sfxn2 (sfxn2)


Basic Information

Item Value
gene id sfxn2
gene name sfxn2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 40096096 ~ 40102224 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021581009.2
TCGGAAAGGGAGCTGCCCCAGGCTGTGATTGGAGGAAGCGGTGCCACGTGCACCCTCCCCTTACTACACCAACTGCTGAGATCTTGACTTGAAACATTTAGCAAGTGACATTGTGTCATCTTGCAGTACAGCGCTGAAAGGTGAGGTGGTTTGGAGACCATATTTGTGACTTTAGACCTAGGTTGTGAGGCGGAGGGTCACGATGGCAGTGAGCGGGTTTGACATTGACGTGCCACGGTGGGATCAGTCCACGTTTATGGGAAGATTGAAGCACTTTGCCAACATCACAGACTGGAGGACAGCACTACTGCCGGACTCACGACTGGATGAGGCTAAAGCACTGGTGGAGAGCTGCAGAGCGGGGTCCGTTCCCCCCGGCACCACAGAGGAACAGCTGCACTACGCCAAGAAGCTCTATGACTCTGCCTTTCACCCTGACACTGGCGATCGCATGAACCTGATTGGTCGGATGTCCTTCCAGGTGCCCGGAGGGATGGCCATAACGGGCGGTATGCTTCAgttctacaggacaGTCCCTGCTGTAGTGTTCTGGCAGTGGGTGAATCAGTCGTTTAATGCTCTGGTCAACTACACCAACAGAAATGCTGCTTCCCCCATCACACCCAATCAAATCGGAGTAGCCTATTTAACAGCAACTAGCACTGCTCTAGCCACTGCTGTGGGACTTAACTTCTACACAAAGAGGGCCCCTCCGCTGGTGGCGCGCTGGGTTCCGTTTGCAGCCGTGGCGTCCGCTAACTGTGTCAATATTCCAATGATGAGGCAACAGGAGCTTCTGAATGGCATAGCTGTAACAGATGAGAATGGAAACAAACTTGGCCATTCCAAGAAAGCAGCTGTGAAGGGCATCACCCAGGTGGTCATTTCCCGAATTACCATGGCAGCACCAGGCATGAtCATTCTCCCCGTCATCATGCAGAGACTTGAGAAATTCAAGTTTATGCAGAGGATCACCTTCTTCCACGGACCTTTACAAGTCATAATGGTGGGAGCGTTcctggtcttcatggtgcctgCAGCCTGCTCCCTGTTCCCTCAGCAATGCTCCATGGCTGTGTCTAAACTGGAGCCAGAGCTAAGAGAGTCCATCTTGTGTCATTACGGGGACAGTGTACAATACGTCTACTTCAACAAGGGCCTATGAAcacacgcacacctgccttcttAATCGTTGTCCAATCAGGGAGAGCATCTGAAAGTTTTTATAGATGAGCCAATCAGCATCTTCGGTTCATAGGATAAATAGCTTTCTCCTTGTTTGTCTTTATTTTCAAAGAATCTTTGTAATTCTAAGGGAGATGTTCAAATGTGTTTGAATTCTCTTTTTGTACCACAAACcacctttttatgcgagtaaagtacatgttggataaaaaaaaatgtcacgaggcctgatggaaacagcagatttgtCTGTAAACTTTCGaaatgttgacaaaacaaaatacacttGACAaagtggga
>XM_021581008.2
GAGGCATAAATAGCAACACTGTGTATTTATCTATATTGTCTATTTATCATTGTGAGGTCGCTTTAGCCATAATTATGTATTTTGCCGTTGCTTTAGAAATACAAAGGTAAAGATTTACTGCATACAGAGTTTAAAAGATGAGATGACTGAAAGTACATATgagtatatattttatttgattaaaaagtatttatttatGGAGGCCGAAGTTCGGAAAGGGAGCTGCCCCAGGCTGTGATTGGAGGAAGCGGTGCCACGTGCACCCTCCCCTTACTACACCAACTGCTGAGATCTTGACTTGAAACATTTAGCAAGTGACATTGTGTCATCTTGCAGTACAGCGCTGAAAGAGTCAGACTGGAAGAGCTGAGTGGACCAGGTTGGTACAGGACCAAGAAGCCAAACATTGACTGCAGGCTCGACTCTGTTTTGGACAGGTGAGGTGGTTTGGAGACCATATTTGTGACTTTAGACCTAGGTTGTGAGGCGGAGGGTCACGATGGCAGTGAGCGGGTTTGACATTGACGTGCCACGGTGGGATCAGTCCACGTTTATGGGAAGATTGAAGCACTTTGCCAACATCACAGACTGGAGGACAGCACTACTGCCGGACTCACGACTGGATGAGGCTAAAGCACTGGTGGAGAGCTGCAGAGCGGGGTCCGTTCCCCCCGGCACCACAGAGGAACAGCTGCACTACGCCAAGAAGCTCTATGACTCTGCCTTTCACCCTGACACTGGCGATCGCATGAACCTGATTGGTCGGATGTCCTTCCAGGTGCCCGGAGGGATGGCCATAACGGGCGGTATGCTTCAgttctacaggacaGTCCCTGCTGTAGTGTTCTGGCAGTGGGTGAATCAGTCGTTTAATGCTCTGGTCAACTACACCAACAGAAATGCTGCTTCCCCCATCACACCCAATCAAATCGGAGTAGCCTATTTAACAGCAACTAGCACTGCTCTAGCCACTGCTGTGGGACTTAACTTCTACACAAAGAGGGCCCCTCCGCTGGTGGCGCGCTGGGTTCCGTTTGCAGCCGTGGCGTCCGCTAACTGTGTCAATATTCCAATGATGAGGCAACAGGAGCTTCTGAATGGCATAGCTGTAACAGATGAGAATGGAAACAAACTTGGCCATTCCAAGAAAGCAGCTGTGAAGGGCATCACCCAGGTGGTCATTTCCCGAATTACCATGGCAGCACCAGGCATGAtCATTCTCCCCGTCATCATGCAGAGACTTGAGAAATTCAAGTTTATGCAGAGGATCACCTTCTTCCACGGACCTTTACAAGTCATAATGGTGGGAGCGTTcctggtcttcatggtgcctgCAGCCTGCTCCCTGTTCCCTCAGCAATGCTCCATGGCTGTGTCTAAACTGGAGCCAGAGCTAAGAGAGTCCATCTTGTGTCATTACGGGGACAGTGTACAATACGTCTACTTCAACAAGGGCCTATGAAcacacgcacacctgccttcttAATCGTTGTCCAATCAGGGAGAGCATCTGAAAGTTTTTATAGATGAGCCAATCAGCATCTTCGGTTCATAGGATAAATAGCTTTCTCCTTGTTTGTCTTTATTTTCAAAGAATCTTTGTAATTCTAAGGGAGATGTTCAAATGTGTTTGAATTCTCTTTTTGTACCACAAACcacctttttatgcgagtaaagtacatgttggataaaaaaaaatgtcacgaggcctgatggaaacagcagatttgtCTGTAAACTTTCGaaatgttgacaaaacaaaatacacttGACAaagtggga

