LOC110502495 (zranb1)


Basic Information

Item Value
gene id LOC110502495
gene name zranb1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 25884956 ~ 25932474 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021580551.2
GCTCCGGGAATGGGGTGTAATGTAATATTCCGTGGTACATAATTTAAGCCAAGACTGCAGAAATTAATTACGGTTTCATATTATTTTGACTTCAGAGACGGCTAAAATAAAGCCACAGGTATAACAAAGAGTTATACATATTTGATTAAGCTTGTTAACTATTGGCAACGAACGACGTATTGCATAGCAAACAGGAGGAATATAAAAAAACGATCCAATTAGTTTGCCCGTTGAATCCAGGTGATAAATCCTTCTGCTTCTCTCTGGAGTGTATTTTTTTTCCAGTGTCCCCCCCACGCCGCCATTAAAAACCGACAGAACGGTGGTTGAAATTTGGGATTAAAAATATTTAAAGCCCTGGAGAGACTGCATCGGGGTTGTTGTTCTATTGCACAGGTCTCGGAGCTACGTACAAACGGAAACTTAAATATGTGTATTTTGACCAAATGAAAGCTTGACTTCGGGACATACAGATTGGGTTTCGTTGGGAAAGCGCGAGCGATATAACGTTAATGTTGGACTGAAGCTCAAGAGCGGTTTGTTGTGGTTGCGCGTTGGAGTGTAAACACAGGAAAAGCATCCTGCTTGCCTGTGTGATCTCCTTGAGTGAAGCTGCCAACCAGAGTCCCTCCCAGCAGCAGCCATCACCCAGCGGTGGAGTGACGATGACTGAGCTGGGTGCCAAGTGGGCCTGTGAGTACTGCACGTTTGAGAACTGGCCTTCTGCCATCAAGTGCACCATGTGCCGCGCCCAGAGGCCCAGTGGGGGTGCCATCATCACCGAGGAGCCCTTTCGGAGCACCCCTGGCCTGGACTCCAGCCACCAGTGGGAACGTCTGAGTCACAGCAACAACCCACCCCAGGGAGGCTCCAGTCTCCTAATCTGCCCGGACTCCAGTGCCCGCCCCCGTGTCCGCATCACAGATTCCCCCGAGCCCCCCTCCAGCAAATGGTCCTGCCATATGTGCACCTACTTAAACTGGCCCTGTGCCATTCGCTGCACTCAGTGTCTGTGCCAGCGGCATCAGGGacatcagcaggagcagcgccaCCAGGGGCTGGCACAGCAGCCACGCATTTCCACCGAGTCACCCCAGACCTCAGGCTCAGGATGCCGACCCACACCCCCATCCACCCCTACGGACCCCTGCGAGGAGTATAACGACCGCAACCGCCTCAACACCCATGCCCAGCACTGGACCTGTGCCTCCTGCACTTATGCAAACTGGCCTAAAGCGTGCAAATGTGTGGTGTGTGACCACTCCAGGCACAAGAGCTTGGCAAAACCCATCGAACTGGCCTTGAAGCCCGAGAACCTACCACCCTCCATACTCAACGAGCAGGACAGTGACAACAGGAGGGGGGGGTTGGGAAGGGGCGGAAGTGGAGTAGTGGGGTGCTGCGGCAGCCAGAGGAGGTCCCCGCCCACCTCCAAGCGGGAGGTGGAGGCTAAAATGGACTTTCAGAGGAACGAGCTGGCATTGGGAGCCGGAATTGGGAGCATAGAGGAGCGGCAGGTGGACTTTAAGAGGCTTAAACAGATGAAGAACAGGATGAGGAGGACTGACTGGTTGTTTCTCAATGCTTGTGCAGGTGTGGTAGAGGGGGACCTGGCTGCAGTAGAGGCCTATAAATCGTCAGGGGGGGACATCGCCAGGCAGCTGACGTCCGACGAGGTGCGCCTTCTCAACCGGCCCTCGGCCTTTGACGACGGCTTCACCCTGGTCCACCTGGCCATCCGCTTCCAGAGGAAGGACATGCTGGCCGTGCTCCTCACTGAGgTGTCCCAGCAGGCAGCTAAGTGTATCCCAGCCATGGTGTGTCCTGAGCTGACGGAGCAGATCCGTCGTGAGGTGGCTGCCTCCCTGCACCAGCGCAAGGGAGAATTCACCTGCTACTTTCTCACTGACCTGGTCACCTTCACCCTGCCAGCAGATATCGAGGACTTGCCCCCAACAGTTCAGGAGAAACTGTTTGACGAGGTGCTAGACCGAGATGTACAGAAAGagCTGGAGGAGGAATCTCCTATCATCAACTGGTCTATAGAGCTAGGCACGCGGTTGGACAGCAGGCTGTATGCCCTGTGGAACCGCACGGCTGGGGACTGCCTGTTAGACTCAGTATTGCAGGCCACCTGGGGCATCTATGACAAGGACTCTGTCCTCCGCAAGACCCTTCACGACACTCTGCACGACTGCTCCCACTGgtTCTACACGCGCTGGAAGGAGTGGGAGTCGTGGTATTCCCAAAGCTTCGGCTTGCACTTCTCACTCAGAGAGCAACAGTGGCAGGAAGACTGGGCTTTCATCCTCTCACTGGCCAGCCagccTGGAGCCAGCCTGGAGCAGACTCATATTTTTGTTCTTGCACACATTCTTCGTAGACCAATCATCGTCTATGGAGTGAAGTATTACAAAAGTTTCCGTGGTGAAACACTTGGGTACACCCGTTTTCAAGGTGTGTACTTGCCCCTGCTGTGGGAGAAGAGTTTCTGTTGGAAGAGTCCCATTGCTCTGGGCTACACGCGCGGCCACTTCTCTGCACTGGTGGCCATGGAGAATGACGGCTTCAACAATCGGGGCGCAGGCGCCAACCTCAATACAGACGATGATGTCACCATCACCTTCCTACCGCTGGTGGACAGTGAGAGAAAGTTGCTCCACATCCACTTCCTCTCAGCACAGGAGATGGGGAacgaggagcagcaggagaagctgTTGAGGGAGTGGTTGGACTGCTGCGTGACAGAGGGTGGAGTGCTGGTGGCCATGCAGAAGAGCTCCCGCCGGCGGAACCACCCCCTGGTAACACAGATGGTAGAGAAGTGGCTGGACGGCTACCGACAGATCCGCCCCTGTGCCTCGCTCTCCGacggtgaggaagaggaggaggatgatgaatgACAACTGGAGTAGTCAGGAGTCCACCCTCTTTTACTTACATGGACAAACTGTGAAAGGGCAGGGAATCACCGTACCCTGGCAGAGGACACACATAAGAGACTGACAGAAGAAAAACTTGGGGATGACAGAAATAAAGGATTGTAGATTTCAAACGCTAATGATCTTCTCAAATGTAAATGCATGTGGTTGTTTAAAAAAGTATAAGGAAATATACCAGTATCGGTTTATGATGGGCATCGATGAAAGTACACTTCCTAAATGACTGTCCTTTTTAGTCGTTTTTCCAGGTGAAATAGTTCTTGTTTTTTGACGGGCATGGTCTAGGCCAACATATCTTTGTCAGGGCACCCAACAGAAAACTGCTGCAATTGTGTACTATGAATTTAattcttaaagggatacttcaggattttgtcaacaaagccctttatctacttccccagagtcagatgaacccATGGGAGATACCATTTGTCTCTGTATccaggaagttagaggtagtttcgcaagccaatcctaactagcattagcgcagtGAATGGTATCTACTAGCAGTTATCATAGGCTttgtcattgtgctaatgctcgTTAGCAACTTCATTCAAATGCAGGGACAAATGGTATCCACGGGTTcatctggggaagtagataaagggtttCATTGACAATCCCCTTAGTAACCCTTTTAAAACTAAGCACTACACATTTGACTAACTGCTTGAATGAAGGTCATTTTCAAAGCTACATAAATGAAGTTCCCTTCTCACCTCAAAGCTAGTGTCACTAAGGTCTTGGAGATCATACACATTGGTGTTTAGTTTACCCTTTTCCCCAGAATGAAGTATTTTCTTGATCTCAACTAATTCTCCTTATGTTTGGGAGCTTTTGAGCCGAGATTGTCGTTTTGTCATTTCTTTCAATCTTGATGTTTTGTGGCAGACCTTTTTGCTGTGAGGAAAATAACCATCTGTGGAAGTTTACTTCAGCACCTCATGTTTGGTGCTTTGGAGGAGTGTGAGTAAGTCACATTCAACGTCTACATTAAAACAATTATCAAGTTTCTTTTTCTCTGTCAAGTTAAACCCATGGTACCTGTGTTTTTTTCCTATAATGTATGCTTCTTGTCTATGTGAACCCATCTTGAATTAAGGTATTTGTGAGACTGCACATGAACCAAAGTTAAAATATCATGGTCATACTTTTTTGTTGGGTTTCCTTGCCATTGAGTTGTACTGTAACTTATTTTGGTGTATTACAATTAGGTATATACA
