LOC110502579 (LOC106608126)



Basic Information


Item Value
gene id LOC110502579
gene name LOC106608126
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 31460669 ~ 31482046 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_036960171.1
AGGCGGAGGATAGTATACAGGCGTCATCCCACTCTCGACTCAGACCAGACGCTTCAACTTTTTATATCAATCGCGAGTGAACTGCTACAGCAAGGAAGTATCCTCAGCTGAGCTGAGATATCCACCCCGGAGACAAAAGAGTCGAACGCTTTCCCCCCTCCTTCAAGCAACGTATATTTTGTAGGGGATCTGTTTTTACAAGGCGGAACCACTATTCTTTCGATGTTGACATCGTAGTTTTCTGATTAAAAAGGCATTGGACTCTAAACTTTTGCGTTTAGAGCGTATGTAAGAAGTTCAAAAGCGGATATTCAGATATTTTACCGTTATTAACAACTGTTATGTCGCGCTACTGAAGCTGTTTAGGACATGTCCAGACGACAAAATCAGTCCAATGGCTCGACCATCCTAATTGAGAGAGGGAAATACGGAGAATTGAATCCCGGTGGCGGAGCAGCCTCTGGTGCCGAACCGACTGACAACCCCCAGTTCAGCGAAGGGGAGCAGCAGTCACGGGGAGGAATAATGATGCCGAATAGTCTGCTTGGTTTCCAGTCGAGGTCGCCGTTGTTCAGAACACTGTCCAGGTCATCCAGTGGATATTTTTCGTTCGACAGCGATTCTATTCCAAGCTCCCCGCTATTGAAAGATAAATCGACACAGACTCCGAGCCCATCTAGCCAAGTCATGACTCACGCACTGCAGCGCATGTCTCAAGCACAGGAGACCAATCGAGATTATGACGCGTGGCCCAACCTCCTCCACTCCTATAGACCACGGCCACCGCCAACTGCAGGGGACATGTGGCCAGAGACACTGATTGGCCAGGAGCTTCAGCGCATTGGAGATGAGTTTAACGATCACTTCATACATGGGCGCCCTGCTGGCAGAAACGGTCAAGTTGCCCAGGCAAACCTGCAGGAGATGCACCAAGAGCCCGCCTTCCTACTGTGGATGGGGCTCCTGATTGGACGACTATTACAGATCATCTTGCAGAGAAGATGATGGGTAGACAGAAGCCTCAATCCCATTCCTGCAGCACCCagcagtcacatactgtagcacCTGGGAGAATTCTGTCAAAAGACCCTGTACATATGTGATTATATAAAATGCTACATTTTCAGAATGGATCCTCCTGCATATGTGGACCTATACAAATGTGTCTTGATAGTTTTTAACCTTGAATTGGCTCAAGATTCCCTGATCCAGGATAAGTTGGAATAGGGAATTTGTACAGCTTTGGAGAATACTTTCTTTGGGAATTCTACAACAACTGGAATTTTGCAGGAAACTGCTCAGATTTGGAAAGCTGAGCCTAATCAAACCACCAAAGATGGAGTGTCCTGTTGCAGAGCACTCACAGGGATAATGCCATGTGGATAATGCTTTGTGGAGGTTACATGTGCCTTGTACAGTTTCTCGCTTTTTTACTAAGCTGTTTTATTTTTCTTGCAGCTATTTCTTTTTCACCTCTGTATTTCATTTGTTTGTGAGTTTGCCCATGGTCAGATGTGTCGAGTCTGCGCGGTGCCTGTTCCTCCGGGTTCTCATGGCTTCTCACGGTTTCCTTTCCTCATCCAAACATCATCTGCAATTCTAATTTGATGCAACCAGTTCCACGGCCGCTTCCATTGACCCAGACATTTAAATCTTAATATTAAATAGGAAATTATTTGTAAGcaccattttttaaatgtattttctttcCAAACATATTCAGTACAATAGCAAGGATGTTAGTAGTAATTGTAAGAACAACAACAGCTAAAAACATTGATAGCAAATACAATGCCTAAAATAATCATATTTAATTAAATTAAAGTACATGAATTAGGGCAAATAATGTAAGTTCTTGAAACAACTTATTTTACTGTTGTCTCACTTGTTTAACCCTGCCCCTTTTCAGATGTCAAACATAATTGCTGTTATCATTTAGCATTTAGCTTGGACAGGCTGTTGTCGGGGCTTTCATAGCCCAGCTGACACTCATGTTGGCCCGGCCAAGTCCTTCACAGCGCTGCCAGGTCATTAAATGCTCATAGAAGCTTTGCTGGAAGAGAACCAAACTCTGAGCACCAGGGGAGCAGGGCTTTGTCAATGGAGAGCCatgagctaacattagccagAGGAACAGGCAGAGAGAGCCAATGGGTTCAATACAGGTTTTAATGGATGGGATGACTTGCAGTGGTTGAGAACTGAGATCGATAGACAGGGATAAAAACCACCCAACAACCTGGAAGGATCTATATCCAAATTCTTGAAAATGTGTTGTATTTCTGATCTGTGGTAGTATGAATGGGTTTtttaaggcccagtgcagtcaaaatcctgtttttcctgtgttttgatgaaactatccctttaaaagtGTGAAAGAATTTGAGGCAGTATAAGTTAATATAtaccaataacaaagagttccAACCTCTTTGCCAATAACAGTTAGTTTTCAGATTACATACTCAGACCACTCCAACAGTCCTAACAAAATTATTGCTAGAGAAATAGTTTTTGCTAAAAGGCTATTTTTGTTTCCTTTTTACAGTTTTAATGGAAAACTATTACAGTAAGGCACttgcttaattgttacccagaaattatttgatattgagataaaaacagatgcattgggcctttaaggaAAAACAAAAATTGAAGTAGGATTACTTTGAATGTTACATGTTACCACATTGTGCACCATGGGTTGGTTGGAAATGTTATGTGTCCTCTTGTGTGAGCCAAAGATGGATTACACTGTAATTTTGCTGGTTAGATCTtattgtatagtacagtataggcGTGGTTCAGTCCAACTGCCTTGGCCACCCTTTTGATTCCATTGCCTCATATTTGTCAGTCTGAcagtatttgatttgaaaattCATTTCACACCCACAGTTCAATAAATGTTATCCATGGAATTAAATGTTAACGGTATAAAATGTGCTGATAAAAGCCTATCTTTAACATAACATAGCACTTACAGCTCATTAGAGGTTTTAATTGCCAAACATCTGCCTTTTagaattttttatttaaaaaaaacaaaaaaaattgccAATCATGTAGACAAAATGTAAGGTATTAGTTGATGAAATTATCTGCAAACCAAATTTTTATTGAGAAGCGTATCATTCCGTCATGTTCTTCTTTGTACCAAAATTGTACTGCTCGGCCATGTATTTTATATATTGTATTGTCTTTTCTTTTTTGGTGTTGTCAAATGAAACCAAAGACCTCATTTCAAAGTTGTGTATCTCAGAAGGGTGTAGTCGAGTCTAGTGGCTTTCCAAGAGAACAACTGAAAGCTGAATTTTCACCTTCTGAAACTGATATGGAAACTTCTCAGACAGTCAGCCAATGGTTCCATGTACTCTAGATATCAATCCATTGAGTGACAGCATAGTCCATACTGTCCATACTTCTTAATGGGTAGAGACCAGACCATAGATAGAAATAGCATTTTTCCCAGACACATACAATAACTTAATTTTGATCCGCAACATTCCCAAGTTGTCCTTAGCAAGAGCCATGAATTTCAACCAGTGTCATCTTGGTGGAGGAAGTGCAGGTGTGTCCCTCTTGCACTATGATTACTGTCCCAGAATTCTGTCTGTTCAGGACCCTTTTTGCACTGAGCGCAGACTGACATAAACTGATTTATCTGACTCACAGGACCCAGTACATTTGTAGCAAAATGTAAATTTCTTTCAGTTTTTTTTGCACTGAAATGTTTTAAGGTTGTGATTTAAATTGTGCATAATGCTGTGCCTGTATAAAGCTTTTTTTCatctttttaaaaa