Function

symbol description
sfxn2 Predicted to enable serine transmembrane transporter activity. Predicted to be involved in serine import into mitochondrion. Predicted to act upstream of or within amino acid transport; ion transport; and transmembrane transport. Predicted to be located in membrane and mitochondrion. Predicted to be integral component of membrane. Predicted to be integral component of mitochondrial inner membrane. Orthologous to human SFXN2 (sideroflexin 2).

NR:

description
sideroflexin-2 isoform X1

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0006812 cation transport biological_process
GO:0016020 membrane cellular_component
GO:0008324 cation transmembrane transporter activity molecular_function

KEGG:

id description
K23501 SFXN2; sideroflexin-2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021581009.2 False 1485 mRNA 0.49 12 40096096 40102014
XM_021581008.2 True 1782 mRNA 0.47 12 40096096 40102224

Neighbor

gene id symbol gene type direction distance location
LOC110502744 LOC106612365 coding downstream 23588 40008383 ~ 40072508 (-)
LOC110502743 LOC106612385 coding downstream 137999 39947484 ~ 39958097 (-)
dna2 dna2 coding downstream 284311 39777382 ~ 39811785 (-)
hnrnph3 hnrh3 coding downstream 323496 39766791 ~ 39772600 (-)
tacr2 LOC106612452 coding downstream 430070 39660915 ~ 39666026 (-)
trim8b trim8 coding upstream 33598 40135822 ~ 40143175 (-)
LOC110502750 LOC106612307 coding upstream 52781 40155005 ~ 40177932 (-)
srsf2a LOC106612293 coding upstream 77585 40179809 ~ 40185223 (-)
nat9 nat9 coding upstream 149007 40251231 ~ 40254320 (-)
eme1 eme1 coding upstream 168194 40270418 ~ 40290299 (-)
G1865216 NA non-coding downstream 31182 40064703 ~ 40064914 (-)
G1865214 NA non-coding downstream 34640 40060970 ~ 40061456 (-)
G1865210 NA non-coding downstream 40676 40055191 ~ 40055420 (-)
G1865206 NA non-coding downstream 47052 40048272 ~ 40049044 (-)
G1865202 NA non-coding downstream 53054 40042803 ~ 40043042 (-)
G1865244 NA non-coding upstream 22976 40125200 ~ 40173253 (-)
G1865291 LOC106612253 non-coding upstream 102891 40205115 ~ 40207803 (-)
G1865314 NA non-coding upstream 129680 40231904 ~ 40232971 (-)
G1865312 NA non-coding upstream 130850 40233074 ~ 40234410 (-)
G1865323 NA non-coding upstream 154391 40256615 ~ 40256927 (-)
G1864033 NA other downstream 642681 39449397 ~ 39453415 (-)
G1862272 NA other downstream 1938887 38156749 ~ 38157209 (-)
G1861368 NA other downstream 2760682 37335027 ~ 37335414 (-)
G1860462 NA other downstream 3644637 36448831 ~ 36451459 (-)
LOC110502661 golga7b other downstream 4136891 35954220 ~ 36014458 (-)
G1868010 NA other upstream 2813182 42915406 ~ 42978144 (-)
G1868940 LOC106611807 other upstream 3384644 43486868 ~ 43501433 (-)
G1872165 NA other upstream 5925696 46027920 ~ 46029807 (-)
G1872556 NA other upstream 6695011 46797235 ~ 46797650 (-)

Expression


Co-expression Network