LOC110502585


Basic Information

Item Value
gene id LOC110502585
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 31638651 ~ 31643143 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021580729.2
TTGGTTTGTGACATTTTGGATACGGATTTCAAAGGTGCAGCGAACTGGCGCTTTTTCCATATTTTCCTCATTCAAGTATCAAGAAAGTTTCCGAACCCAGTCTAGCTGCTAATGTCGGTGGCAGACCAGAAATAGGTGAAGTTACCTTAAAGGGATACAGTTTGTGAAGTCAATGAAAAATGAAGTGTCAGTCCAACAACAATGAACTCCGGTTTGCATGCGACATGGAGAAACATGTCACATACAAGGAGTCAGGCCTCTTAACCTCACCACTCATGGGATGCATCCAATTAGTAGTCAAACAACTTTCTCCAGGTGTCACCTCTGCCAACATTTGCCTCAACGATGATGTGCAAGGTGTTCACAATAAGGAGAACAACCAATATGACCGTATCCTTGACGAGGTGAACCTAGGCTGTGAAGCATTCGAGGACAGCGGTTACCTGTCTTTACAGAACAGCCAGATGGAGGACTTTTATAATGTTAAGGAACAAAGGAAGTCTCTAGGACTGGAGATATTCTCCCCATGTCCTCCAGTTGCTGATTGTCACAAGGCTAAGCACTCTGCCTCTCAACTCCCAATACTGAAGTTTCAACATGCCATATGCCAAGAACTCACCAATAGCTTCAAGAGGACCCAGAGCTATGACTGGACTGTCATTAGCTGGCTAGCAGAGGGCTCTGGCCTTGAAAGGGTTATTGGTGGGAACATGGGCCTTGAGTTTATGGATGTTTTAAAAGCGCTGCTGGAGAGGGACATGAAGCACATCCTAACCAGGATCCTGTGTCTTCTTGATGTTGACTTGATAAGCTGTAGAAAAGTGAGCAAGAGCTGGAGAAAAATAATCTGCCAAGACAAGTCTGCACTCCGTAAATGTGACCAGGCTGAACAGAGACTACAGGACTCAAGAATCCCCGTAGGACTGGAGAATGTGGGTTTTTTGACGAGAGACACCACCCTGTCCAGGGTTGTATTGTCCTGTATGCAGAGAGTAGCTTCAACCCCTATCCAGAAGTCTACCAAGAGGATGCTCTCCCAGAGAGCATGCACGCAGGCGCCATACTGCTCCCACCAATCTCGCTTCAGAGAATACCAAGAGGCTGCCAGTTTGCTGAAGCAGCACGAGTCGCTGAAGCCCTGTAAGCGCTGCGGCTCTCCAGCCAAGCACAATGCAGACGCAATGAGGGCCACCTGTACCCGCTTTAGTTGTGCCTTTGACTTCTGCACCCAGTGCCAGGGCCCCTTCCACGGCTCCTCAACCTGCTGCACCCGGCTGACATGGCGGCCTAGCAGCTCCACAGCCACCCCCATCCTCATTGGCAGCGCTCGCAGCAAGAGGAACGTCAGGCGCCTGTGAGATGAACGCAGCCTGGGATAAGACCCAATCGCTCACCTTTTAAAACTaaccatttttatggaatatttgttttattcataGCCCTTTTAGCCCACTACCGCCTCCGCCGAAGACCAAAGGTATCTTGGATATTGGAATACTCTGCATTAGAGTAGACTGTATTCTGAGGCAATCAAGTGATTCCAGTTGTCTGACAATGTCGTCAGAAAGCGACAATTGTACTGGAAGCCCCAAAAAAGAACATCCCACTGGATGCAGAGGAATTTTTCCTAGACTTGTATTTTACTTGATGAAATGTCCTTGTCGTATATTTGTACATATTTTAAATGTGAGATATGTAAATATTTATATTGTTTAAATAAATGCCTCTTGGGA

Function

NR:

description
F-box only protein 5-like

GO: NA

KEGG:

id description
K10292 FBXO5, EMI1; F-box protein 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021580729.2 True 1733 mRNA 0.47 5 31638651 31643143

Neighbor

gene id symbol gene type direction distance location
LOC110502583 LOC106608142 coding downstream 23507 31559814 ~ 31615144 (-)
LOC110502582 NA coding downstream 81201 31519954 ~ 31557450 (-)
LOC110503101 LOC106608102 coding downstream 201424 31423227 ~ 31437297 (-)
LOC110502576 znt6 coding downstream 300750 31255071 ~ 31337901 (-)
LOC110502574 LOC106608078 coding downstream 399449 31151609 ~ 31239202 (-)
LOC110502587 LOC100380671 coding upstream 81432 31724575 ~ 31745791 (-)
LOC110502589 hnrll coding upstream 119681 31762824 ~ 31817656 (-)
galm galm coding upstream 188237 31831380 ~ 31854369 (-)
LOC110503102 NA coding upstream 212789 31855932 ~ 31865936 (-)
LOC110502596 LOC106608247 coding upstream 248836 31891979 ~ 31959446 (-)
G1855089 NA non-coding downstream 145560 31492846 ~ 31493091 (-)
G1855085 NA non-coding downstream 152398 31486004 ~ 31486253 (-)
G1855029 NA non-coding downstream 222882 31412591 ~ 31415769 (-)
G1854967 NA non-coding downstream 230782 31403291 ~ 31407869 (-)
G1855210 NA non-coding upstream 78516 31721659 ~ 31721866 (-)
G1855107 NA non-coding upstream 80464 31723607 ~ 31724230 (-)
G1855213 NA non-coding upstream 103681 31746824 ~ 31747044 (-)
G1855219 NA non-coding upstream 113749 31756892 ~ 31757098 (-)
G1855222 NA non-coding upstream 115765 31758908 ~ 31759569 (-)
G1854905 NA other downstream 420480 31217597 ~ 31218171 (-)
LOC110502553 NA other downstream 2706106 28919846 ~ 28932600 (-)
G1850441 NA other downstream 3560400 28074925 ~ 28078251 (-)
G1846858 NA other downstream 6198264 25439807 ~ 25440387 (-)
G1855326 NA other upstream 336854 31979997 ~ 31981333 (-)
G1855821 NA other upstream 871923 32515066 ~ 32515408 (-)
G1855822 LOC106608363 other upstream 872606 32515749 ~ 32516281 (-)
G1856217 NA other upstream 994282 32637425 ~ 32646140 (-)
LOC110502621 LOC106608559 other upstream 1953015 33590457 ~ 33601995 (-)

Expression


Co-expression Network