LOC110502623 (LOC106608550)


Basic Information

Item Value
gene id LOC110502623
gene name LOC106608550
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 33602518 ~ 33617557 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021580804.2
CACAGAATGAATTACCAACTGTAAGAAGAGCAGTGGACTAGAGGATTGTCTCTGCAGACAGCATTAGAGGTGGTTGCTGCTACTTTATTGAGAGGAGTTCTGGCGACTCCAAAGTGCTTTTCAAAATGAAATTTGACAATGTCCTCTCAGAAATCAATGGATTTGGTAAATTCCAAACAATGATCGTCCTGATTCAGAGCCTCTCTCGCATGACCCTGCCATGTCACTTCTTACTGAATAACTTCATAGCTGCTGTGCCCTCTCACCACTGTGACCTCAGCGCTCTGGATGAAGAGGGTGTCTTTGGGAATCTGACCCAGGAGCAGAGACTGACTGTCAGTATTCCAGTACAGGAAGATGGGACTCCAAGCTCCTGCAAGATGTTCCCAGAACCCCAGTTCAACCTCCTGTCCAACTCAAATGACAGTGACCTAACTACAGTCCCCTGTCAGAATGGATGGGTATATGACAACAGCACCTTCAAATCCACTCTGACTACAGAGTGGGACCTTGTATGCGATAGAAAAGGGATGAACAAAGCGACAGCCACCATTTTCTTCATTGGAGTAATGTGTGGGGCTCCTTTATTTGGTTTCCTCAGTGACAGATTCGGCCGGAGGGCAATGCTGATGGTGGCTTACCTAGGAACTATGGTGTTTGCTTTTACCAGTGCCTTCTCCACCTCCTATGTCATGTTTTGTATCATGAGATTTTTCACCGGAGTGACACTATCTGGAATAAGCATAATCTCCATTGTACTCAGTGTGGAATGGTTTGACATTCAACACAGGACATTTGCTGGAGTGATAGTAAGCCTGGATTGGACAGGTGGAAACATGCTGCTAGCTAGCATTGCATACTTTGCGAACGACTGGAGGTGGCTGACCATAGCAGTTACCTCGCCTCTTGTCTTGGCTGTCATTACCTGGTGGTGGCTTCCAGAGTCTGCTAGATGGCTCTTAGCGAATGGAGAAAAAGAAAAAGCCCATTTCTACCTGGAGAAATGTGCCAAGATGAACAACAGATCCAAGTGTATGGCTGAGATCACACCACAGACCCTTACGAATGCAGCAAGAGTTAAAGATGAGGAGAAGAAGTACGGTTTTGTGGACCTTGTGAGAACTCCAAATATAAGGAAACTTGCCATTTGCACAGGAATACTATGGTATGGAGTTGCGTTTACATATTACGGCATCAGCTTGAACATCACTGGGTTTGGCATGAATGTCTACTTCACACAGTTCATATATGCTGCCATCGAGTTGCCTGGAAAGATTATGGTCTATTATTTCTTGAACAAGTTTGGCCGAAAACCTGGACAGGTTGGGACACTGCTTTTGACTGGAACCTGTGTCTTCATCAACATATTTGTTCCTCAAGGTTTGTGGGTGTTTCGTACCATCGTGGGTCTTTTTGGGAAAGGCCTGTCCGAAGCATCCTTCACAATAATGTTCCTTTATACCACTGAGCTCTACCCAACAGTAGTTCGGCAGAACGGCGTTGGCTACACCTCTTTTGTTGGTCGGCTAGGCGTGTCCATCGCTCCCCTCATCGCCCTATTGGACGTTGTGTGGGAGCTCCTCCCTGCTTTGATATATGCCTTGGTGGCTGTTGGTACCGGACTAGTGGCTTTGCTCCTCCCAGAAACACTCAATGTTCGCCTGCCAGAGTTCATCGAGGACATAGAAAAACCAAGAGCGGAACTGGATGGAGAGAGTGGCAATCCACTGAAGCAAGCTGATGAAAACAGGAATGGAAATGGAACAGTTGAGGTTACATGAATCCACGCAGAGATCCTATTAGATTATAAAAGGATTAGTTATGTAGTTATATGTGAATCCATGTCACTCAGAGAGACAGTCGTTTTCAAGCAAGTGTATGATAGATGGACAGAGCAGAATATCTACCTAGAAGAAATATAATGGATGGACCAAAATGGATGGATGGACTATTACTTACCTGTTTATTACTTGGTGAAAGATAGATCAATTGTAGCCCATTTTTCTTACATGGTCATTATTGAATCTACTGTTTTGTTCTTCATAAATactggtgtttgtgtgtcttaCTATGTGGCTTTGCAATAAATCTGTGTAATATA

Function

NR:

description
solute carrier family 22 member 7-like

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0022857 transmembrane transporter activity molecular_function

KEGG:

id description
K08204 SLC22A7, OAT2; MFS transporter, OCT family, solute carrier family 22 (organic anion transporter), member 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021580804.2 True 2101 mRNA 0.45 10 33602518 33617557

Neighbor

gene id symbol gene type direction distance location
LOC110502621 LOC106608559 coding downstream 523 33590457 ~ 33601995 (-)
hhat hhat coding downstream 52088 33441958 ~ 33550430 (-)
LOC110502617 LOC106608514 coding downstream 272240 33286841 ~ 33330278 (-)
dnajb12a LOC106608494 coding downstream 436191 33153873 ~ 33166327 (-)
LOC110503103 LOC106608472 coding downstream 461299 33038670 ~ 33141219 (-)
LOC110502626 LOC106608577 coding upstream 39931 33657488 ~ 33663402 (-)
ifit8 LOC106608578 coding upstream 46531 33664088 ~ 33671763 (-)
LOC118943903 NA coding upstream 67113 33684670 ~ 33687696 (-)
znf503 LOC106608619 coding upstream 215510 33833067 ~ 33836044 (-)
kcnma1a LOC106613356 coding upstream 559499 34177056 ~ 34469529 (-)
G1857084 NA non-coding downstream 46171 33554251 ~ 33556347 (-)
G1857003 NA non-coding downstream 50591 33551702 ~ 33551927 (-)
G1857000 NA non-coding downstream 57536 33544766 ~ 33544982 (-)
G1856988 NA non-coding downstream 71127 33531071 ~ 33531391 (-)
G1856980 NA non-coding downstream 78531 33523764 ~ 33523987 (-)
G1857117 NA non-coding upstream 3934 33621491 ~ 33622187 (-)
G1857134 LOC106608573 non-coding upstream 26415 33643972 ~ 33650815 (-)
G1857290 NA non-coding upstream 152378 33769935 ~ 33770199 (-)
G1857295 NA non-coding upstream 159771 33777328 ~ 33777586 (-)
G1857302 NA non-coding upstream 173269 33790826 ~ 33791122 (-)
G1856217 NA other downstream 956378 32637425 ~ 32646140 (-)
G1855822 LOC106608363 other downstream 1086237 32515749 ~ 32516281 (-)
G1855821 NA other downstream 1087110 32515066 ~ 32515408 (-)
G1855326 NA other downstream 1621185 31979997 ~ 31981333 (-)
G1858519 NA other upstream 1203219 34820776 ~ 34821565 (-)
G1858575 LOC106613168 other upstream 1222343 34839900 ~ 34841662 (-)
G1858636 NA other upstream 1319132 34936689 ~ 34968861 (-)
G1859038 NA other upstream 1625557 35243114 ~ 35243589 (-)

Expression


Co-expression Network