATAACAGCATCTCATTCGGATTGAAACGGCAGAATTGTGCATAACTACATGTTATAAAAGCAACCTAGTGTTGTTTGTACAAAGCATAGTATAATTTTTTAACTAACTTTCATGATGCCTTGTGGCATTGACACTCCATTGTACCCGTCTGTGAGCTATAATAAACATTCATACATATTTATTGAATGTTTATCAGTCGTTTCCCCCACTTCCTCCTCTCCCTTAACCGGTTTTTATATGTTTTGGATTTTTTGGAAATGACAATGTATCTTCCATAACATGAATAAACATCAGGTCATATATGGTTTGAGTGGTTTACTTTAATGTTGTTAAGTGGTGTATTTTTTATATCATAATAAAAAACTGCGGATTATGA
>TCONS_00073579
GCCTCGTTCTGGCCGTCAGGGCAacacctagaaaaaaaaaatacatccccGACGACGCGCCTGAAGCCCCTAACATGGGCGAATTTTAACACTAAAAACCGACTCATTTTTGCACCTTACCCTATAACACTACACAAGGAATCCTTTCGGTTGCGATTAAGCTCGTTTTGACGGTCGTTTGAGCCATGTCTCGGGGCGCGATGCAGCCGAGCCAGCAGAAGCTGGCGGAGAAATTGACGATCCTCAACGACCGCGGCATCGGGATGCTCACTCGCATCTACAACATCAAAAAGGCCTGTGGAGATCCCAAGGCAAAGCCTTCCTACCTGATTGACAAAAACCTGGAGTCAGCCGTGAAATTCATTGTCAGAAAATTCCCAGCCGTTGAGACCCGCAACAACAATCTTGCACAACTACaaaaagaaaagtcagaaataCTGAAGAATTTAGCTCTATATTACTTCACCTTTGTGGACGTTATGGAATTTAAGGACCACGTTTGTGAACTGCTGAACACTATTGATGCTTGTCAAGTTTTCTTTGACATTACTGTAAATTTTGACCTCACAAAGAACTACCTGGACTTGGTAGTGACGTACACTACCCTGATGTTGCTGCTTTCCCGAATTGAAGAGCGCAAAGCGATAATCGGCCTCTACAACTATGCCCATGAAATGACACACGGTTCAAGCGATCGAGAATACCCCAGGCTTGGACAGATGATTGTGGATTACGAGAACCCACTAAAAAAGATGATGGAGGAGTTTGTCCCTCATGGAAAATCGCTGTCAGATGCGCTGGTCTCCTTGCAGATGGTGTACCCACGCCGGAATCTGTCTGCAGATCAGTGGAGAAACGCTCAGCTGCTCAGTTTGATTAGCGCTCCCAGCACTATGCTCAACCCAGCTCAATCTGACACG
>TCONS_00073580
aaaaaaaaaatacatccccGACGACGCGCCTGAAGCCCCTAACATGGGCGAATTTTAACACTAAAAACCGACTCATTTTTGCACCTTACCCTATAACACTACACAAGGAATCCTTTCGGTTGCGATTAAGCTCGTTTTGACGGTCGTTTGAGCCATGTCTCGGGGCGCGATGCAGCCGAGCCAGCAGAAGCTGGCGGAGAAATTGACGATCCTCAACGACCGCGGCATCGGGATGCTCACTCGCATCTACAACATCAAAAAGGCCTGTGGAGATCCCAAGGCAAAGCCTTCCTACCTGATTGACAAAAACCTGGAGTCAGCCGTGAAATTCATTGTCAGAAAATTCCCAGCCGTTGAGACCCGCAACAACAATCAACAGCTTGCACAACTACaaaaagaaaagtcagaaataCTGAAGAATTTAGCTCTATATTACTTCACCTTTGTGGACGTTATGGAATTTAAGGACCACGTTTGTGAACTGCTGAACACTATTGATGCTTGTCAAGTTTTCTTTGACATTACTGTAAATTTTGACCTCACAAAGAACTACCTGGACTTGGTAGTGACGTACACTACCCTGATGTTGCTGCTTTCCCGAATTGAAGAGCGCAAAGCGATAATCGGCCTCTACAACTATGCCCATGAAATGACACACGGTTCAAGCGATCGAGAATACCCCAGGCTTGGACAGATGATTGTGGATTACGAGAACCCACTAAAAAAGATGATGGAGGAGTTTGTCCCTCATGGAAAATCGCTGTCAGATGCGCTGGTCTCCTTGCAGATGGTGTACCCACGCCGGAATCTGTCTGCAGATCAGTGGAGAAACGCTCAGCTGCTCAGTTTGATTAGCGCTCCCAGCACTATGCTCAACCCAGCTCAATCTGACACGatgCCCTGTGAATACCTATCCTTGGACACCATGGAGAAATGGATCGTCTTCGGCTTCATCTTGTGTCATGCGGCTCTGAACAGTGATCCTGCGGCTCTCAGTCTTTGGAAGTTGGCCCTTCAGAGCAGTACCTGTCTCTGTCTGTTCAGGGACGAGGTCTTCCACATTCACAAAGCTGCAGAGGATCTCTTCGTAAACATTCGCGGTTACAACAAACGTGTCAATGATATTCGTGAATGCAAAGAATCTGCTCTTTCACATGCGGGCTCAATGCACAGAGAACGACGTAAGTTCTTGAGGTCTGCCCTGAAAGAGCTAGCCACAGTACTGGCAGATCAGCCTGGATTGCTGGGTCCGAAGGCTCTGTTTGTGTTCATGGCACTCTCCTTCGCCCGTGATGAGATCATTTGGCTGCTCAGACATGCCGACAACATCCAAAAGAAAAGCACAGATGACTTCATTGACAAgcACATTGCAGAGTTGATCTTCTACATGGAGGAGTTGAGGGCTCACGTCCGAAAGTACGGGCCGGTGATGCAGAGGTACTATGTTCAGTACCTGTCCGGCTTTGACGCGGTGGTGCTCAATGAGCTTGTACAGAACCTGTCCGTGTGCCCAGAGGACGAGTCCATCATAATGTCGTCCTTCGTGAACACTATGACCTCTCTCAGTGTTAAACAAGttgAAGATGGCGAAGTGTTTGATTTCAGAGGGATGAGGCTGGACTGGTTCAGACTTCAGGCCTACACCAGCGTGTCCAAGGCTTCGTTGGGACTGGCAGATCACAGAGAACTGGGAAAGATGATGAACACCATCATCTTCCACACTAAGATGGTGGACTCTCTGGTGGAGATGCTTGTGGAGACTTCTGACCTGTCCATATTCTGTTTTTACAGCCGCGCCTTTGAAAAGATGTTCCAGCAGTGTCTTGAACTGCCGTCCCAGTCTCGATACTCCATCTCCTTCCCACTGCTCTGCACCCACTTTATGAGCTGCACTCATGAGCTCTGCCCTGAAGAGAGGCACCACATCGGAGACCGCAGCCTGTCCCTTTGCAACATGTTCCTGGACGAGATGGCCAAGCAAGCCCGCAACCTCATCACAGACATATGCACAGAGCAGTGCACCCTGAGCGACCAGCTACTGCCAAAACATTGTGCCAAAACCATCAGTCAGGCCGTGAACAAGAAGTCGAAAAAGCAGACAGGGAAGAAGGGTGAACCGGAGCGAGAAAAACCTGGCGTGGAGAGCATGAGGAAGAACAGACTCCTGGTCACCAATCTGGATAAACTGCACACTGCTCTGTCCGAGCTCTGCTTCTCCATCAACTACGTCCCCAACATGATGGTCTGGGAGCACACCTTCACCCCACGCGAGTACCTGACCTCCCACCTGGAGATTCGCTTCACTAAGTCTATAGTCGGGATGACCATGTACAACCAGACAACACAGGAGATCGCCAAACCATCAGAGCTGCTCACCAGCGTCCGGGCCTACATGACAGTGCTGCAGTCCATTGAGAATTATGTGCAGATTGACATCACCAGAGTCTTCAACAATGTGCTGCTGCAGCAAACCCAACACCTGGACAGCCACGGAGAGCCAACCATCACCAGCCTCTACACTAACTGGTATCTGGAGACTTTACTGCGGCAGGTCAGCAACGGTCACATCGCGTACTTTCCTGCGATGAAAGCCTTCGTCAACTTGCCCACGGAGAATGAGCTGACCTTCAACGCAGAGGAGTATTCTGACATTTCTGaAATGCGCTCTCTGTCGGAGCTGCTGGGTCCATATGGGATGAAGTTCCTCAGCGAGAGTCTCATGTGGCACATCTCATCCCAAGTTGCAGAACTGAAGAAACTTGTGGTGGACAATGTGGAGGTTTTAACCCAGATGAGGACCAGCTTTGACAAGCCGGACCATATGGCAGCACTCTTTAAGAGGCTAACATCGGTTGACAGCGTGCTGAAACGGATGACCATCATTGGTGTGATTTTGTCGTTCCGCTCTCTGGCTCAGGAAGCTCTCCGAGATGTGCTCTCTTGCCACATTCCCTTCCTGGTGAGCTCCGTTGAAGACTTTAAAGATCACATTCCTCGTGAAACTGACATGAAGGTGGCCATGAACGTGTACGAGCTGTCTTCTGCTGCAGGCCTGCCCTGTGAGATCGACCCTGCTCTAGTAGTGGCGCTGTCATCCCAGAAGTCTGAAAATATTAGCCCGGAGGAAGAGTACAAGATCGCCTGCCTGTTGATGGTCTTCGTGGCCGTTTCCATGCCGACCCTGGCCAGCAACGTGATGTCACAGTACAGTCCCGCAATAGAAGGTCACTGCAACAACATTCACTGTCTGGCTAAAGCGATAAACCAGATTGCCGCCGCTCTGTTCACGATCCACAAGGGCAGCATAGAGGATCGCCTCAAAGAATTCCTCGCCCTCGCCTCCTCCAGCCTGCTGAAGATTGGACAGGAGACGGATAAAACCACTACACGGAACAGAGAGTCTGTTTACCTGCTCCTGGACATGATCGTTCAAGAATCGCCATTCCTCACCATGGACCTGTTGGAGTCCTGCTTTCCATACGTCCTGCTCCGAAACGCCTATCACGCCGTATACAAGCAGTCGGTATCTTCTTCAGCATAAGAGCACTCCAGGAGCAGATACTTCAACTCTCATTCCATATTCCTCCGTAGGATTCTCCGATGCTATAGTCTTACAAGACTTTCGATGGGATCAAAACTTTTATGACACTGAATAAAGAGGGAAAAATggcaaacaaaataattataataatttgtatATTGACCACTTACAATAATCAAGTTTGATCCCAGGGACTAGTGACACTAAGTATCATTTTTGACCATTTCTTTTGGTTTGTGTTTTAATTTGCAATGGTTAAACttggaaacaaacacattaaatagTTAATTGTGAGTGTTGGGATGTGGGGGGGAGGGCAGGGGTGAATTGTTAAAAACTACATGATGCTAAATGCTTGTTCTGATAACAGATGCCTCTATGAAAcagtgatttttcttttctttttcttttttggatgtTGTTCTAGATCTAATCTGTGTGGGTTACTGcgtgcttctctctctctctctccctccctgtgaatttgcattttattttcatgACACTTTGTGTTCCTTTTACATACTTGCCAAATTAATGGATATAACAGCATCTCATTCGGATTGAAACGGCAGAATTGTGCATAACTACATGTTATAAAAGCAACCTAGTGTTGTTTGTACAAAGCATAGTATAATTTTTTAACTAACTTTCATGATGCCTTGTGGCATTGACACTCCATTGTACCCGTCTGTGAGCTATAATAAACATTCATACATATTTATTGAATGTTTATCAGTCGTTTCCCCCACTTCCTCCTCTCCCTTAACCGGTTTTTATATGTTTTGGATTTTTTGGAAATGACAATGTATCTTCCATAACATGAATAAACATCAGGTCATATA

