Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110502541 |
| gene name | LOC106607837 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 28497576 ~ 28571528 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| AT-rich interactive domain-containing protein 5B-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021580660.2 | False | 4231 | mRNA | 0.52 | 10 | 28497576 | 28571528 |
| TU2118352 | True | 516 | TUCP | 0.53 | 2 | 28498023 | 28525237 |
28,440,000
28,450,000
28,460,000
28,470,000
28,480,000
28,490,000
28,500,000
28,510,000
28,520,000
28,530,000
28,540,000
28,550,000
28,560,000
28,570,000
28,580,000
28,590,000
NC_048587.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502539 | LOC106607826 | coding | upstream | 31286 | 28462455 ~ 28466290 (+) |
| LOC110502531 | LOC106607719 | coding | upstream | 356903 | 28098447 ~ 28140673 (+) |
| LOC110502528 | bic1a | coding | upstream | 419322 | 28001291 ~ 28078254 (+) |
| LOC110502527 | LOC106607701 | coding | upstream | 504387 | 27990245 ~ 27993189 (+) |
| LOC110503097 | LOC106577081 | coding | upstream | 657237 | 27790759 ~ 27848517 (+) |
| LOC110502542 | LOC106607841 | coding | downstream | 26385 | 28597913 ~ 28603119 (+) |
| LOC110502543 | LOC106607859 | coding | downstream | 46979 | 28618507 ~ 28621114 (+) |
| LOC110502544 | LOC106607864 | coding | downstream | 62518 | 28634046 ~ 28652668 (+) |
| slc22a15 | slc22a15 | coding | downstream | 91146 | 28662674 ~ 28671512 (+) |
| LOC110502549 | LOC106608800 | coding | downstream | 205605 | 28777133 ~ 28780702 (+) |
| G1850688 | NA | non-coding | upstream | 2838 | 28494535 ~ 28494738 (+) |
| G1850669 | NA | non-coding | upstream | 29961 | 28467294 ~ 28467615 (+) |
| G1850667 | NA | non-coding | upstream | 36097 | 28461247 ~ 28461479 (+) |
| G1850012 | NA | non-coding | upstream | 266910 | 28228561 ~ 28230666 (+) |
| G1849835 | NA | non-coding | upstream | 590434 | 27895129 ~ 27907142 (+) |
| G1850690 | NA | non-coding | downstream | 79 | 28571607 ~ 28571947 (+) |
| G1850763 | NA | non-coding | downstream | 16199 | 28587727 ~ 28587965 (+) |
| G1850772 | NA | non-coding | downstream | 19951 | 28591479 ~ 28592148 (+) |
| G1850773 | NA | non-coding | downstream | 20666 | 28592194 ~ 28592431 (+) |
| G1850777 | NA | non-coding | downstream | 21861 | 28593389 ~ 28593663 (+) |
| G1849208 | LOC106607606 | other | upstream | 1221317 | 27274338 ~ 27276259 (+) |
| G1845108 | NA | other | upstream | 4143330 | 24326264 ~ 24354246 (+) |
| G1844044 | LOC106607169 | other | upstream | 5151087 | 23345044 ~ 23346489 (+) |
| G1851386 | NA | other | downstream | 471833 | 29043361 ~ 29075998 (+) |
| G1852590 | NA | other | downstream | 1446962 | 30018490 ~ 30025046 (+) |
| LOC110502560 | LOC106607954 | other | downstream | 1975596 | 30547124 ~ 30659333 (+) |
| G1853092 | NA | other | downstream | 2234022 | 30805550 ~ 30806454 (+) |
| G1853162 | rps27a | other | downstream | 2255057 | 30826585 ~ 30834692 (+) |