Function


NR:

description
bcl-2-like protein 11

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_036960171.1 True 3809 mRNA 0.41 4 31460669 31482046

Neighbor


gene id symbol gene type direction distance location
LOC110502577 LOC106608097 coding upstream 80445 31356447 ~ 31380224 (+)
LOC110502572 LOC106608074 coding upstream 268454 31189350 ~ 31192215 (+)
LOC110502570 rtn10 coding upstream 551349 30874810 ~ 30909320 (+)
LOC110502565 LOC106607988 coding upstream 643981 30728388 ~ 30816688 (+)
LOC110502563 LOC106607969 coding upstream 777945 30666544 ~ 30682724 (+)
LOC110502584 LOC106608814 coding downstream 138352 31620398 ~ 31624184 (+)
LOC110502586 LOC100196543 coding downstream 171312 31653358 ~ 31718950 (+)
morn2 morn2 coding downstream 384273 31866319 ~ 31869743 (+)
LOC110503062 arhgef33 coding downstream 389688 31871734 ~ 31891533 (+)
LOC110502597 LOC106608325 coding downstream 487911 31969957 ~ 31976036 (+)
G1853439 slc30a6 non-coding upstream 123329 31328387 ~ 31337340 (+)
G1853427 NA non-coding upstream 207534 31252750 ~ 31253135 (+)
G1853416 NA non-coding upstream 225595 31234498 ~ 31235074 (+)
G1853414 NA non-coding upstream 227917 31232519 ~ 31232752 (+)
G1853413 NA non-coding upstream 230230 31230096 ~ 31230439 (+)
G1853587 NA non-coding downstream 7335 31489381 ~ 31489691 (+)
G1853591 NA non-coding downstream 10258 31492304 ~ 31492662 (+)
G1853593 NA non-coding downstream 11422 31493468 ~ 31493727 (+)
G1853637 NA non-coding downstream 60377 31542423 ~ 31542807 (+)
G1853761 LOC100380671 non-coding downstream 248670 31730716 ~ 31731458 (+)
G1853162 rps27a other upstream 628226 30826585 ~ 30834692 (+)
G1853092 NA other upstream 654215 30805550 ~ 30806454 (+)
LOC110502560 LOC106607954 other upstream 807453 30547124 ~ 30659333 (+)
G1852590 NA other upstream 1435623 30018490 ~ 30025046 (+)
G1851386 NA other upstream 2384671 29043361 ~ 29075998 (+)
LOC110502602 LOC106608363 other downstream 1020323 32489267 ~ 32530254 (+)
G1855733 NA other downstream 1026192 32508238 ~ 32509474 (+)
G1855723 NA other downstream 1036881 32518927 ~ 32519677 (+)

Expression


LOC110502579(LOC106608126) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
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LOC110502579(LOC106608126) Expression in each Bioproject

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LOC110502579(LOC106608126) Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network