Item | Value |
---|---|
gene id | LOC110502664 |
gene name | avpi1 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048587.1 |
NCBI id | CM023241.2 |
chromosome length | 62880378 |
location | 36643120 ~ 36647796 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
avpi1 | Orthologous to human AVPI1 (arginine vasopressin induced 1). |
description |
---|
arginine vasopressin-induced protein 1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021580881.2 | False | 2302 | mRNA | 0.44 | 4 | 36643120 | 36647796 |
XM_021580875.2 | False | 2326 | mRNA | 0.44 | 4 | 36643208 | 36647796 |
XM_021580876.2 | False | 2630 | mRNA | 0.45 | 6 | 36643212 | 36647796 |
XM_021580879.2 | False | 2438 | mRNA | 0.44 | 5 | 36643212 | 36647796 |
XM_036960374.1 | False | 2402 | mRNA | 0.45 | 5 | 36643212 | 36647796 |
XM_021580878.2 | False | 2507 | mRNA | 0.45 | 5 | 36643219 | 36647796 |
XM_021580877.2 | True | 2603 | mRNA | 0.45 | 7 | 36643282 | 36647796 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110503110 | LOC106612973 | coding | upstream | 252063 | 36264498 ~ 36391057 (+) |
sfrp5 | sfrp5 | coding | upstream | 480568 | 36123204 ~ 36166009 (+) |
crtac1b | crtac1 | coding | upstream | 708123 | 35879332 ~ 35934997 (+) |
loxl4 | loxl4 | coding | upstream | 828419 | 35757462 ~ 35814701 (+) |
zgc:123010 | LOC106613015 | coding | upstream | 907428 | 35687052 ~ 35735692 (+) |
LOC110502667 | LOC105021389 | coding | downstream | 34099 | 36681895 ~ 36692480 (+) |
LOC110502668 | LOC106612941 | coding | downstream | 46773 | 36591861 ~ 36714947 (+) |
LOC110502670 | slc25a28 | coding | downstream | 97181 | 36744977 ~ 36763280 (+) |
LOC110502673 | got1 | coding | downstream | 176088 | 36823884 ~ 36850022 (+) |
hpse2 | hpse2 | coding | downstream | 240636 | 36888432 ~ 37002537 (+) |
G1860576 | NA | non-coding | upstream | 96818 | 36546047 ~ 36546302 (+) |
G1860478 | NA | non-coding | upstream | 177598 | 36465211 ~ 36465522 (+) |
G1860476 | NA | non-coding | upstream | 179000 | 36463900 ~ 36464120 (+) |
G1860460 | NA | non-coding | upstream | 195259 | 36447583 ~ 36447861 (+) |
G1859655 | NA | non-coding | upstream | 196411 | 36446264 ~ 36446709 (+) |
G1860621 | NA | non-coding | downstream | 93300 | 36741096 ~ 36743829 (+) |
G1860687 | NA | non-coding | downstream | 118304 | 36766100 ~ 36767774 (+) |
G1860694 | NA | non-coding | downstream | 128879 | 36776675 ~ 36776937 (+) |
G1860702 | NA | non-coding | downstream | 142776 | 36790572 ~ 36790809 (+) |
G1860703 | NA | non-coding | downstream | 143959 | 36791755 ~ 36792072 (+) |
G1859436 | NA | other | upstream | 616134 | 35954168 ~ 36026986 (+) |
G1859175 | NA | other | upstream | 1226019 | 35416512 ~ 35417101 (+) |
G1857923 | NA | other | upstream | 1824984 | 34817749 ~ 34818136 (+) |
G1860679 | NA | other | downstream | 76276 | 36724072 ~ 36724509 (+) |
LOC110502696 | LOC106613523 | other | downstream | 1390253 | 38038007 ~ 38067483 (+) |
LOC110502720 | mpc1 | other | downstream | 2801607 | 39449355 ~ 39458454 (+) |
G1863919 | NA | other | downstream | 2965208 | 39613004 ~ 39613630 (+) |
LOC110502740 | LOC106613508 | other | downstream | 3200018 | 39847791 ~ 39850264 (+) |