>XM_036960039.1
GGCTCCGGGAATGGGGTGTAATGTAATATTCCGTGGTACATAATTTAAGCCAAGACTGCAGAAATTAATTACGGTTTCATATTATTTTGACTTCAGAGACGGCTAAAATAAAGCCACAGGTATAACAAAGAGTTATACATATTTGATTAAGCTTGTTAACTATTGGCAACGAACGACGTATTGCATAGCAAACAGGAGGAATATAAAAAAACGATCCAATTAGTTTGCCCGTTGAATCCAGGTGATAAATCCTTCTGCTTCTCTCTGGAGTGTATTTTTTTTCCAGTGTCCCCCCCACGCCGCCATTAAAAACCGACAGAACGGTGGTTGAAATTTGGGATTAAAAATATTTAAAGCCCTGGAGAGACTGCATCGGGGTTGTTGTTCTATTGCACAGGTCTCGGAGCTACGTACAAACGGAAACTTAAATATGTGTATTTTGACCAAATGAAAGCTTGACTTCGGGACATACAGATTGGGTTTCGTTGGGAAAGCGCGAGCGATATAACGTTAATGTTGGACTGAAGCTCAAGAGCGGTTTGTTGTGGTTGCGCGTTGGAGTGTAAACACAGGAAAAGCATCCTGCTTGCCTGTGTGATCTCCTTGAGTGAAGCTGCCAACCAGAGTCCCTCCCAGCAGCAGCCATCACCCAGCGGTGGAGTGACGATGACTGAGCTGGGTGCCAAGTGGGCCTGTGAGTACTGCACGTTTGAGAACTGGCCTTCTGCCATCAAGTGCACCATGTGCCGCGCCCAGAGGCCCAGTGGGGGTGCCATCATCACCGAGGAGCCCTTTCGGAGCACCCCTGGCCTGGACTCCAGCCACCAGTGGGAACGTCTGAGTCACAGCAACAACCCACCCCAGGGAGGCTCCAGTCTCCTAATCTGCCCGGACTCCAGTGCCCGCCCCCGTGTCCGCATCACAGATTCCCCCGAGCCCCCCTCCAGCAAATGGTCCTGCCATATGTGCACCTACTTAAACTGGCCCTGTGCCATTCGCTGCACTCAGTGTCTGTGCCAGCGGCATCAGGGacatcagcaggagcagcgccaCCAGGGGCTGGCACAGCAGCCACGCATTTCCACCGAGTCACCCCAGACCTCAGGCTCAGGATGCCGACCCACACCCCCATCCACCCCTACGGACCCCTGCGAGGAGTATAACGACCGCAACCGCCTCAACACCCATGCCCAGCACTGGACCTGTGCCTCCTGCACTTATGCAAACTGGCCTAAAGCGTGCAAATGTGTGGTGTGTGACCACTCCAGGCACAAGAGCTTGGCAAAACCCATCGAACTGGCCTTGAAGCCCGAGAACCTACCACCCTCCATACTCAACGAGCAGGACAGTGACAACAGGAGGGGGGGGTTGGGAAGGGGCGGAAGTGGAGTAGTGGGGTGCTGCGGCAGCCAGAGGAGGTCCCCGCCCACCTCCAAGCGGGAGGTGGAGGCTAAAATGGACTTTCAGAGGAACGAGCTGGCATTGGGAGCCGGAATTGGGAGCATAGAGGAGCGGCAGGTGGACTTTAAGAGGCTTAAACAGATGAAGAACAGGATGAGGAGGACTGACTGGTTGTTTCTCAATGCTTGTGCAGGTGTGGTAGAGGGGGACCTGGCTGCAGTAGAGGCCTATAAATCGTCAGGGGGGGACATCGCCAGGCAGCTGACGTCCGACGAGGTGCGCCTTCTCAACCGGCCCTCGGCCTTTGACGACGGCTTCACCCTGGTCCACCTGGCCATCCGCTTCCAGAGGAAGGACATGCTGGCCGTGCTCCTCACTGAGgTGTCCCAGCAGGCAGCTAAGTGTATCCCAGCCATGGTGTGTCCTGAGCTGACGGAGCAGATCCGTCGTGAGGTGGCTGCCTCCCTGCACCAGCGCAAGGGAGAATTCACCTGCTACTTTCTCACTGACCTGGTCACCTTCACCCTGCCAGCAGATATCGAGGACTTGCCCCCAACAGTTCAGGAGAAACTGTTTGACGAGGTGCTAGACCGAGATGTACAGAAAGcctcactttctctctcagagCTGGAGGAGGAATCTCCTATCATCAACTGGTCTATAGAGCTAGGCACGCGGTTGGACAGCAGGCTGTATGCCCTGTGGAACCGCACGGCTGGGGACTGCCTGTTAGACTCAGTATTGCAGGCCACCTGGGGCATCTATGACAAGGACTCTGTCCTCCGCAAGACCCTTCACGACACTCTGCACGACTGCTCCCACTGgtTCTACACGCGCTGGAAGGAGTGGGAGTCGTGGTATTCCCAAAGCTTCGGCTTGCACTTCTCACTCAGAGAGCAACAGTGGCAGGAAGACTGGGCTTTCATCCTCTCACTGGCCAGCCagccTGGAGCCAGCCTGGAGCAGACTCATATTTTTGTTCTTGCACACATTCTTCGTAGACCAATCATCGTCTATGGAGTGAAGTATTACAAAAGTTTCCGTGGTGAAACACTTGGGTACACCCGTTTTCAAGGTGTGTACTTGCCCCTGCTGTGGGAGAAGAGTTTCTGTTGGAAGAGTCCCATTGCTCTGGGCTACACGCGCGGCCACTTCTCTGCACTGGTGGCCATGGAGAATGACGGCTTCAACAATCGGGGCGCAGGCGCCAACCTCAATACAGACGATGATGTCACCATCACCTTCCTACCGCTGGTGGACAGTGAGAGAAAGTTGCTCCACATCCACTTCCTCTCAGCACAGGAGATGGGGAacgaggagcagcaggagaagctgTTGAGGGAGTGGTTGGACTGCTGCGTGACAGAGGGTGGAGTGCTGGTGGCCATGCAGAAGAGCTCCCGCCGGCGGAACCACCCCCTGGTAACACAGATGGTAGAGAAGTGGCTGGACGGCTACCGACAGATCCGCCCCTGTGCCTCGCTCTCCGacggtgaggaagaggaggaggatgatgaatgACAACTGGAGTAGTCAGGAGTCCACCCTCTTTTACTTACATGGACAAACTGTGAAAGGGCAGGGAATCACCGTACCCTGGCAGAGGACACACATAAGAGACTGACAGAAGAAAAACTTGGGGATGACAGAAATAAAGGATTGTAGATTTCAAACGCTAATGATCTTCTCAAATGTAAATGCATGTGGTTGTTTAAAAAAGTATAAGGAAATATACCAGTATCGGTTTATGATGGGCATCGATGAAAGTACACTTCCTAAATGACTGTCCTTTTTAGTCGTTTTTCCAGGTGAAATAGTTCTTGTTTTTTGACGGGCATGGTCTAGGCCAACATATCTTTGTCAGGGCACCCAACAGAAAACTGCTGCAATTGTGTACTATGAATTTAattcttaaagggatacttcaggattttgtcaacaaagccctttatctacttccccagagtcagatgaacccATGGGAGATACCATTTGTCTCTGTATccaggaagttagaggtagtttcgcaagccaatcctaactagcattagcgcagtGAATGGTATCTACTAGCAGTTATCATAGGCTttgtcattgtgctaatgctcgTTAGCAACTTCATTCAAATGCAGGGACAAATGGTATCCACGGGTTcatctggggaagtagataaagggtttCATTGACAATCCCCTTAGTAACCCTTTTAAAACTAAGCACTACACATTTGACTAACTGCTTGAATGAAGGTCATTTTCAAAGCTACATAAATGAAGTTCCCTTCTCACCTCAAAGCTAGTGTCACTAAGGTCTTGGAGATCATACACATTGGTGTTTAGTTTACCCTTTTCCCCAGAATGAAGTATTTTCTTGATCTCAACTAATTCTCCTTATGTTTGGGAGCTTTTGAGCCGAGATTGTCGTTTTGTCATTTCTTTCAATCTTGATGTTTTGTGGCAGACCTTTTTGCTGTGAGGAAAATAACCATCTGTGGAAGTTTACTTCAGCACCTCATGTTTGGTGCTTTGGAGGAGTGTGAGTAAGTCACATTCAACGTCTACATTAAAACAATTATCAAGTTTCTTTTTCTCTGTCAAGTTAAACCCATGGTACCTGTGTTTTTTTCCTATAATGTATGCTTCTTGTCTATGTGAACCCATCTTGAATTAAGGTATTTGTGAGACTGCACATGAACCAAAGTTAAAATATCATGGTCATACTTTTTTGTTGGGTTTCCTTGCCATTGAGTTGTACTGTAACTTATTTTGGTGTATTACAATTAGGTATATACA

