Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110502609 |
| gene name | ppa1 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 32983472 ~ 33000172 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| ppa1 | Predicted to enable inorganic diphosphatase activity and magnesium ion binding activity. Predicted to be involved in phosphate-containing compound metabolic process. Located in extracellular exosome. |
| description |
|---|
| PREDICTED: inorganic pyrophosphatase |
| id | name | namespace |
|---|---|---|
| GO:0006796 | phosphate-containing compound metabolic process | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0004427 | inorganic diphosphatase activity | molecular_function |
| GO:0000287 | magnesium ion binding | molecular_function |
| id | description |
|---|---|
| K01507 | ppa; inorganic pyrophosphatase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021580784.2 | True | 1310 | mRNA | 0.46 | 11 | 32983472 | 33000172 |
32,972,000
32,974,000
32,976,000
32,978,000
32,980,000
32,982,000
32,984,000
32,986,000
32,988,000
32,990,000
32,992,000
32,994,000
32,996,000
32,998,000
33,000,000
33,002,000
33,004,000
33,006,000
33,008,000
33,010,000
NC_048587.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502603 | LOC106608383 | coding | upstream | 337299 | 32572446 ~ 32646173 (+) |
| LOC118943948 | NA | coding | upstream | 408579 | 32574841 ~ 32574893 (+) |
| LOC110502602 | LOC106608363 | coding | upstream | 454272 | 32489267 ~ 32530254 (+) |
| mrps5 | LOC106608355 | coding | upstream | 508820 | 32448786 ~ 32474652 (+) |
| LOC110502597 | LOC106608325 | coding | upstream | 1007436 | 31969957 ~ 31976036 (+) |
| LOC110502610 | LOC106608453 | coding | downstream | 258 | 33000430 ~ 33019500 (+) |
| LOC110502611 | trmt2b | coding | downstream | 166142 | 33166314 ~ 33179381 (+) |
| LOC110502614 | LOC106608500 | coding | downstream | 193273 | 33193445 ~ 33205110 (+) |
| wnt8b | LOC106608511 | coding | downstream | 227576 | 33227748 ~ 33236137 (+) |
| LOC110502616 | LOC106608512 | coding | downstream | 252231 | 33252403 ~ 33286727 (+) |
| G1856077 | NA | non-coding | upstream | 7628 | 32971029 ~ 32975844 (+) |
| G1856076 | NA | non-coding | upstream | 12580 | 32969532 ~ 32970892 (+) |
| G1856109 | NA | non-coding | upstream | 25225 | 32957889 ~ 32958247 (+) |
| G1856094 | LOC106577218 | non-coding | upstream | 41425 | 32937907 ~ 32942047 (+) |
| G1856069 | NA | non-coding | upstream | 75464 | 32905025 ~ 32908008 (+) |
| G1856096 | NA | non-coding | downstream | 19395 | 33019567 ~ 33022036 (+) |
| G1856382 | NA | non-coding | downstream | 30982 | 33031154 ~ 33031480 (+) |
| G1856392 | LOC106608472 | non-coding | downstream | 38516 | 33038688 ~ 33097714 (+) |
| G1856393 | NA | non-coding | downstream | 42579 | 33042751 ~ 33050277 (+) |
| G1856456 | NA | non-coding | downstream | 138703 | 33138875 ~ 33219826 (+) |
| G1855723 | NA | other | upstream | 463795 | 32518927 ~ 32519677 (+) |
| G1855733 | NA | other | upstream | 473998 | 32508238 ~ 32509474 (+) |
| morn2 | morn2 | other | upstream | 1113782 | 31866319 ~ 31869743 (+) |
| G1856720 | LOC106577204 | other | downstream | 339847 | 33340019 ~ 33343612 (+) |
| G1856836 | NA | other | downstream | 519310 | 33519482 ~ 33519816 (+) |
| LOC110502624 | LOC106608565 | other | downstream | 554145 | 33554265 ~ 33590741 (+) |
| G1857224 | NA | other | downstream | 776133 | 33776305 ~ 33776741 (+) |
