LOC110502496 (fam175b)


Basic Information

Item Value
gene id LOC110502496
gene name fam175b
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 25939726 ~ 25947986 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021580552.2
caaccggatgcttcatatttatacatccggtgaaacatCTAGGAGGGGTGCTATCATTGAGTTATAGATGGGATGTTTCCATCATGGCGGCATCCATTTCGGGATATACTTTTAGTTCTGTGTGTTATCACAGCGCTAACAGCAACTCTGATCATGAGGGATTCCTTTTAGGAGAAGTTAGGCATGAAGAAACTGTCAGCATCAGTGATACACAGATCAGCAGTTCTGAACTACTCCAAGTAGTAGaagTCCACAATCATGAACCTTGTGCACAGCTATTTAGCTTTTATGATTATGCTGGACAAGTCAATGAAGAGAGTCTTAACAGAATTCTTAAAGACAGACGGAAAAATGTCATCGGCTGGTACAGGTTCAGGAGGAACACGCAGCAGCAGATGTCGTTCAGGGAACAGATCATCCATAAGCAGCTGACCCAGCTGCTAGGAGTGCCTGACCTAGTCTTCCTCCTCTTTAGCTTCATCTCCACAGCCAACAACTCCACACACGCCCTGGAGTATGTGCTGTTCAGACCCAACCGCAGCAGGTACAACCAGAGGGTGACCCTCAGCATCCCAAACCTGGGCAACACCAGCCAGCAGGAATACAAGGTCTCCTCTGTCCCCAACACCTCACTCAACTACGCCAAGGTCATCAAAGAGCATGGGGCTGAATTTTTTGACAAAGATGGTGTGATGAAGGATATCAGAACAATTTTTCAAGTCTACGGTGCACTACAAGATAAAGTGCAATCTGTATGTGGAGAGGTTGAGCAGAGTGAACGTGTGAAAGAGAAAGTCCAGGAGGAGGTGAACAAACTCAAACAGCAAATTGTTCTCAGGAAACGAAAAACCACAGATGAAGAGAGAAGACTCCAGGAAGCGCAGAACCCTGAGCCACGTCTCACTCCTGAGGAGAACACAGAGCCCCCGGAGACCTCCCTCCTGTCCAGAGTGGCCTTCCACACCCCATCCACCCCCGAGCGGCCAGGTCCCTCCGCAAACCCTCCTGCCTACGCAGACCTCCTCTCCTTGCAGAATGACTCACTTCTCCCCTTCTCATCCTCCCCTACCAGTGCTGCGCTGCTCCCCCGGCCCCAGGCTGTGGGCTCCCCAGGCCACCCTTCTCCCAGCCCATTAGGTCTGGGTCTCAGTGCTGGCCCCAACCCTGCTCCTAGCCCTGGTACACCATACCTGGGAAACGGGGACGGATCCAGCTCTGACTCCCTGGACAGACAGGCCGCAGGGcaagaggatgatgaggaggatgatgatgatgacagcaGCGAGTACGAGAACCTTGTGAGCGAGGTGGGGCAGTTGCCCCCAGTTTCTGCCAGTGTGTTGCTGCAGGGCCGCCCAGCCGCCCTCAGTCCGGACGGCGACGCCTCAGTCCGTGGTTCACAGACCTAGTAGATGGGGATGTGGGGGGGCTCAATTAACTGACGCACCGAGATAGGAGGGCGTCCAAACCAATCAAAGATAATTATTCTATATTAGAGGAAGTGCCAGCCCTGAAAATAAAAGGCATGCGCAGGTGGGGTATTCTGCTGTGTATATCTGTTTGTCTTAGTTTTATCTCTTCTGGGGGGAGTATCAAGCTTCATGGGGTTTTACTTTTCTGTCTAGCATGGAAAAGCTAGTCCGTTGGAGCCTGGCTCTCTTCAGTGGATGTGTTTTGATTTAGGGACGGAGGACGTTATAATGGAATAAACGCCAACCGGTTTGTCCGACCTCTCCGTATGGATAGACCCACTCCGCTTTTCCTGGATCATGCTGCGTCACATCTGCATCACCAACTTTAAGCATCCAATTGTACCATTACCTCTTGCACTATTTTTGCTTTCTTTTAACAATTTAAGAAAAGCAAAAGGAAAATGTTCTGCGGCCTTCAAaaccttttctttttttttgtgagaCGGGTGAGattttttttcaatatttttgGGGTGGTGATTTGCTTATTACAAAAAAGAAGAGATGGTGGTGACTGCCAAAGTAATAGAAACACTTGAGAAAGTATATTCaaagcaggtgcttccaaacACAGGTGGGGAACCTGAGTGGCCTGCCAAGCATTATCATCCCATCATGCCTATGGGCATGTATAAAAATGCttggcaggccattattttggctactatGGCTATGCCACCAACCACAGGGCATGAGTTgttactgaatggtttgatgagcatgaaaacaatgtaaaccatattCAATGCTGTCTGTCACCAGACCTCATCCCAATTGAACGCTTATGGGAAattctggagcggtgcctgagacagcatttttCACCACCATCCATGTCGCATCCCTCccaagttccagacacttgtagaatctatgccaaggtgcattgaagctgttctggccccaacgccctattaagtcactttatgttggtgtttccttttatTGTCAGTTATGTATGTAAACTATCATTTCGGTAGCCTGCACGGTTCTAGACACTCAACTTTGAACTGTCATTAGGATTTAATTTCCTTTTAACATCAATGTATTTTTATGAATCATGCGGTTGCCTATTTAGATGACGAAGAATAGTTTTTATTCAAAGTTTTCCTTTGCCACTACTATAATGGGTGCTTATATTATTTTTATGACAACTTTAATGTTACTCTCTCATtcttctataataacactgaAACTGTATGCGCTTTGCTGCACTTAACAAATGTAGTTGATTTATTTTATTGTGCTTTACCAATGCAGTTCAGTTGTGCTACTTGAGTAGTATGCTTTGACCACCTGAGCAGAGCTAGCTCAGCTTTTGCGCATTGTATGGGGTCGACAGGGCGAAAACACAACTTACTGTAGCTTTACTAACCAGACAACTCTGCTGCATCAGAGCTAGCAGTAAACAAGAAACTGCTTCTACATAGACCTGTCTGCTTCTTCCACCTGTTGTCCTTGCACTGCTGG
>XM_021580553.2
caaccggatgcttcatatttatacatccggtgaaacatCTAGGAGGGGTGCTATCATTGAGTTATAGATGGGATGTTTCCATCATGGCGGCATCCATTTCGGGATATACTTTTAGTTCTGTGTGTTATCACAGCGCTAACAGCAACTCTGATCATGAGGGATTCCTTTTAGGAGAAGTTAGGCATGAAGAAACTGTCAGCATCAGTGATACACAGATCAGCAGTTCTGAACTACTCCAAGTAGTAGaagTCCACAATCATGAACCTTGTGCACAGCTATTTAGCTTTTATGATTATGCTGGACAAGTCAATGAAGAGAGTCTTAACAGAATTCTTAAAGACAGACGGAAAAATGTCATCGGCTGGTACAGGTTCAGGAGGAACACGCAGCAGCAGATGTCGTTCAGGGAACAGATCATCCATAAGCAGCTGACCCAGCTGCTAGGAGTGCCTGACCTAGTCTTCCTCCTCTTTAGCTTCATCTCCACAGCCAACAACTCCACACACGCCCTGGAGTATGTGCTGTTCAGACCCAACCGCAGGTACAACCAGAGGGTGACCCTCAGCATCCCAAACCTGGGCAACACCAGCCAGCAGGAATACAAGGTCTCCTCTGTCCCCAACACCTCACTCAACTACGCCAAGGTCATCAAAGAGCATGGGGCTGAATTTTTTGACAAAGATGGTGTGATGAAGGATATCAGAACAATTTTTCAAGTCTACGGTGCACTACAAGATAAAGTGCAATCTGTATGTGGAGAGGTTGAGCAGAGTGAACGTGTGAAAGAGAAAGTCCAGGAGGAGGTGAACAAACTCAAACAGCAAATTGTTCTCAGGAAACGAAAAACCACAGATGAAGAGAGAAGACTCCAGGAAGCGCAGAACCCTGAGCCACGTCTCACTCCTGAGGAGAACACAGAGCCCCCGGAGACCTCCCTCCTGTCCAGAGTGGCCTTCCACACCCCATCCACCCCCGAGCGGCCAGGTCCCTCCGCAAACCCTCCTGCCTACGCAGACCTCCTCTCCTTGCAGAATGACTCACTTCTCCCCTTCTCATCCTCCCCTACCAGTGCTGCGCTGCTCCCCCGGCCCCAGGCTGTGGGCTCCCCAGGCCACCCTTCTCCCAGCCCATTAGGTCTGGGTCTCAGTGCTGGCCCCAACCCTGCTCCTAGCCCTGGTACACCATACCTGGGAAACGGGGACGGATCCAGCTCTGACTCCCTGGACAGACAGGCCGCAGGGcaagaggatgatgaggaggatgatgatgatgacagcaGCGAGTACGAGAACCTTGTGAGCGAGGTGGGGCAGTTGCCCCCAGTTTCTGCCAGTGTGTTGCTGCAGGGCCGCCCAGCCGCCCTCAGTCCGGACGGCGACGCCTCAGTCCGTGGTTCACAGACCTAGTAGATGGGGATGTGGGGGGGCTCAATTAACTGACGCACCGAGATAGGAGGGCGTCCAAACCAATCAAAGATAATTATTCTATATTAGAGGAAGTGCCAGCCCTGAAAATAAAAGGCATGCGCAGGTGGGGTATTCTGCTGTGTATATCTGTTTGTCTTAGTTTTATCTCTTCTGGGGGGAGTATCAAGCTTCATGGGGTTTTACTTTTCTGTCTAGCATGGAAAAGCTAGTCCGTTGGAGCCTGGCTCTCTTCAGTGGATGTGTTTTGATTTAGGGACGGAGGACGTTATAATGGAATAAACGCCAACCGGTTTGTCCGACCTCTCCGTATGGATAGACCCACTCCGCTTTTCCTGGATCATGCTGCGTCACATCTGCATCACCAACTTTAAGCATCCAATTGTACCATTACCTCTTGCACTATTTTTGCTTTCTTTTAACAATTTAAGAAAAGCAAAAGGAAAATGTTCTGCGGCCTTCAAaaccttttctttttttttgtgagaCGGGTGAGattttttttcaatatttttgGGGTGGTGATTTGCTTATTACAAAAAAGAAGAGATGGTGGTGACTGCCAAAGTAATAGAAACACTTGAGAAAGTATATTCaaagcaggtgcttccaaacACAGGTGGGGAACCTGAGTGGCCTGCCAAGCATTATCATCCCATCATGCCTATGGGCATGTATAAAAATGCttggcaggccattattttggctactatGGCTATGCCACCAACCACAGGGCATGAGTTgttactgaatggtttgatgagcatgaaaacaatgtaaaccatattCAATGCTGTCTGTCACCAGACCTCATCCCAATTGAACGCTTATGGGAAattctggagcggtgcctgagacagcatttttCACCACCATCCATGTCGCATCCCTCccaagttccagacacttgtagaatctatgccaaggtgcattgaagctgttctggccccaacgccctattaagtcactttatgttggtgtttccttttatTGTCAGTTATGTATGTAAACTATCATTTCGGTAGCCTGCACGGTTCTAGACACTCAACTTTGAACTGTCATTAGGATTTAATTTCCTTTTAACATCAATGTATTTTTATGAATCATGCGGTTGCCTATTTAGATGACGAAGAATAGTTTTTATTCAAAGTTTTCCTTTGCCACTACTATAATGGGTGCTTATATTATTTTTATGACAACTTTAATGTTACTCTCTCATtcttctataataacactgaAACTGTATGCGCTTTGCTGCACTTAACAAATGTAGTTGATTTATTTTATTGTGCTTTACCAATGCAGTTCAGTTGTGCTACTTGAGTAGTATGCTTTGACCACCTGAGCAGAGCTAGCTCAGCTTTTGCGCATTGTATGGGGTCGACAGGGCGAAAACACAACTTACTGTAGCTTTACTAACCAGACAACTCTGCTGCATCAGAGCTAGCAGTAAACAAGAAACTGCTTCTACATAGACCTGTCTGCTTCTTCCACCTGTTGTCCTTGCACTGCTGG
>XR_002470336.2
caaccggatgcttcatatttatacatccggtgaaacatCTAGGAGGGGTGCTATCATTGAGTTATAGATGGGATGTTTCCATCATGGCGGCATCCATTTCGGGATATACTTTTAGTTCTGTGTGTTATCACAGCGCTAACAGCAACTCTGATCATGAGGGATTCCTTTTAGGAGAAGTTAGGCATGAAGAAACTGTCAGCATCAGTGATACACAGATCAGCAGTTCTGAACTACTCCAAGTAGTAGaagTCCACAATCATGAACCTTGTGCACAGCTATTTAGCTTTTATGATTATGCTGGACAAGTCAATGAAGAGAGTCTTAACAGAATTCTTAAAGACAGACGGAAAAATGTCATCGGCTGGTACAGGTTCAGGAGGAACACGCAGCAGCAGATGTCGTTCAGGGAACAGATCATCCATAAGCAGCTGACCCAGCTGCTAGGAGTGCCTGACCTAGTCTTCCTCCTCTTTAGCTTCATCTCCACAGCCAACAACTCCACACACGCCCTGGAGTATGTGCTGTTCAGACCCAACCGCAGCAGGTACAACCAGAGGGTGACCCTCAGCATCCCAAACCTGGGCAACACCAGCCAGCAGGAATACAAGGTCTCCTCTGTCCCCAACACCTCACTCAACTACGCCAAGGTCATCAAAGAGCATGGGGCTGAATTTTTTGACAAAGATGGTGTGATGAAGGATATCAGAACAATTTTTCAAGTCTACGGTGCACTACAAGATAAAGTGCAATCTGTATGTGGAGAGGTTGAGCAGAGTGAACGTGTGAAAGAGAAAGTCCAGGAGGAGGTGAACAAACTCAAACAGCAAATTGTTCTCAGGAAACGAAAAACCACAGATGAAGAGAGAAGACTCCAGGAAGCGCAGAACCCTGAGCCACGTCTCACTCCTGAGGAGAACACAGAGCCCCCGGAGACCTCCCTCCTGTCCAGAGTGGCCTTCCACACCCCATCCACCCCCGAGCGGCCAGGTCCCTCCGCAAACCCTCCTGCCTACGCAGACCTCCTCTCCTTGCAGAATGACTCACTTCTCCCCTTCTCATCCTCCCCTACCAGTGCTGCGCTGCTCCCCCGGCCCCAGGCTGTGGGCTCCCCAGGCCACCCTTCTCCCAGCCCATTAGGTCTGGGTCTCAGTGCTGGCCCCAACCCTGCTCCTAGCCCTGGTACACCATACCTGGGAAACGGGGACGGATCCAGCTCTGACTCCCTGGACAGACAGGCCGCAGGGcaagaggatgatgaggaggatgatgatgatgacagcaGCGAGTACGAGAACCTTGTGAGCGAGGTGGGGCAGTTGCCCCCAGTTTCTGCCAGTGTGTTGCTGCAGGGCCGCCCAGCCGCCCTCAGTCCGGACGGCGACGCCTCAGTCCGTGGTTCACAGACCTAGTAGATGGGGATGTGGGGGGGCTCAATTAACTGACGCACCGAGATAGGAGGGCGTCCAAACCAATCAAAGATAATTATTCTATATTAGAGGAAGTGCCAGCCCTGAAAATAAAAGGCATGCGCAGGTGGGGTATTCTGCTGTGTATATCTGTTTGTCTTAGTTTTATCTCTTCTGGGGGGAGTATCAAGCTTCATGGGGTTTTACTTTTCTGTCTAGCATGGAAAAGCTAGTCCGTTGGAGCCTGGCTCTCTTCAGTGGATGTGTTTTGATTTAGGGACGGAGGACGTTATAATGGAATAAACGCCAACCGGTTTGTCCGACCTCTCCGTATGGATAGACCCACTCCGCTTTTCCTGGATCATGCTGCGTCACATCTGCATCACCAACTTTAAGCATCCAATTGTACCATTACCTCTTGCACTATTTTTGCTTTCTTTTAACAATTTAAGAAAAGCAAAAGGAAAATGTTCTGCGGCCTTCAAaaccttttctttttttttgtgagaCGGGTGAGattttttttcaatatttttgGGGTGGTGATTTGCTTATTACAAAAAAGAAGAGATGGTGGTGACTGCCAAAGTAATAGAAACACTTGAGAAAGTATATTCaaagcaggtgcttccaaacACAGgccattattttggctactatGGCTATGCCACCAACCACAGGGCATGAGTTgttactgaatggtttgatgagcatgaaaacaatgtaaaccatattCAATGCTGTCTGTCACCAGACCTCATCCCAATTGAACGCTTATGGGAAattctggagcggtgcctgagacagcatttttCACCACCATCCATGTCGCATCCCTCccaagttccagacacttgtagaatctatgccaaggtgcattgaagctgttctggccccaacgccctattaagtcactttatgttggtgtttccttttatTGTCAGTTATGTATGTAAACTATCATTTCGGTAGCCTGCACGGTTCTAGACACTCAACTTTGAACTGTCATTAGGATTTAATTTCCTTTTAACATCAATGTATTTTTATGAATCATGCGGTTGCCTATTTAGATGACGAAGAATAGTTTTTATTCAAAGTTTTCCTTTGCCACTACTATAATGGGTGCTTATATTATTTTTATGACAACTTTAATGTTACTCTCTCATtcttctataataacactgaAACTGTATGCGCTTTGCTGCACTTAACAAATGTAGTTGATTTATTTTATTGTGCTTTACCAATGCAGTTCAGTTGTGCTACTTGAGTAGTATGCTTTGACCACCTGAGCAGAGCTAGCTCAGCTTTTGCGCATTGTATGGGGTCGACAGGGCGAAAACACAACTTACTGTAGCTTTACTAACCAGACAACTCTGCTGCATCAGAGCTAGCAGTAAACAAGAAACTGCTTCTACATAGACCTGTCTGCTTCTTCCACCTGTTGTCCTTGCACTGCTGG

