fam13c (LOC106607716)


Basic Information

Item Value
gene id fam13c
gene name LOC106607716
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 28139168 ~ 28148897 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021580607.2
CGGAGCAGCGGAAGCATCACGGGGAACGCAGACAGACCGGGAAAAACAGGGAAAACACAGATATGTGCAGACATACATGGATTCTACTGAATCACTAACAGTGATACTATGAGAATTACAGAACACAGGGATTTCACCCTTCTGAGGAAGCTGAGTacgctgtcacacacacagggatCTAACTAATGGGATCACATGTGGATCCAGGTCTGAGGAAACCTAGGGAGAGCAGAACCGAGACAAGACCCATTATGTGGCTGCTAACGTCATGTCTTACGCCACCCTTTTATAACTGAGGTGTGGGGCACACGGACACAACACAAGATCACTTTCCCTAAGGACAAGCCCTCTTAACTGCCATCATCAGGATTTTGCTACCCACCTTCTTCAACCTCTCCACCCCAGACAGGGGATCTGCACCCCTGTTTTACCTTCTCCAGACCCCTAATTCTGAAGGCATGTTCTGCTTCTGTTTCCAGAGCCCCTCCCTGAAGCAGCAAGCCCTGGAGGCTGAGCTGTGCACCTCACCCCCCGGAACCCCCCAGGAGGACCTGGAACTCCCCCCTTGTACAAATGACTACCAGAGCCTAACCCCATCTCTCCAATCCCTCCCAAAACAGGACCAGGACATCATCAGCACTTCACTGACAGAAGCCAGTCCGGTCCACAGGgcccccgtgtctctctctgagGGGAGTAGCAGTGAGTGTCTGCTGACCCCTGGTCCTAGTCCTCTCCTCCAGCGCCTCGCGGCTGGCGACTGTCCCATTCCGTCCCCCCGCTGCCACAACCTCAGCCAGGGCCAGCGCTTCAACACAGACCCGGAAACAGCCCCATCCCCACCCTGCTCACAATACATCAGGATgGCCCATTACACAGTCAGGACTGAACCAGCAGAGGGAGCTATCAAGACCCCATCAATCACAATGCTAAACAGACACATCCAGAACCTGAGGAAGAGGATCAGACATTTTGAGGAGCGCTTTGAACAAGAGAGACACTACAGGCCAGCATACAATGATAAGACTGCCCACCCAGAAATATCTAGACTGATGCGAGACCTCACTAAGTCTCGTAAGCAGCTGAAAGAGCTGAAGCTGAAACAGTGTGTGGATGGGCTCAGAGAGCAGCAGAAAGGACGGAACACAGCTACATGCAGGTCCACCAGAGACCCCCAGGGGGCGATGGAGCACTACCAGAACAGTAACAATAAACCCTCACTGAAGGAGACTGTCGATAGCCTGAACAAGAGAATGATGGAGAAACGACAGGAGGGACTGCCAGATAACATCAAGgaGATGACTCCGGCTCAGATGGCTGTGGAGAAGTTCACCCTGCAGAAGTGTCTGCTCCACTTTGAGAGCCTGCATGGACGACCGagcACCAGGCAGGAGAAGACTCTGATGAAGCCTTTCTATGATCGCTACCGCCAGGTCAAACAGCAGCTCCTGTGTTCCTCCACCACCATCCCTTTCATCACCACAATAgaggaagaggagtgttCTGATGAAGAGTATGTGAAGGACAGCCCCTGGCTACCTCATACAGCATTGCACTGTGTGTCTTCAGAAGAGTCACTGTGTCTACCACATAACGAGGTAGCCAACACACCTCTCGTGTCGCCTCTGGAGGAGATCAAAAGTCTACATCCACCCAGTGTCACCACAGCAACACTGCACAAGGCATCAAGatcaGAGTTACTGGAGCAGCTGAGGGTGACACGAGCAGAGAAGAAGAGACTCCGTTCAGTACTCCGAGACTTTGAGGACCACTTCTACACACAGACCGACAGGAATGCCCAGAAAGAGGACCGCGGGCCCATGGCAGAGGAGTACTGCGAGTACAAGAACCTAAAAGCAAAACTCCACTTACTGGAAGCCCTGCTCAGTAAACAGGATACTTAGAAGACTGTCTAAGCTTCCTTCACagtgggacttttattttgaaacacTTTTTTACTCATTTATAGGACCTTTAGTTTCTGAACAATTTTCAAAGTGAAATACCGGTACTTCTTGTCATGTTTCATGCCATGGTTACATGGTGATGCACTTTAAATTACTTTGATGTTGACTGACTCTCACTTTGGTTAAGAGTGATGGCAAGATGATACAAGAGTTGCTGGGCGACATCCAACAATTTTTTGTCCCATAACAAGTCCTTTGTTATTTATGATAACAAATGATATTTTATGCAACTGATGGAATTATAATATTTTATGCAACTGATGTAGCGAGTGTAACAGTTTTAAGGAAACAAAGAGAACAAATATAACAGTTGATGTTAGATACATGTTGTCAATTTCTAAGCTATTTTATGACACTATTGTTACTTGCATTTTCTTCTCGCAAAACTATTCTCGGTATAACAGGTGGTGTACTATGTTCAAATGTGGCACTTTGAAAAGTGCAATCTTGGCAAGGAGGATATGTCATCCAAATATACAATCTGACAATCCTGTAGAATATTTGTGTATGTCAATCAGTTTTTAGTCCCACTTTGTACTATGATATGTATTAGTTAATAGTTGACATGATGCATTGTGGCAATTCAAGTTATACATTACCTTggaaaaaaaaaagtgtgaatGTTGGCATAGGGCAAGTTACTCCTGCAGTCAAATGTGTTTTTCATCCCAAAATGCCATTCTTTACTATGATCAGATCTCTTGACATTGTGCACTTCTGGTTTCTATGTATatcagtaaaaaataaatattttcacACTTA

