LOC118943866


Basic Information

Item Value
gene id LOC118943866
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 34498807 ~ 34501154 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039173.1
CTCCTCTCTACCCCAGACAGTGGTATAGGTCTGAAGTGTGTAATACATATTgtattctcctctctactccagacagtggtatagGTCTGAAGTGTGTAATACATATTGTATTCTCCTCTCTACCACAGACAGTGGTATAGGTCTGAAGTGTGTAATACATATTgtattctcctctctactccagacAGTGGTATAGgtctcctctctactccagacagtggtataggtctcctctctactccagacagtggtataggtctcctctctactccagacagtggtataggtctcctctctactccagacAGTGGTATAGGTCTGAAGTGTGTAATACATATTGTATTGTCCTCTCTACCACAGACAGTGGTATAGGTCTGAAGTGTGTAATACATATTgtattctcctctctactccagacAGTGGTATAGGTCTGAAGTGTGTAATACATATTgtattctcctctctactccagacAGTGGTATAGGTCTCCTCTATACTCCAGACAGTGGTATAGGTCTCCTCTCTACCCCAGACAGTGGTATAGGTCTGAAGTGTGTAATACATATTGTATTCTCCTCTCTACCCCAGACAGTGGTATAGGTCTGAAGTGTGTAATACATATTGTATTCTCCTCTCTACCCCAGACAGTGGTATAggtctcctctctactccagacAGTGGTATAGGTCTGAAGTGTGTAATACATATTGTATTCTCCTCTCTACCCCAGACAGTGGTATAGGTCTCCTCTCTACCCCAGACAGTGGTATAGGTCTGAAGTGTGTAATACATATTGTATTCTCCTCTCTACCCCAGACAGTGGTATAGGTCTCCTCTCTACCCCAGACAGTGGTATAGGTCTGAAGTGTGTAATACATATTgtattctcctctctactccagacAGTGGTATAGGTCTGAAGTGTGTAATACATATTGTATTCTCCTCTCTACCCCAGACAGTGGTATAGGTCTGAAGTGTGTAATACATATTGTATTCTCCTCTCTACCCCAGACAGTGGTATAGGTCTGAAGTGTGTAATACATATTGTATTCTCCTCTCTACCCCAGACAGTGGTATAggtctcctctctactccagacAGTGGTATAGGTCTGAAGTGTGTAATACATATTGTATTGTCCTCTCTACCACAGACAGTGGTATAGGTCTGAAGTGTGTAATACATATTGTATTATCCTCTCTACTCCAGACAGTGGTATAGGTCTGAAGTGTGTAATACATATTGTATTCTCCTCTCTACCCCAGACAGTGGTATAGGTCTGAAGTGTGTAATACATATTGTATTCTCCTCTCTACCCCAGACAGTGGTATAggtctcctctctactccagacAGTGGTATAGGTCTGAAGTGTGTAATACATATTGTATTGTCCTCTCTACCACAGACAGTGGTATAggtctcctctctactccagacagtggtataggtctcctctctactccagacAGTGGTATAGGTCTGAAGTGTGTAATACATATTgtattctcctctctactccagacAGTGGTATAGGTCTGAAGTGTGTAATACATATTgtattctcctctctactccagacAGTGGTATAGGTCTGAAGTGTGTAATACATATTgtattctcctctctactccagacAGTGGTATAGGTCTCCTCTATACTCCAGACAGTGGTATAGGTCTCCTCTCTACCCCAGACAGTGGTATAGGTCTGAAGTGTGTAATACATATTGTATTCTCCTCTCTACCCCAGACAGTGGTATAGGTCTGAAGTGTGTAATACATATTGTATTCTCCTCTCTACCCCAGACAGTGGTATAggtctcctctctactccagacAGTGGTATAGGTCTGAAGTGTGTAATACATATTGTATTCTCCTCTCTACCCCAGACAGTGGTATAGGTCTCCTCTCTACCCCAGACAGTGGTATAGGTCTGAAGTGTGTAATACATATTgtattctcctctctactccagacAGTGGTATAGGTCTGAAGTGTGTAATACATATTGTATTCTCCTCTCTACCCCAGACAGTGGTATAGGTCTGAAGTGTGTAATACATATTGTATTCTCCTCTCTACCCCAGACAGTGGTATAGGTCTCCTCTCTACCCCAGACAGTGGTATAGGTCTGAAGTGTGTAATACATATTGTATTCTGCTCTC

Function

NR:

description
PREDICTED: uncharacterized protein LOC107395943

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039173.1 True 2172 mRNA 0.43 3 34498807 34501154

Neighbor

gene id symbol gene type direction distance location
kcnma1a LOC106613356 coding downstream 29278 34177056 ~ 34469529 (-)
znf503 LOC106608619 coding downstream 662763 33833067 ~ 33836044 (-)
LOC118943903 NA coding downstream 811111 33684670 ~ 33687696 (-)
ifit8 LOC106608578 coding downstream 827044 33664088 ~ 33671763 (-)
LOC110502626 LOC106608577 coding downstream 835405 33657488 ~ 33663402 (-)
anxa11a LOC106613295 coding upstream 47482 34548636 ~ 34573061 (-)
LOC110502637 LOC106613187 coding upstream 293187 34794341 ~ 34810118 (-)
slc25a16 slc25a16 coding upstream 321866 34823020 ~ 34837641 (-)
LOC110502644 LOC106613146 coding upstream 414348 34915502 ~ 34936389 (-)
LOC110502648 LOC106613093 coding upstream 551742 35052896 ~ 35059019 (-)
G1858185 NA non-coding downstream 212601 34139058 ~ 34286206 (-)
G1858244 NA non-coding downstream 230619 34267374 ~ 34268188 (-)
G1858125 NA non-coding downstream 448476 34044775 ~ 34050331 (-)
G1858123 NA non-coding downstream 452290 34030916 ~ 34046517 (-)
G1858455 NA non-coding upstream 147634 34648788 ~ 34649348 (-)
G1858456 NA non-coding upstream 148505 34649659 ~ 34650113 (-)
G1858569 NA non-coding upstream 310162 34811316 ~ 34811591 (-)
G1858520 NA non-coding upstream 313658 34814812 ~ 34815387 (-)
G1858577 NA non-coding upstream 342791 34843945 ~ 34844171 (-)
LOC110502621 LOC106608559 other downstream 896966 33590457 ~ 33601995 (-)
G1856217 NA other downstream 1852667 32637425 ~ 32646140 (-)
G1855822 LOC106608363 other downstream 1982526 32515749 ~ 32516281 (-)
G1855821 NA other downstream 1983399 32515066 ~ 32515408 (-)
G1858519 NA other upstream 319622 34820776 ~ 34821565 (-)
G1858575 LOC106613168 other upstream 338746 34839900 ~ 34841662 (-)
G1858636 NA other upstream 435535 34936689 ~ 34968861 (-)
G1859038 NA other upstream 741960 35243114 ~ 35243589 (-)
LOC110502661 golga7b other upstream 1453066 35954220 ~ 36014458 (-)

Expression


Co-expression Network