cuzd1.2 (LOC106607512)


Basic Information

Item Value
gene id cuzd1.2
gene name LOC106607512
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 26457010 ~ 26465890 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021580562.2
GCCTTTAGGTATATAAACTGTCCTGTTTTGGGACTGTGTCATCGTCAAGGGGAAGGTGAAACATGGAGATTGCTACCACTCTTCTTGTTCTTTGCTCTGTGATAGTCTCACATGGAGCTCAAGGTCAGTGGGAGACATGGACCACAGCAGAACCTTGGAGAACAGTTGACCCATCAGGCACCAGTGCCCCATGTGGTGGCTACCTGACTGCATCAAAGGGCCAATTCAACAGCCCCAACTACCCCAGCAACTACCCCAACAATGCCTACTGTACATGGAACATTCAGACCCCACCGGGCAGCCAAATCGTTCAGCTGGAATTCCCCTATGTCAATCTTGAGggtgacttcaactgtaggtatgaTTCCATCTCCGTGTACGATGGCTATTCCACCTACAACCGACTCCTGGGAAAGCTGTGTGGAGGACAAAGCTCAACCTTTTACTCCACCGGAAGTTCAATTACTGTGCAATTCACAAGTGACAGCTCCTCAACGTACAAGGGGTTTCAAGCAGAGTATCGTGTCGTAGATGGAGGTTCTTGTAGACACAACTGTGGCTATCAGGTTGGCAACTGCTCCTGCTCATATTCCTGTGAATACAGGGGCAACTGTTGCCAGGACTATCAACAGATCTGCTATGACACAACCACAGAACCCAGCACCACAGATGCAGGACCAACAACCGGAGATTATTATTCCTGTGAGTACAACTGTGGCTACAGTGGCATGGTCTGCTCCTGCACCTCATCATGTCAAAACCATGGCAACTGTTGTCATGACTATCATGATTATTGCCCGGGTACAACAGAAACACCTACAGCTCAGCCTTCCTGTAGGTACAACTGTGGTTATAATCTTGGAAGCTGTTCCTGCTCCAGCTCCTGTCAATACTACGGCAACTGTTGCTATGACTACAATGAGATATGCTATGGCACAACCACAGACTCCATCACCACAGCTGCAGATCCAGCTACTGCAACAACCGGAGCCACAGGTTGGGGTTCCTGTAGATACAGCTGTGGTTCTTATGCCGGTGGTTGCTCCTGCACCTCATCCTGTCGATACTATGGCAATTGCTGTCATGACTACAATGATTATTGCCAGAGCACAACGTACGAAACTGGTACAACCTCAGAGGCTTCCTGTAGGTACAACTGTGGTTTCAATCTTGGAAGGTGTTCCTGCTCCAGCTCCTGTCAATACTATGGCAACTGTTGCTATGACTACAACACGTActgccccaccaccccaccaGAATCAACAGTCTCAGGGACTCACCCCACCTGTGGAGGAAACCTGCATGGCTCTGGGTCCATCTCAAGTCCATACTATCCAGAATATTACCATGACAACGCCTACTGTGTCTGGCATCTATCGGCCCCCTCTGGCCAAAGGATCTTTATGTCATTTACTGACCTGGAGTTGGAGAACTGCTGCTCTTGTGATTACATCTCTGTGTACGATGGATCGTCTGTGCAATCTCAAATGCTAGGCACAATCTGTGACTTCAACAACGACACCTCTTTGGCTGCCTACCACTCCACCTCTAACTACATGACAGTTCTCTTTCGCTCTGACCAATCAGTGGTCAGCAGGGGCTTCAGGGCCATGTTCAGCAGCTCCCTCGCATCAAACCAAGGTCGAGTGGACTGCTCCTCAGACAACATGAACATAGTGATCCAGAGATCCTACCTGCTCTCAATGGGCTACGATGGTAACAATCTGTACCTGAACGACCAGCATTGTAGACCTCAGGTCAACAGCTACCAGGTGGTGTTCAGCTTCCCAATCAATACCTGTGGGACCCAGCGAAAGTTTGAGAAAGGGAGAGTGGAGTACATCAACGCCGTCCGTGCCTACCGGTCCGACTCAGGCGAGATTACGCGGCAGTCTCATTTTCTGCTGCACGTGGAGTGTCGCATGGAGCAGGACACCATGGTCCAGGTTATGTACAAGACCAACGATGAGGGTAACGGTACCATAACAGGCACAGGCAGATTCAACAGCACCATGGCCTTCTTTACAAACAGCAACTTCTACAGTGAGATAACCCAGACTCCATACAAGATTACCCTCAACCAGAACATGTACGTCCAAGTCCGCCTGAGGAGGTCAGACAGCAGTCTACATCTGTTCCTGGACACCTGTGTGGCCTCTCCCTCACCTCATGACTTTCAAACCAGATCATATGACCTGGTGCGCAACGGATGTAGGAGGGACCCCACCTACTACTCCTACACCTCTGGTACCAGTAGCTACGCCCGCTTCACCTTCCAGGCTTTCAAGTTCCTGCGAGCTGATGAGTCAGTGTACCTGCAGTGTAAAGTCACCATCTGCCAAGCTTCTGACTACAACTCCCGCTGCCGCCGAGGCTGCCGCACCCGCAAGGCCAGGGACCTGGGATCCTCCCAGGGGAGCCACACCCTGATCCTGGGCCCCATCCAGCTCAAAGATCTGGAGAAGCCAGATGAGAAAGTGGCTGAGAAGGAGGAGATCCAGGCTAAGGTGGAACCTTAAGACTAAGCTGACCAGCCTCAACTAACTACTCTAATCATTAATACTATAATTCTGATTAATTTCACCTGAGGCAATGAAGTAGCCAATATTCCCTGCTAATGTACACTATAATCTTGTATCGCTTTCCTACTTTGGCTAAATGATTAAAAGCATTCAACAGACAA
