LOC110503093


Basic Information

Item Value
gene id LOC110503093
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 25703256 ~ 25704420 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110503093
AGTGAGTTATAATTTTGAGACTAAAATCACGTTGATTGTTGTCTCAGTTGGATGTTAGAGACAATGTGTCCCCCTGACTGGACTCCTTTGATGAGGGTGTCAGCAGTCAGTGGAACCCAGCGgtggcctctctcctcatcagaGCCGGGGCTGATGTCAACACCAGGACAAGGATGGGAAGACGCCACTTATGGTGGCAGTGTTGAACCCCCACGAGTTGCTGGTGCAGTTGTTGTTGGACAGGGCCGACCACGATGTGAAGAACGAGTTTGGGCCAGGGGCAGCTGAAATAGCAAAGGCCTTTGGGAGAGAGAATTTCATCAGTTTGTTAGAAGGACAGAAGAGTATCGTCAGAGATGGTACAGTCCATTAGTAAAGGGCTTAGGTGGACAGCGTAATTTTTCCCCCTAAATTCTAAAAGCTTTATTATCgttgcttattttttttaacacattgtatgtatgtatctaAACCTGCATTTTTACCTGGATATTTGTTTTGCGTAACAAAAGTTTTAACTGTGTGAGATTTTTATGGATAAATGAAATAATAAACCATCAAGAATAACCTCAAGACACAAAGGATTGACTTGGTTTCGCTTTACTGTACAGATGTCTGATGAAACCTCATCCTACGAGAGGGAGACACATTTCACATTGCTGTGCCAATGAGTCATGTAAAATTATTTGGAATAATGTGTTTGTGTCAAGTCTTCTGCCTACATTCGCCTGGACAGTCAGCAAAATAAACGCATTTAAATCAAATGAACAGCATAAGAGAAATCTCATTTATTTGGCTCTGCAATAATGTTCAAGTACTccaactgctccagaatccaatctTTTACCATAATCCTCATTCCAAATGgagttcaataaaaaaaaaa

Function

NR:

description
PREDICTED: fibronectin type 3 and ankyrin repeat domains protein 1 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110503093 True 886 mRNA 0.41 4 25703256 25704420

Neighbor

gene id symbol gene type direction distance location
LOC110503059 NA coding downstream 284657 25417364 ~ 25418599 (-)
LOC110502487 LOC106607391 coding downstream 510931 25131256 ~ 25192325 (-)
gnrh1 gnrh1 coding downstream 574305 25127611 ~ 25128951 (-)
LOC118943844 NA coding downstream 857052 24839909 ~ 24846204 (-)
LOC110502483 LOC106607298 coding downstream 889898 24806973 ~ 24813358 (-)
LOC110503094 edrf1 coding upstream 24068 25728488 ~ 25735408 (-)
LOC110502495 zranb1 coding upstream 180536 25884956 ~ 25932474 (-)
LOC110502496 fam175b coding upstream 235306 25939726 ~ 25947986 (-)
LOC110502501 gpr26 coding upstream 522210 26226630 ~ 26230546 (-)
LOC110502502 hmx2 coding upstream 689813 26387522 ~ 26398133 (-)
G1846928 NA non-coding downstream 179891 25523085 ~ 25523365 (-)
G1846927 NA non-coding downstream 180340 25522270 ~ 25522916 (-)
G1846901 NA non-coding downstream 197358 25505670 ~ 25505898 (-)
G1846868 NA non-coding downstream 251671 25451335 ~ 25451585 (-)
G1846866 NA non-coding downstream 254826 25448160 ~ 25448430 (-)
G1847409 NA non-coding upstream 60568 25764988 ~ 25818675 (-)
G1847511 NA non-coding upstream 195576 25899996 ~ 25905382 (-)
G1847576 NA non-coding upstream 310403 26014823 ~ 26015088 (-)
G1847579 NA non-coding upstream 311491 26015911 ~ 26016597 (-)
G1846858 NA other downstream 262869 25439807 ~ 25440387 (-)
LOC110502462 LOC106607169 other downstream 2357485 23344353 ~ 23358461 (-)
G1843946 NA other downstream 2469833 23182987 ~ 23233423 (-)
LOC110502461 LOC106607165 other downstream 2484986 23213905 ~ 23218749 (-)
G1841959 NA other downstream 4331457 21345514 ~ 21371799 (-)
G1850441 NA other upstream 2370505 28074925 ~ 28078251 (-)
LOC110502553 NA other upstream 3220319 28919846 ~ 28932600 (-)
LOC110502574 LOC106608078 other upstream 5447189 31151609 ~ 31239202 (-)
G1854905 NA other upstream 5513177 31217597 ~ 31218171 (-)
G1855326 NA other upstream 6275577 31979997 ~ 31981333 (-)

Expression


Co-expression Network