Function

NR:

description
protein FAM13C-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021580607.2 True 2729 mRNA 0.47 10 28139168 28148897

Neighbor

gene id symbol gene type direction distance location
LOC110502532 NA coding downstream 23177 28115595 ~ 28120442 (-)
LOC110502525 LOC106607696 coding downstream 155743 27860092 ~ 27983425 (-)
LOC110502526 LOC106607693 coding downstream 279862 27850104 ~ 27859306 (-)
si:ch211-248a14.8 LOC106608780 coding downstream 685288 27449622 ~ 27453880 (-)
LOC110502517 LOC106607615 coding downstream 703326 27423892 ~ 27435842 (-)
LOC110502533 mot9 coding upstream 32189 28181086 ~ 28197583 (-)
LOC110502534 LOC100380754 coding upstream 55047 28203944 ~ 28227097 (-)
LOC110502535 NA coding upstream 79641 28228538 ~ 28413165 (-)
LOC118943855 NA coding upstream 242743 28391640 ~ 28392295 (-)
LOC110503098 NA coding upstream 323408 28472305 ~ 28480296 (-)
G1850489 NA non-coding downstream 2067 28136564 ~ 28137101 (-)
G1850380 LOC106607701 non-coding downstream 146199 27990184 ~ 27992969 (-)
G1850249 NA non-coding downstream 364766 27774132 ~ 27774402 (-)
G1850248 NA non-coding downstream 366918 27771213 ~ 27772250 (-)
G1850494 NA non-coding upstream 718 28149615 ~ 28149901 (-)
G1850718 LOC106607826 non-coding upstream 315691 28464588 ~ 28466261 (-)
G1850764 NA non-coding upstream 438573 28587470 ~ 28587763 (-)
G1850766 NA non-coding upstream 440541 28589438 ~ 28589658 (-)
G1850778 NA non-coding upstream 444401 28593298 ~ 28593712 (-)
G1850441 NA other downstream 60917 28074925 ~ 28078251 (-)
G1846858 NA other downstream 2698781 25439807 ~ 25440387 (-)
LOC110502462 LOC106607169 other downstream 4793397 23344353 ~ 23358461 (-)
G1843946 NA other downstream 4905745 23182987 ~ 23233423 (-)
LOC110502553 NA other upstream 775842 28919846 ~ 28932600 (-)
LOC110502574 LOC106608078 other upstream 3002712 31151609 ~ 31239202 (-)
G1854905 NA other upstream 3068700 31217597 ~ 31218171 (-)
G1855326 NA other upstream 3831100 31979997 ~ 31981333 (-)
G1855821 NA other upstream 4366169 32515066 ~ 32515408 (-)

Expression


Co-expression Network