LOC118943903


Basic Information

Item Value
gene id LOC118943903
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 33684670 ~ 33687696 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039250.1
TGGAGCTGTCTCCGGAAATGTCCCCGTTTTTAACTGTGCGTTAAAAACAGACTGCAAAGTGAAATAATATTTTACTTGGCAAGAAAGGCCGGGCAGCAAAGCCTACTGGTTGACGTCTCAATCACGTTGTGCTTGTTTTGTCCCAGCAGGAGGGGCTGCTCGCTATATCAGCTTCATTATCTCTTCTACTGACTACTTGCTCGCGCTAGTTTTAGAGAAAACTGCTGTGGAAAACTCAGCCAAAGCTAGCAAGTGTCAAGTGAATCCACAACATCACTACAAACGTCTTTTCAAGCCAGCGGGGGATCAACGGCAGTGGCAGAACATCAACAGACGACAAAGCATAAAGCCTATCTGATTGGCCATGTTGGTATGCCCTCTGTCACCACATTCTTCAAGAAGGCACTGTGGAGTGGTAAAGTGGATGACCCTGCTCCTGATGACCTGACCTCCCAGGCAGTGGACAAGCTCAACAAAAACCTCCACAACGACCAGGGGATCGATCTGAGCATGCTCACTGTGGGCGATGGACTCACCCTGGCCATCAAacgctaatcaaatcaaatcaaatgttattggtcacatacacatggttaatgtgagtgtagcgaaatgcttgtgcttctggttctgacagtgcagtattatctaacaagtaatctaacaattccccaacaactacttAATACAtctaaaaggggtgaatgagaaaatgtacacataaatatatggatgagcgatggccgaggggcataggcaaggtgcaactagaaggtataaaatacagtatgattcatatgatatgagtaatgtaagatatgtaaacattattaaagtggcattgtataaagtgactagtgatccatttgttaaggTGGCCAGTGATTGGATctccatgta

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0008171 O-methyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039250.1 True 900 mRNA 0.44 3 33684670 33687696

Neighbor

gene id symbol gene type direction distance location
ifit8 LOC106608578 coding downstream 12907 33664088 ~ 33671763 (-)
LOC110502626 LOC106608577 coding downstream 21268 33657488 ~ 33663402 (-)
LOC110502623 LOC106608550 coding downstream 67113 33602518 ~ 33617557 (-)
LOC110502621 LOC106608559 coding downstream 82675 33590457 ~ 33601995 (-)
hhat hhat coding downstream 134240 33441958 ~ 33550430 (-)
znf503 LOC106608619 coding upstream 145371 33833067 ~ 33836044 (-)
kcnma1a LOC106613356 coding upstream 489360 34177056 ~ 34469529 (-)
dlg5a LOC106613304 coding upstream 786665 34474361 ~ 34535648 (-)
LOC118943866 NA coding upstream 811111 34498807 ~ 34501154 (-)
anxa11a LOC106613295 coding upstream 860940 34548636 ~ 34573061 (-)
G1857134 LOC106608573 non-coding downstream 33855 33643972 ~ 33650815 (-)
G1857117 NA non-coding downstream 62483 33621491 ~ 33622187 (-)
G1857084 NA non-coding downstream 128323 33554251 ~ 33556347 (-)
G1857003 NA non-coding downstream 132743 33551702 ~ 33551927 (-)
G1857000 NA non-coding downstream 139688 33544766 ~ 33544982 (-)
G1857290 NA non-coding upstream 82239 33769935 ~ 33770199 (-)
G1857295 NA non-coding upstream 89632 33777328 ~ 33777586 (-)
G1857302 NA non-coding upstream 103130 33790826 ~ 33791122 (-)
G1857310 NA non-coding upstream 117041 33804737 ~ 33804971 (-)
G1857281 NA non-coding upstream 150066 33837762 ~ 33838320 (-)
G1856217 NA other downstream 1038530 32637425 ~ 32646140 (-)
G1855822 LOC106608363 other downstream 1168389 32515749 ~ 32516281 (-)
G1855821 NA other downstream 1169262 32515066 ~ 32515408 (-)
G1855326 NA other downstream 1703337 31979997 ~ 31981333 (-)
G1858519 NA other upstream 1133080 34820776 ~ 34821565 (-)
G1858575 LOC106613168 other upstream 1152204 34839900 ~ 34841662 (-)
G1858636 NA other upstream 1248993 34936689 ~ 34968861 (-)
G1859038 NA other upstream 1555418 35243114 ~ 35243589 (-)

Expression


Co-expression Network