>XM_021580563.2
GCCTTTAGGTATATAAACTGTCCTGTTTTGGGACTGTGTCATCGTCAAGGGGAAGGTGAAACATGGAGATTGCTACCACTCTTCTTGTTCTTTGCTCTGTGATAGTCTCACATGGAGCTCAAGGTCAGTGGGAGACATGGACCACAGCAGAACCTTGGAGAACAGTTGACCCATCAGGCACCAGTGCCCCATGTGGTGGCTACCTGACTGCATCAAAGGGCCAATTCAACAGCCCCAACTACCCCAGCAACTACCCCAACAATGCCTACTGTACATGGAACATTCAGACCCCACCGGGCAGCCAAATCGTTCAGCTGGAATTCCCCTATGTCAATCTTGAGggtgacttcaactgtaggtatgaTTCCATCTCCGTGTACGATGGCTATTCCACCTACAACCGACTCCTGGGAAAGCTGTGTGGAGGACAAAGCTCAACCTTTTACTCCACCGGAAGTTCAATTACTGTGCAATTCACAAGTGACAGCTCCTCAACGTACAAGGGGTTTCAAGCAGAGTATCGTGTCGTAGATGGAGGTTCTTGTAGACACAACTGTGGCTATCAGGTTGGCAACTGCTCCTGCTCATATTCCTGTGAATACAGGGGCAACTGTTGCCAGGACTATCAACAGATCTGCTATGACACAACCACAGAACCCAGCACCACAGATGCAGGACCAACAACCGGAGATTATTATTCCTGTGAGTACAACTGTGGCTACAGTGGCATGGTCTGCTCCTGCACCTCATCATGTCAAAACCATGGCAACTGTTGTCATGACTATCATGATTATTGCCCGGGTACAACAGAAACACCTACAGCTCAGCCTTCCTGTAGGTACAACTGTGGTTATAATCTTGGAAGCTGTTCCTGCTCCAGCTCCTGTCAATACTACGGCAACTGTTGCTATGACTACAATGAGATATGCTATGGCACAACCACAGACTCCATCACCACAGCTGCAGATCCAGCTACTGCAACAACCGGAGGTTGGGGTTCCTGTAGATACAGCTGTGGTTCTTATGCCGGTGGTTGCTCCTGCACCTCATCCTGTCGATACTATGGCAATTGCTGTCATGACTACAATGATTATTGCCAGAGCACAACGTACGAAACTGGTACAACCTCAGAGGCTTCCTGTAGGTACAACTGTGGTTTCAATCTTGGAAGGTGTTCCTGCTCCAGCTCCTGTCAATACTATGGCAACTGTTGCTATGACTACAACACGTActgccccaccaccccaccaGAATCAACAGTCTCAGGGACTCACCCCACCTGTGGAGGAAACCTGCATGGCTCTGGGTCCATCTCAAGTCCATACTATCCAGAATATTACCATGACAACGCCTACTGTGTCTGGCATCTATCGGCCCCCTCTGGCCAAAGGATCTTTATGTCATTTACTGACCTGGAGTTGGAGAACTGCTGCTCTTGTGATTACATCTCTGTGTACGATGGATCGTCTGTGCAATCTCAAATGCTAGGCACAATCTGTGACTTCAACAACGACACCTCTTTGGCTGCCTACCACTCCACCTCTAACTACATGACAGTTCTCTTTCGCTCTGACCAATCAGTGGTCAGCAGGGGCTTCAGGGCCATGTTCAGCAGCTCCCTCGCATCAAACCAAGGTCGAGTGGACTGCTCCTCAGACAACATGAACATAGTGATCCAGAGATCCTACCTGCTCTCAATGGGCTACGATGGTAACAATCTGTACCTGAACGACCAGCATTGTAGACCTCAGGTCAACAGCTACCAGGTGGTGTTCAGCTTCCCAATCAATACCTGTGGGACCCAGCGAAAGTTTGAGAAAGGGAGAGTGGAGTACATCAACGCCGTCCGTGCCTACCGGTCCGACTCAGGCGAGATTACGCGGCAGTCTCATTTTCTGCTGCACGTGGAGTGTCGCATGGAGCAGGACACCATGGTCCAGGTTATGTACAAGACCAACGATGAGGGTAACGGTACCATAACAGGCACAGGCAGATTCAACAGCACCATGGCCTTCTTTACAAACAGCAACTTCTACAGTGAGATAACCCAGACTCCATACAAGATTACCCTCAACCAGAACATGTACGTCCAAGTCCGCCTGAGGAGGTCAGACAGCAGTCTACATCTGTTCCTGGACACCTGTGTGGCCTCTCCCTCACCTCATGACTTTCAAACCAGATCATATGACCTGGTGCGCAACGGATGTAGGAGGGACCCCACCTACTACTCCTACACCTCTGGTACCAGTAGCTACGCCCGCTTCACCTTCCAGGCTTTCAAGTTCCTGCGAGCTGATGAGTCAGTGTACCTGCAGTGTAAAGTCACCATCTGCCAAGCTTCTGACTACAACTCCCGCTGCCGCCGAGGCTGCCGCACCCGCAAGGCCAGGGACCTGGGATCCTCCCAGGGGAGCCACACCCTGATCCTGGGCCCCATCCAGCTCAAAGATCTGGAGAAGCCAGATGAGAAAGTGGCTGAGAAGGAGGAGATCCAGGCTAAGGTGGAACCTTAAGACTAAGCTGACCAGCCTCAACTAACTACTCTAATCATTAATACTATAATTCTGATTAATTTCACCTGAGGCAATGAAGTAGCCAATATTCCCTGCTAATGTACACTATAATCTTGTATCGCTTTCCTACTTTGGCTAAATGATTAAAAGCATTCAACAGACAA