Function

symbol description
fam175b BRISC complex subunit Abro1

NR:

description
BRISC complex subunit Abro1 isoform X1

GO: NA

KEGG:

id description
K20799 FAM175B, ABRO1; BRISC complex subunit Abro1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021580552.2 False 2942 mRNA 0.47 9 25939726 25947986
XM_021580553.2 False 2939 mRNA 0.47 9 25939726 25947986
XR_002470336.2 True 2868 mRNA 0.47 10 25939726 25947986

Neighbor

gene id symbol gene type direction distance location
LOC110502495 zranb1 coding downstream 7252 25884956 ~ 25932474 (-)
LOC110503094 edrf1 coding downstream 204630 25728488 ~ 25735408 (-)
LOC110503093 NA coding downstream 235306 25703256 ~ 25704420 (-)
LOC110503059 NA coding downstream 521127 25417364 ~ 25418599 (-)
LOC110502487 LOC106607391 coding downstream 747401 25131256 ~ 25192325 (-)
LOC110502501 gpr26 coding upstream 278644 26226630 ~ 26230546 (-)
LOC110502502 hmx2 coding upstream 446247 26387522 ~ 26398133 (-)
LOC110502503 hmx3 coding upstream 455627 26403613 ~ 26406554 (-)
cuzd1.2 LOC106607512 coding upstream 509024 26457010 ~ 26465890 (-)
LOC110502513 LOC106607606 coding upstream 1326566 27252967 ~ 27310171 (-)
G1847511 NA non-coding downstream 34344 25899996 ~ 25905382 (-)
G1847409 NA non-coding downstream 121051 25764988 ~ 25818675 (-)
G1846928 NA non-coding downstream 416361 25523085 ~ 25523365 (-)
G1846927 NA non-coding downstream 416810 25522270 ~ 25522916 (-)
G1847576 NA non-coding upstream 66837 26014823 ~ 26015088 (-)
G1847579 NA non-coding upstream 67925 26015911 ~ 26016597 (-)
G1847580 NA non-coding upstream 69474 26017460 ~ 26017691 (-)
G1847581 NA non-coding upstream 70013 26017999 ~ 26018296 (-)
G1847862 NA non-coding upstream 272218 26220204 ~ 26223088 (-)
G1846858 NA other downstream 499339 25439807 ~ 25440387 (-)
LOC110502462 LOC106607169 other downstream 2593955 23344353 ~ 23358461 (-)
G1843946 NA other downstream 2706303 23182987 ~ 23233423 (-)
LOC110502461 LOC106607165 other downstream 2721456 23213905 ~ 23218749 (-)
G1841959 NA other downstream 4567927 21345514 ~ 21371799 (-)
G1850441 NA other upstream 2126939 28074925 ~ 28078251 (-)
LOC110502553 NA other upstream 2976753 28919846 ~ 28932600 (-)
LOC110502574 LOC106608078 other upstream 5203623 31151609 ~ 31239202 (-)
G1854905 NA other upstream 5269611 31217597 ~ 31218171 (-)
G1855326 NA other upstream 6032011 31979997 ~ 31981333 (-)

Expression


Co-expression Network