Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110503110 |
| gene name | LOC106612973 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 36264498 ~ 36391057 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: zinc finger matrin-type protein 4-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036959902.1 | False | 681 | mRNA | 0.54 | 5 | 36310611 | 36391057 |
| TU2128042 | True | 817 | TUCP | 0.52 | 5 | 36264498 | 36389880 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sfrp5 | sfrp5 | coding | upstream | 148059 | 36123204 ~ 36166009 (+) |
| crtac1b | crtac1 | coding | upstream | 375614 | 35879332 ~ 35934997 (+) |
| loxl4 | loxl4 | coding | upstream | 495910 | 35757462 ~ 35814701 (+) |
| zgc:123010 | LOC106613015 | coding | upstream | 574919 | 35687052 ~ 35735692 (+) |
| pyroxd2 | pyroxd2 | coding | upstream | 634623 | 35633942 ~ 35675988 (+) |
| LOC110502664 | avpi1 | coding | downstream | 252063 | 36643120 ~ 36647796 (+) |
| LOC110502667 | LOC105021389 | coding | downstream | 290838 | 36681895 ~ 36692480 (+) |
| LOC110502668 | LOC106612941 | coding | downstream | 303512 | 36591861 ~ 36714947 (+) |
| LOC110502670 | slc25a28 | coding | downstream | 353920 | 36744977 ~ 36763280 (+) |
| LOC110502673 | got1 | coding | downstream | 432827 | 36823884 ~ 36850022 (+) |
| G1859673 | NA | non-coding | upstream | 21809 | 36287999 ~ 36288802 (+) |
| G1859625 | NA | non-coding | upstream | 96197 | 36214211 ~ 36214414 (+) |
| G1859612 | NA | non-coding | upstream | 111319 | 36199049 ~ 36199292 (+) |
| G1859606 | NA | non-coding | upstream | 122562 | 36187717 ~ 36188049 (+) |
| G1859604 | NA | non-coding | upstream | 125683 | 36184519 ~ 36184928 (+) |
| G1859740 | NA | non-coding | downstream | 16558 | 36407615 ~ 36408041 (+) |
| G1859741 | NA | non-coding | downstream | 17145 | 36408202 ~ 36408447 (+) |
| G1859655 | NA | non-coding | downstream | 55207 | 36446264 ~ 36446709 (+) |
| G1860460 | NA | non-coding | downstream | 56526 | 36447583 ~ 36447861 (+) |
| G1860476 | NA | non-coding | downstream | 72843 | 36463900 ~ 36464120 (+) |
| G1859436 | NA | other | upstream | 283625 | 35954168 ~ 36026986 (+) |
| G1859175 | NA | other | upstream | 893510 | 35416512 ~ 35417101 (+) |
| G1857923 | NA | other | upstream | 1492475 | 34817749 ~ 34818136 (+) |
| G1857224 | NA | other | upstream | 2533870 | 33776305 ~ 33776741 (+) |
| G1860679 | NA | other | downstream | 333015 | 36724072 ~ 36724509 (+) |
| LOC110502696 | LOC106613523 | other | downstream | 1646992 | 38038007 ~ 38067483 (+) |
| LOC110502720 | mpc1 | other | downstream | 3058346 | 39449355 ~ 39458454 (+) |
| G1863919 | NA | other | downstream | 3221947 | 39613004 ~ 39613630 (+) |
| LOC110502740 | LOC106613508 | other | downstream | 3456757 | 39847791 ~ 39850264 (+) |
| G1859601 | NA | non-coding | upstream | 84802 | 36179460 ~ 36179696 (+) |
