si:dkey-103j14.5 (LOC106612836)


Basic Information

Item Value
gene id si:dkey-103j14.5
gene name LOC106612836
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 37339267 ~ 37354024 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021581453.2
ATGAAGCCAGTAATAGTTGTGCATGGCGGTGCATGGGCCATCCCGGATGATATGGCTAAGGCATCAGTGAATGGGGTGAAGTCAACAGCTACTGCAGGCTTTCTGGCTATGAAGAGAGGAGGCAGTGCATTGGATGCTGTTGAGCTAGCTGTTAGGGCCTTAGAAGATAACCCAACCTTTGATGCAGGTCATGGAGCAGTACTGAATACTAATGGAGAAGTGGAGCTGGACTCCATCATTATGGATGGAAGGACTCTAGCTGCTGGAGCTGTGTCTTCGGTGAAGAACATCGCCAACCCTGTGTCACTGGCCCGTGCTGTGATGGAAAAGACCGACCACATCATGTTGACAGACAGAGGTGCAAACATGTTTGCTGAAAGCGTTGGCATACCTGCAGTCCCTACAAACGCCCTGGTGACAGAATGTGAGAGAACGGAGAGGGAGAAAGCCAAGTATTATGCTGTTGAAGTGAAGGATCTCTTCAACTCTCAATGGGGCCACGATACTGTTGGAGCTGTTGCTGTAGACTGTTCTGGTAATGTTGCATGTGCAACTTCCACTGGAGGAATAAGAAACAAAATGGTGGGCAGAGTAGGAGATCATAGGTAATAGGTAAGTAGCTGTTTAGGGTCTGGTGGGTATGCAGACAACCTGAGTGGTGCAGTATCCTGTACTTGCCATGGAGAGTCCATCCTGAAAGTCACCCTAGccagactctaactaaccctaacccacctagAGCAAGGTAAACGTGCTCCTGAGGCTGTAGAGGTCTCTTTGCGTTACATGGGTGATCGGGTACAGGGAGGAGGAGCTATATTAGTTTCCCGGACAGGGGAGTGGGCAGCCAAGTTCACCACAGAGCGAATGGCCTgggcagcagtggagagagaggttcTGTGGTATGGTTTGAACCCAAAAGAAGAGTTCAAAGAGACACTAAGACAATAACAGCTTATTCTGTATTTTGTTGGGGGAGGGGGGATACATAGATTTTAAAAAGTGTTATTGCGGAACACAGTGCCAGATTGACATATGGAGCCTACTCACTGGAATTTTGTTGGCAAGAGAATTTAAAGGACCAGAGAAATCcatatgtgtttgtgttttcaaAATGTTGTGGCATTTTATCACAGAATATATTTGATAAAAGCTTGGTCAGTTTGAGAGTTTTAAAATGGTTTAATTTTCTATGTAAATGTCATGATTTATAAATGTTTAATGGATTATGGATGTTTTTGTAATAATTAAAACCTGAGGAAAAAAAAAATTTAAT

Function

NR:

description
PREDICTED: isoaspartyl peptidase/L-asparaginase-like isoform X2

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K13051 ASRGL1, iaaA; L-asparaginase / beta-aspartyl-peptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021581453.2 True 1276 mRNA 0.45 7 37339267 37354024

Neighbor

gene id symbol gene type direction distance location
LOC110502679 LOC106612855 coding downstream 11592 37302808 ~ 37327675 (-)
LOC110502678 LOC106612863 coding downstream 40792 37292026 ~ 37298475 (-)
slit1a slit1 coding downstream 49782 37125711 ~ 37289485 (-)
LOC110502674 cnnm1 coding downstream 456179 36850124 ~ 36883088 (-)
LOC110502672 nkx2-3 coding downstream 531856 36803387 ~ 36807411 (-)
prim2 prim2 coding upstream 188561 37542585 ~ 37649964 (-)
LOC110502685 LOC106612807 coding upstream 308041 37662065 ~ 37666312 (-)
LOC110502689 LOC106612792 coding upstream 328649 37682673 ~ 37692196 (-)
LOC110502698 LOC106612663 coding upstream 728096 38082120 ~ 38100592 (-)
LOC110502699 LOC106612641 coding upstream 823457 38177481 ~ 38187671 (-)
G1861373 NA non-coding downstream 715 37338280 ~ 37338552 (-)
G1861371 NA non-coding downstream 1352 37337515 ~ 37337915 (-)
G1861339 NA non-coding downstream 21993 37273204 ~ 37317274 (-)
G1861357 NA non-coding downstream 28520 37310025 ~ 37310747 (-)
G1861320 NA non-coding downstream 112958 37225661 ~ 37226309 (-)
G1861524 NA non-coding upstream 38242 37392266 ~ 37393141 (-)
G1861530 NA non-coding upstream 46662 37400686 ~ 37422365 (-)
G1861532 NA non-coding upstream 50352 37404376 ~ 37406279 (-)
G1861588 NA non-coding upstream 142026 37496050 ~ 37496427 (-)
G1861368 NA other downstream 3853 37335027 ~ 37335414 (-)
G1860462 NA other downstream 887808 36448831 ~ 36451459 (-)
LOC110502661 golga7b other downstream 1380062 35954220 ~ 36014458 (-)
G1859038 NA other downstream 2095678 35243114 ~ 35243589 (-)
G1858636 NA other downstream 2370406 34936689 ~ 34968861 (-)
G1862272 NA other upstream 802725 38156749 ~ 38157209 (-)
G1864033 NA other upstream 2095373 39449397 ~ 39453415 (-)
srsf2a LOC106612293 other upstream 2825805 40179809 ~ 40185223 (-)
G1868010 NA other upstream 5561382 42915406 ~ 42978144 (-)
G1868940 LOC106611807 other upstream 6132844 43486868 ~ 43501433 (-)

Expression


Co-expression Network