XLOC_037411


Basic Information

Item Value
gene id XLOC_037411
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 46378709 ~ 46395404 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075195
CTGTTCCATATCCCAAATTGCTCACTACCCAAGGACTGCCAAAGGTGATCCATGATTTTACTCTGTCTCCATAACGAGAGAAGCAGAAGTCTGAAAATTCTTTGAATGCTTCCACAATGGAGTCATTAGTCCAGCCTCCTGATTCCTGTAGAGCTTGGGGAAGGTCCCAATGATGCAGGGTAACAGTGGGCTCGATTCCTGATTGCAGGAGTGTATTAATCATCTTATCATAATAAGCAGCCCCCTTTTCAACAAAACTTTCTTTGCGTCCAGTGGGAAAAATGCGAGCCCAAGAGATTGAGAACTGATAATTTGGTGCCATCATGCCTCTAAGAAGATACACATCATAGTCCACCTTGTGATAACTATCACAGCCCAAAATGGATTCGTTGACCCCGGCCTCATGGTTAAAACGGTCCCATATGGTTTCACCCTTCCCGTGTTCTGCTGATCCACCTTCGACTTTGAAACTCTCACTGGAGACGGACCATTGAAAATCAACTGGGAAGGAACCACTGAGGAACTGATCCCGCTCAGCTTCAGTCTGACTTTTGAATTTCTCCCAAACCTTCTGATATGAGAATGCAGAAGCTGATTTCTGATGAATTTTAGTGTTTTCCTTCTGCAGACTAAATGAAAACAATCATTTAACTGACTTAAAAACAGTTGCACAATGATacaatatgtatgtatgtttttcaCCTCAGTCTTACCTGAGTGTTTCTTCATAATCTAGCTCCTCAAAAACATATGTGATGTCACAGCCTATAATATGATGGCCTTCGTTCTGTAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075195 True 793 lncRNA 0.42 2 46378709 46395404

Neighbor

gene id symbol gene type direction distance location
XLOC_037410 NA coding upstream 494575 45865267 ~ 45884134 (+)
XLOC_037409 twist2 coding upstream 535230 45839260 ~ 45843479 (+)
XLOC_037408 BX897692.2 coding upstream 557124 45821469 ~ 45821585 (+)
XLOC_037407 si:dkey-34f9.3 coding upstream 584515 45789887 ~ 45794194 (+)
XLOC_037406 asb1 coding upstream 681065 45680802 ~ 45697644 (+)
XLOC_037412 NA coding downstream 19754 46415158 ~ 46431296 (+)
XLOC_037413 NA coding downstream 87525 46482929 ~ 46616033 (+)
XLOC_037414 slc4a3 coding downstream 249229 46644633 ~ 46684539 (+)
XLOC_037415 igfbp2b coding downstream 349944 46745348 ~ 46799620 (+)
XLOC_037416 NA coding downstream 443242 46838646 ~ 46840389 (+)
XLOC_037404 NA non-coding upstream 825331 45548787 ~ 45553378 (+)
XLOC_037403 NA non-coding upstream 1116948 45261384 ~ 45261761 (+)
XLOC_037401 NA non-coding upstream 1255719 45112496 ~ 45122990 (+)
XLOC_037417 NA non-coding downstream 459141 46854545 ~ 47322964 (+)
XLOC_037425 NA non-coding downstream 1985451 48380855 ~ 48381572 (+)

Expression


Co-expression Network