Function

symbol description
nckap1 Acts upstream of or within neuron projection morphogenesis. Predicted to be located in lamellipodium membrane. Predicted to be integral component of membrane. Orthologous to human NCKAP1 (NCK associated protein 1).

GO:

id name namespace
GO:0048812 neuron projection morphogenesis biological_process
GO:0031258 lamellipodium membrane cellular_component
GO:0042995 cell projection cellular_component
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005515 protein binding molecular_function

KEGG:

id description
ko04810 Regulation of actin cytoskeleton
ko05130 Pathogenic Escherichia coli infection
ko05132 Salmonella infection

ZFIN:

id description
ZDB-GENE-030131-4426 Acts upstream of or within neuron projection morphogenesis. Predicted to be located in lamellipodium membrane. Predicted to be integral component of membrane. Orthologous to human NCKAP1 (NCK associated protein 1).

Ensembl:

ensembl_id ENSDARG00000060853

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073577 False 4018 mRNA 0.49 31 44721808 44824500
TCONS_00073578 False 4510 mRNA 0.47 30 44722205 44825419
TCONS_00073579 False 920 mRNA 0.47 7 44722236 44757162
TCONS_00073580 True 4386 mRNA 0.47 30 44722267 44825345

Neighbor

gene id symbol gene type direction distance location
XLOC_037393 ppp1r1c coding upstream 231830 44430705 ~ 44489978 (+)
XLOC_037394 NA coding upstream 265700 44455143 ~ 44456108 (+)
XLOC_037392 itprid2 coding upstream 301428 44391254 ~ 44420380 (+)
XLOC_037391 itprid2 coding upstream 351951 44304980 ~ 44369857 (+)
XLOC_037390 itga4 coding upstream 633741 44034790 ~ 44088067 (+)
XLOC_037396 frzb coding downstream 6613 44832032 ~ 44839148 (+)
XLOC_037397 BX571855.1 coding downstream 106756 44932175 ~ 44932293 (+)
XLOC_037398 retsatl coding downstream 168795 44994214 ~ 44998722 (+)
XLOC_037399 NA coding downstream 214346 45039765 ~ 45044991 (+)
XLOC_037400 BX510317.1 coding downstream 238736 45064155 ~ 45064269 (+)
XLOC_037389 BX649590.1 non-coding upstream 866198 43855495 ~ 43855610 (+)
XLOC_037387 BX470133.1 non-coding upstream 946443 43775251 ~ 43775365 (+)
XLOC_037386 CU855879.1 non-coding upstream 1390297 43331395 ~ 43331511 (+)
XLOC_037385 NA non-coding upstream 1816186 42732199 ~ 42905622 (+)
XLOC_037401 NA non-coding downstream 287077 45112496 ~ 45122990 (+)
XLOC_037403 NA non-coding downstream 435965 45261384 ~ 45261761 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00001072 nckap1,LOC107739442,LOC107699024 coding CM030137.1 CM030137.1 13806213 ~ 13820006 (-)