LOC110502510 (LOC106607591)


Basic Information

Item Value
gene id LOC110502510
gene name LOC106607591
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 26565286 ~ 26603085 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021580578.2
GGGTATTTCTTTATTCAAGCAAAGTAtaagggagttgtactccagtctaaTAGGTGGctgtaatgcaacatttattggatgccaactgcagttaaacctcatcgaagaagAAAGCGTCTAGTCTGCTGGAGAACCACACGAAGAAGAATCAGAAGAATGGGAGTCATTGGCACTACAAAATAAATAAAGTCCAGAATCCGGAAAGAATTTAAAACAATGCCGGTCATCTAAGTACCGCTATAAGCGCAGTTTTTCCCATTGGTAAATTCTGTATCGTGTTTGTAAACTGTGGCTATCTTTGCACGGAGTTAACGCTTGTTTTGTGTGATTACGCCGAAGTCTAAGAAGAGGCCTAGCCGGGTGCAGAAGAAGCGGTCCCACTGTCTGAAGAATATGTAACATACATCAATCACCATGACATCCAGATTTGGTAAAACCTACAGCCGTAAGGGAGGGGAGGCAAACTCCAAATTTGAAGAGGTCTTCTCCAACAAGGCCACACTTAGCACCAAATGGGGAGAGACCACTTACAAGGCCCAACTGGGCTCTAAGCGGCCCACTCTGAAGCCTGAAGTAGTCGAGTTACTCAAGAGGCCCCGGATTGAGGATGATGACAGCTCAGAAGATCCTTTTGGTTTTGACAGCGATGATGAGTCCAAGCCTGTCACCTCCTTCGGTCTGCCCCAGTCTAAACCGGCTGAGGGGGAGGCCAGTAAACTGCCTTCTGCTACAGCCACAGTACCAGTGGATACCAGTAGGAACTCCAACAGCACATCTACAGGCAAGCAAACATTgtccaatgagggtgcagaaaaGAGTAGACAGTCCTTGTTCAGAAATAAATCAGAGAGTAACCAGAAGCCTATTGCTCAGTCCTCTGTTTCAAAGACTGTGCCCAAGGACCCCTATGTGGAATGGAGCCTAATAGGAACCCAGGAGTTTTCTACCTCCTCCCCTAGCATGGATCATCTCCAGGAAAAAGACTCAGCTGAGGCACCAGGGTTTAGTGGGGACTCCCAGTCCTCATCTTCCAAGGATGGGCTCTCCTCAGGTGGGATGAAAAGTGCTGAACACGAGTCTCCGGCCGAGCCGGTTGTTGacaacatccctccctccccgttcCTCCTCAGGCCGTCCAATACTAGGAAATACATCCGGCCCAAGCCAAACAAGTTCTCCGATGTTCTAGATGCTTCTGCTACTAGCGACAGCAAACTGCCCTTAGCCACCAGCAGTCCGGCTGCACTGATTCCCAAAAGTGTGTCCACTGCCAGGGGTTGCACTAATGCTATCACAACAGTGGCCAAACCGGCGACTAAACCTGCTGGCAGGGGTCGGGTACGGGACTATACGGTGCTGCACCCATCCTGCCTGTCGGTGTGTAACGTCACCATCCAGGACTCCATAGAGCGCAGCATGGACGAGCTCATCACCAGCGCACCCCCTGCTGACCTGGGGGAGGCGGGACGGCTGAGGAAGAAGGCAGACATACCTCCAGCCAAACCCACCAGGTCCCGAACCACCCAGAGTAAGACCAAGAAGGAGACCAAGCTGGAGTTCTTTGGCTTCGAGGATAAAGGTGaccaggagggggaggagggagtggaCCACGCGGCTGGTGGAAGCAGCAGCTACAAGATCAAGTACTTTGGCTTTGACGACCTCAGCGAGAGCgacagtgatgaagaggagggCTCCCAGGCcaaagagaagaggaaggccaAGAAGGCTGCAGCAGCTCCAATGGCAGCTATTGTGGACAGCCCCCAGCCCAGCGACTCTCAGGACAGCCAGGGCAGCAGCAGTACAGATATTCTGGAGTTTTCTGATGACTCGATCCCTGGTGGGTCTGAAGGGCAGAAGGGTCGCTCAGGAAAACAGGGGGACAAATCCATGGAGGCTGGCAGGAAGATCTTCAGTGGGCCCAAAAAGTCCCCTGCTAAAGCTGTGTACAATGCCCGCCACTGGAACCAGCCCGAGCCTGAAGAGATGCCCATGCCACCCCTGGCCCGCGCGCACACTGCTCCGGCCAGCGTATTGAGCGGAAGCAGCAAGGACACCAACTCCCACAAGGATGACGGTCTGTTCAAAGCTCCTCCCCCACCGCCCAAAGTCATCAAGTCTGTGACCATCCCCACTCAGCCTTACCAGGACATCGTCACGGCCCTCAAATGCAGAAAAGAACACAAGGAGCTGTACACGGTTGTGCATAATGTGAAGCACTTCAACGATGTGGTAGAGTTTGGTGAGAACCAGGAGTTTACTGACGACTTTGAGTACCTGGAGACTGGCCTGAAGAGCAGCCAGCCACTCAACACACGGTGCCTTAGTATAATCAGTCTAGCTGCAAGGTGTGCAATGCCCAGTTTCCGGATGCACCTACGGGCCAGAGGGAAGGTGGCTCAGGTCTTCAAGATGTTGAATGATGCCCCGCAGCATCCGAACCTTGCCCTGTGTACGGCCTCTCTAATGTACATCCTAAGCAGAGACCGGTTGAACATGGACCTGGACCGGGCCAGTCTGGAGTTGATGATCAGACTGTTGGAGCTGGAGCATGATCACACGGGCCACCACCAGGACCAACTGACTGCCAAGGAGATAACCAAGGTCAAGGAGAAGATTCGCAAGTTGTGTGAGACGGTCCACAACAAGCACCTGGACCTGGAGAACATCACGTCGTGTCACTTGGCCATGGAGACCCTGTTGTCGCTGACCTCAAAGAGAGCCGGCGACTGGTTCAAAGAGGAGCTGCGCTTACTGGGAGGCTTGGACCACATTGTAGACAaagTAAAAGAATGTGTCCAGAACCTGAGCCAAGAGGATGACAAGGAGAAGCTGGTGTCGTCGCTATGGGGGGCAGAGAGGTGTCTAAGAGTACTAGAGAGTGTGACTGTCCAGAACCCAGAGAACCAGGGCTACCTGATCGCCTACAAGGACTCTCAGCTCATAATGTCCTCTGCCAGaggTTTGCGGTACTGTGTGGACATGATCCAGCGCTACAGCCGGGAGGTGAACAGCTCTTTGTGTTCGTCAGGCACGGCGCTGCCCCACTCCAGCTTTAGCAACGTGGGCAAGGCCGTGGAGGACTGCATGAGGGCTGTCATAGGGGTTCAGCTCAACCTCACCCACGACAATGAGTGGGGAAGCACTAAGACTGGAGAGCAGGACCAGCTCATCATCACAGCACTCAACTGCGTCCTACGGGTCCCACGCTACATACCTCAGGAACAACGCTTTGACATCCGAGTCctggGCTTGGGGCTGCTGATTAACCTGGTGGAGTACAGTGCAAAGAACCGCCACAGTCTGGTGGACATGGAGTTCAACACAACCAGCCCTGAATGCAGCcagggagaggcaggaggagatgAGACCCAGACCCCTGAACCAGTCCCAGCCTCTACAGAGATCGAGAACGGGGCAGAGCCACCTACAGCAGCCCCTTCAGAGGGTGCTGAGGAGAAGACCAAGGACTCTTCCTCGGGTGCCCTGGCTGCTCTGGTGCAGTTCTTCCTGGAGCGGGAGCGAGCGGCCATATTGGCCGAGGCGCAGACTGATGACCTCATCAGTGAGGCGCCAAAACCCCAGGACCAGAGCGGGGAGTGGCAGGAGACGTCAGGCGAGATCCAGTGGGTCGCCACGGAAACGAACGACAGTGAAAATGACAAGGAGAAGGACAcaaagaaagaggaggaagaggaagagctgGACCTCAACAAAGCTCTACAGCATGCTGGGAAGCACATGGAGGACAGCATCGTGGCCTCCTACACAGCTCTGCTCCTGGGCTGTCTGTGTCAGGGCAGTCAGGTTAATGTGATTAATGTGCGGGGAAACCTACCCAAGGGAGATTTCTCCATCATGACGGAAATGCTGAAGAAGTTCTTGAATTTCATGAACCTCACTTGTGCATTTGGAACCACAGGGCATAAATCCATCTCTCGTGTCATAGACTACCTGGAGCACTGTTAGCAAATCCTTCTTTGCACTCTGACTGCACATAACGGTCCTGCTAGATCTGGCAACCCCAGCAGGAGGGGCTGTACAGAGAATCCACCAGAGGTCAACAGTGTTCCCCGGCAACGCTTCAACCTGCGTCCTCATTCTGAAGAGCAAGACACACAAACTCAGCACTTTCTGAACCAAAGCCACGTAAACATGTACCATTGATTTGAATCAATGCTGTTTTAAATCTTCACACCATCCAACTACTGGTAAGATTCCTAGTTGCAGAGGACAGCTTGAGACTGCTGGCATGTGGAGTgagtttttgtattttttatatatatatatatatatatattgaatcaAGGATGTAATCATTGATTAGCTTGAAAATAGCACTCATGGACACGTGTCAACAATGTCTGTTAAGTTGTGTGGAATGGTTGAATGCAAAAGATCAGTGTAGCCATTTACATGTTTGCCCCTGACGGTTGTAGAAAAGGGAAGGTCATTGTGGAAGACCCCTGTAGTTCTCTCTAAGCTAAGCTTCAGCTCTGAATATGTCCAGTATCTGTATAAGCTTACTGTCATGTCGAAATTCACCTctgttgaaatatgtttttcttcAGTGCATCATGCTTGTTTAAGTTTTTAGAATGGCATGTCATTTAACAATCTAAATAGATTTAAAAGAGCTCAGCAGCTCTGGATGACTGTTAATGTTATTTAAATCTTTGTTTTTAAATAATGGCACTTGGCATTGTTTTCCTTCCTGCCTTTCCCAATTTGACTTTACAGTAAAGAAATtgagttttgtttgtttttaaaataGCAGTTCAGATGATTTTAATGATTGTGGttttcatgtatttattttaccaTTAATGATCCAGATCTGATGCTGCTTAAGATGTTTCAAGTCTCTTTACCTTTTACATGTTCCACCGAACATGTCACTTGAAGTGGCTGGGTATAATAACTGCTGTATATACGGTTTTATTAGACTCGGAGAGTCCTTGGTAAACCGGCCTGACATTAATAATAACCAAACCTCAGCAAACTGGCATAATCCTCACTGAAAAGGATTGTTCTTTGCCTATTATATTGTAACATTTGTTCTGTGGGCATTGTATCTAACCACTTCAAGTAGTGCCTATCCGGAACGAACACCTAGCCCAGGGTTCAcctctggtcctggagagctgCAGGGTCCATCCAGTCCTGCAATAACACACctgattaatatatatataataaagatCAAATCTAATCAATTGTTACTGCAAGGCTGGATTGCAAGCCTAtatacacaagcatttcgctacactcgcattaacatctgctaaccatgtgtatgtgacaaataaaattggatttgatttgacctagTACCCTGTGTTGGTGACCCCTGTCCTAGCCCCAACCCCCTAGGTACTTGTGGAGGTCTGAGAGGACTGGATGGTAAAATTCTACCTAGCCTAACAGAGGGAAAAGTGAAGTTGCTACCATATCTTTTTATGCATATCCTTTCGGCTCTACACAAGTGGTGGCAGTGGTTGGCTTTGTGTCTTATGTCTAGTTGGACCTGACCTTCCTACTCTGAGCGGTGAATCCCCTTAACATCCTTCCAGCTATACTATAACTAGTCCTTGTCCTCCAAGAAGATAGTGTTTGACTGACAGCTATACTGATAGCCGTTTCATGTAATTTCCCTCTGATTTGTAGAGCTGCAGTTGAACAGACATGTTTCTTGCGAGTTGATTTGCAAATCTGGTCGTGGATGGAATTTCAGAATGTAAATAAAAACATCTGTAAATAGTGGTTAATGGATGTTAGAATGCTAGACTACTTTTCTGAAgctgatatttttattttatacaacatTTCTCAGTTGTCATTTGAagtaaaaacaaaaaatgtataaaaaaagacAACTGCAAGGCAAAAAATGTTTGTACTGGTTTTGAGGACATTCTTTGGCTACAGAATTGTAACTCAAATAAAAAGTTGCTACTTTCAGTATA