Function

NR:

description
deleted in malignant brain tumors 1 protein-like isoform X2

GO: NA

KEGG:

id description
K24793 CUZD1; CUB and zona pellucida-like domain-containing protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021580562.2 False 2683 mRNA 0.50 22 26457010 26465890
XM_021580563.2 True 2677 mRNA 0.50 21 26457010 26465890

Neighbor

gene id symbol gene type direction distance location
LOC110502503 hmx3 coding downstream 50456 26403613 ~ 26406554 (-)
LOC110502502 hmx2 coding downstream 58877 26387522 ~ 26398133 (-)
LOC110502501 gpr26 coding downstream 226464 26226630 ~ 26230546 (-)
LOC110502496 fam175b coding downstream 509024 25939726 ~ 25947986 (-)
LOC110502495 zranb1 coding downstream 524536 25884956 ~ 25932474 (-)
LOC110502513 LOC106607606 coding upstream 808662 27252967 ~ 27310171 (-)
LOC110502517 LOC106607615 coding upstream 958002 27423892 ~ 27435842 (-)
si:ch211-248a14.8 LOC106608780 coding upstream 983732 27449622 ~ 27453880 (-)
LOC110502526 LOC106607693 coding upstream 1384214 27850104 ~ 27859306 (-)
LOC110502525 LOC106607696 coding upstream 1394202 27860092 ~ 27983425 (-)
G1848195 NA non-coding downstream 9169 26446243 ~ 26447841 (-)
G1848183 NA non-coding downstream 29503 26427254 ~ 26427507 (-)
G1848177 NA non-coding downstream 38848 26417901 ~ 26418162 (-)
G1848039 NA non-coding downstream 86828 26369904 ~ 26370182 (-)
G1848203 NA non-coding upstream 2075 26467965 ~ 26468202 (-)
G1848261 NA non-coding upstream 78918 26544808 ~ 26546370 (-)
G1848675 NA non-coding upstream 111394 26577284 ~ 26587239 (-)
G1848704 NA non-coding upstream 145326 26611216 ~ 26624631 (-)
G1846858 NA other downstream 1016623 25439807 ~ 25440387 (-)
LOC110502462 LOC106607169 other downstream 3111239 23344353 ~ 23358461 (-)
G1843946 NA other downstream 3223587 23182987 ~ 23233423 (-)
LOC110502461 LOC106607165 other downstream 3238740 23213905 ~ 23218749 (-)
G1841959 NA other downstream 5085211 21345514 ~ 21371799 (-)
G1850441 NA other upstream 1609035 28074925 ~ 28078251 (-)
LOC110502553 NA other upstream 2458849 28919846 ~ 28932600 (-)
LOC110502574 LOC106608078 other upstream 4685719 31151609 ~ 31239202 (-)
G1854905 NA other upstream 4751707 31217597 ~ 31218171 (-)
G1855326 NA other upstream 5514107 31979997 ~ 31981333 (-)

Expression


Co-expression Network