Function

symbol description
zranb1 Enables K63-linked polyubiquitin modification-dependent protein binding activity and thiol-dependent deubiquitinase. Involved in several processes, including positive regulation of Wnt signaling pathway; protein deubiquitination; and regulation of cell morphogenesis. Located in cytosol and nucleoplasm.

NR:

description
ubiquitin thioesterase ZRANB1

GO: NA

KEGG:

id description
K11862 ZRANB1, TRABID; ubiquitin thioesterase ZRANB1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021580551.2 False 4174 mRNA 0.50 10 25884956 25932473
XM_036960039.1 True 4193 mRNA 0.50 10 25884956 25932474

Neighbor

gene id symbol gene type direction distance location
LOC110503094 edrf1 coding downstream 149860 25728488 ~ 25735408 (-)
LOC110503093 NA coding downstream 180536 25703256 ~ 25704420 (-)
LOC110503059 NA coding downstream 466357 25417364 ~ 25418599 (-)
LOC110502487 LOC106607391 coding downstream 692631 25131256 ~ 25192325 (-)
gnrh1 gnrh1 coding downstream 756005 25127611 ~ 25128951 (-)
LOC110502496 fam175b coding upstream 7252 25939726 ~ 25947986 (-)
LOC110502501 gpr26 coding upstream 294156 26226630 ~ 26230546 (-)
LOC110502502 hmx2 coding upstream 461759 26387522 ~ 26398133 (-)
LOC110502503 hmx3 coding upstream 471139 26403613 ~ 26406554 (-)
cuzd1.2 LOC106607512 coding upstream 524536 26457010 ~ 26465890 (-)
G1847409 NA non-coding downstream 66281 25764988 ~ 25818675 (-)
G1846928 NA non-coding downstream 361591 25523085 ~ 25523365 (-)
G1846927 NA non-coding downstream 362040 25522270 ~ 25522916 (-)
G1846901 NA non-coding downstream 379058 25505670 ~ 25505898 (-)
G1847576 NA non-coding upstream 82349 26014823 ~ 26015088 (-)
G1847579 NA non-coding upstream 83437 26015911 ~ 26016597 (-)
G1847580 NA non-coding upstream 84986 26017460 ~ 26017691 (-)
G1847581 NA non-coding upstream 85525 26017999 ~ 26018296 (-)
G1847862 NA non-coding upstream 287730 26220204 ~ 26223088 (-)
G1846858 NA other downstream 444569 25439807 ~ 25440387 (-)
LOC110502462 LOC106607169 other downstream 2539185 23344353 ~ 23358461 (-)
G1843946 NA other downstream 2651533 23182987 ~ 23233423 (-)
LOC110502461 LOC106607165 other downstream 2666686 23213905 ~ 23218749 (-)
G1841959 NA other downstream 4513157 21345514 ~ 21371799 (-)
G1850441 NA other upstream 2142451 28074925 ~ 28078251 (-)
LOC110502553 NA other upstream 2992265 28919846 ~ 28932600 (-)
LOC110502574 LOC106608078 other upstream 5219135 31151609 ~ 31239202 (-)
G1854905 NA other upstream 5285123 31217597 ~ 31218171 (-)
G1855326 NA other upstream 6047523 31979997 ~ 31981333 (-)

Expression


Co-expression Network