Function

NR:

description
wings apart-like protein homolog

GO: NA

KEGG:

id description
K25163 WAPL; wings apart-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021580578.2 True 5969 mRNA 0.49 20 26565286 26603085

Neighbor

gene id symbol gene type direction distance location
LOC110502507 LOC106607527 coding upstream 19853 26515116 ~ 26545433 (+)
LOC110502508 LOC106607536 coding upstream 35924 26471360 ~ 26529362 (+)
LOC118943853 NA coding upstream 95672 26464542 ~ 26469614 (+)
LOC110502505 LOC106607516 coding upstream 108401 26441097 ~ 26456885 (+)
LOC110502499 chst15 coding upstream 399539 26129692 ~ 26165747 (+)
LOC110502511 LOC106607602 coding downstream 92474 26695559 ~ 27146505 (+)
LOC110502514 LOC106608765 coding downstream 777174 27380259 ~ 27398338 (+)
LOC110502516 LOC106607607 coding downstream 797828 27400913 ~ 27414490 (+)
ecd ecd coding downstream 831727 27434812 ~ 27448641 (+)
LOC110503096 LOC106577060 coding downstream 870566 27473651 ~ 27485960 (+)
G1848088 NA non-coding upstream 138233 26426847 ~ 26427053 (+)
G1848074 NA non-coding upstream 163438 26401634 ~ 26401848 (+)
G1848062 NA non-coding upstream 179596 26385362 ~ 26385690 (+)
G1848045 NA non-coding upstream 191445 26373557 ~ 26373841 (+)
G1848354 NA non-coding downstream 100430 26703515 ~ 26707704 (+)
G1848401 NA non-coding downstream 163886 26766971 ~ 26819859 (+)
G1848400 NA non-coding downstream 172888 26775973 ~ 26907050 (+)
G1848408 NA non-coding downstream 180297 26783382 ~ 26783783 (+)
G1848531 NA non-coding downstream 366066 26969151 ~ 26971834 (+)
G1845108 NA other upstream 2211040 24326264 ~ 24354246 (+)
G1844044 LOC106607169 other upstream 3218797 23345044 ~ 23346489 (+)
G1840558 fbxo28 other upstream 5780083 20781865 ~ 20785203 (+)
LOC110502429 ttc27 other upstream 6048400 20358591 ~ 20516930 (+)
G1839872 NA other upstream 6500299 20062064 ~ 20064987 (+)
G1849208 LOC106607606 other downstream 671253 27274338 ~ 27276259 (+)
LOC110502527 LOC106607701 other downstream 1387189 27990245 ~ 27993189 (+)
LOC110502528 bic1a other downstream 1398790 28001291 ~ 28078254 (+)
LOC110502541 LOC106607837 other downstream 1894938 28497576 ~ 28571528 (+)
G1851386 NA other downstream 2440276 29043361 ~ 29075998 (+)

Expression


Co-expression Network