Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110502532 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 28115595 ~ 28120442 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002470344.2 | False | 321 | mRNA | 0.41 | 2 | 28115595 | 28115991 |
| TU2118082 | True | 408 | lncRNA | 0.44 | 3 | 28115600 | 28120442 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502525 | LOC106607696 | coding | downstream | 132170 | 27860092 ~ 27983425 (-) |
| LOC110502526 | LOC106607693 | coding | downstream | 256289 | 27850104 ~ 27859306 (-) |
| si:ch211-248a14.8 | LOC106608780 | coding | downstream | 661715 | 27449622 ~ 27453880 (-) |
| LOC110502517 | LOC106607615 | coding | downstream | 679753 | 27423892 ~ 27435842 (-) |
| LOC110502513 | LOC106607606 | coding | downstream | 805424 | 27252967 ~ 27310171 (-) |
| fam13c | LOC106607716 | coding | upstream | 23177 | 28139168 ~ 28148897 (-) |
| LOC110502533 | mot9 | coding | upstream | 65095 | 28181086 ~ 28197583 (-) |
| LOC110502534 | LOC100380754 | coding | upstream | 87953 | 28203944 ~ 28227097 (-) |
| LOC110502535 | NA | coding | upstream | 112547 | 28228538 ~ 28413165 (-) |
| LOC118943855 | NA | coding | upstream | 275649 | 28391640 ~ 28392295 (-) |
| G1850380 | LOC106607701 | non-coding | downstream | 122626 | 27990184 ~ 27992969 (-) |
| G1850249 | NA | non-coding | downstream | 341193 | 27774132 ~ 27774402 (-) |
| G1850248 | NA | non-coding | downstream | 343345 | 27771213 ~ 27772250 (-) |
| G1850246 | NA | non-coding | downstream | 346142 | 27768955 ~ 27769453 (-) |
| G1850245 | NA | non-coding | downstream | 346929 | 27767804 ~ 27768666 (-) |
| G1850489 | NA | non-coding | upstream | 20573 | 28136564 ~ 28137101 (-) |
| G1850494 | NA | non-coding | upstream | 33624 | 28149615 ~ 28149901 (-) |
| G1850718 | LOC106607826 | non-coding | upstream | 348597 | 28464588 ~ 28466261 (-) |
| G1850764 | NA | non-coding | upstream | 471479 | 28587470 ~ 28587763 (-) |
| G1850766 | NA | non-coding | upstream | 473447 | 28589438 ~ 28589658 (-) |
| G1850441 | NA | other | downstream | 37344 | 28074925 ~ 28078251 (-) |
| G1846858 | NA | other | downstream | 2675208 | 25439807 ~ 25440387 (-) |
| LOC110502462 | LOC106607169 | other | downstream | 4769824 | 23344353 ~ 23358461 (-) |
| G1843946 | NA | other | downstream | 4882172 | 23182987 ~ 23233423 (-) |
| LOC110502461 | LOC106607165 | other | downstream | 4897325 | 23213905 ~ 23218749 (-) |
| LOC110502553 | NA | other | upstream | 808748 | 28919846 ~ 28932600 (-) |
| LOC110502574 | LOC106608078 | other | upstream | 3035618 | 31151609 ~ 31239202 (-) |
| G1854905 | NA | other | upstream | 3101606 | 31217597 ~ 31218171 (-) |
| G1855326 | NA | other | upstream | 3864006 | 31979997 ~ 31981333 (-) |
| G1855821 | NA | other | upstream | 4399075 | 32515066 ~ 32515408 (-) |
