LOC110502780 (LOC106612024)



Basic Information


Item Value
gene id LOC110502780
gene name LOC106612024
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 42145163 ~ 42173513 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_021581054.2
TCGCTCTTTATCTCGGTAGGTATGAAGTGTATCAGAGTGTGATTGAACACAGTCAGTTGAAGGGTAGGAAGCTACAGGACAGAGTCTGTCAGTCAGTAGTGGTGGTGCTCAGAGTAGTTTTGCTTGGACTCTGGTGTGACTACAAAGTGTTTTGGacattttgtgggttattgtgggACATATCACCATTGACTGTGATCCCGAGGTGACCGTGAAGCACAAGACATGCTGCTAAGACTAAGTCTCCTCAGCCTACtggccctctctccatctctggctGCCCCACACCAAGGCTCCTTCCCTGGAGTGGATTCTCCCCACAGGAGCTCCAGAAACAACAAGCTGCTGCTCATCTCATTCGATGGGTTCCGTTGGGACTATGACAGGGACGTGGACACCCCTCACTTGGACGCGATGGGCCGGGACGGCGTCAGGGCTGCCTACGTCACACCCCCCTACCTCACCATCACCAGCCCCACACACTTCACCCTGCTCACAGGTCGGTACATAGAAAACCATGGAGTGATCCACAATATTTGGTTCAACACTACGACCCAGGAGAAGAAACAGTACTACATGACCCAGTTTGTGGATTCCTACTGGGACAACGGGAGTCTGCCCATCTGGATAACAGCGCAGAGACAAGGTCTGAAGGCAGGCTCCCTCCACTTCCCCGGCACGGCCGCCACCTACAAAGGTGAGAGAGTAAAGGTCAGCCAGGTGGAACCTCGTTTCTATGAGCACAACAATGAGACGGACTGGAGGATCAATATCGACAAGGTGATTGGTCAGTGGTTCTCCAAGGAGGACCTAGACTTTGTGTCTTTGTACTTCGGTGAACCAGATGGAACGGGACACAAGTATGGACCAGAATCCCCGGAGCGCCAGGAGATGGTCCAACAAGTGGACCGGACCGTGGGATACATCCGCGATACCACCCGGAATCACGGCCTCTCTGATCGGCTCAACATCATTATCACTGCTGATCATGGAATGACCACTGTGCTCCGGAATGGCCTGGTCGACGAGATCATCCTGTCCGAGATTCCGGGATTTGACTTCCGGGATATCAAGTTCCAACTGGTGGATTATGGACCAACAGGAATGCTTCTTCCCAGAGAGGGAATGCTGGAGAAGGTGTACCAGGCCCTGAAAGGGGGCCACCCTCACCTGCATGTGTATAAGAAGGAGGACATGCCTGGTAGGCTTCACTATAGTAACCACCCTCGCCTCCTGCCCCTGATTCTCTTCGCTGATCAAGGATATGTCATCAATGGCTTTTTCCCAGTCCAGTTCAACAAGGGAGAGCATGGCTATGATAACCAGATGATGGACATGAAGCCGTTCTTCAGAGCTGCGGGGCCTGACTTCCAGAAGAACCTGGCTGTGGGACCCTTTGAGACGGTCAACGTGTATCCGCTGATGTGCCACCTCCTGGGCATTAAACCGGAGGTCAACGATGGGTCGCTGGAGGTCACTCGCCAGATGCTGGTTCCCAAGAAGGACCAGGGATCCTATGAGAACAGGGACATCCAGTGGGAAGTCTTCATCGGCCTGACATCGGTCGCTGGTATGTTAGCTCTGGTGTTTGTTGTCACCACAGCTCATGCCATGTTGAAAAGGACTCAGGAAAAGGACAGGAGATCTGAAGTCACCCACGAGGATCTCAATGAAAAAGAGTCCGATAAACAAACCTCCTTTTGAAAACCATTACCTTTGTGGGAAGTCATTTGTTTAACAAGTTATTGGGCTTCTGTGTGATTTGAGTGCTAATATCCTAGTTTAACCAaacaaaatgttgtttttatACCAATGCAATATACATCTGTATCAGTGTATCAGGAAGGCCAACACCCTAACTCTAATCCTAGCTCTAACCctggcttcatgtccacacccggTTCAACCCTACAATATGTTTCAAAACCAATAACAAGCTTATTGATTATGCTGCActcgttatgtctaggggtctaaggcctacatggtctgtaacctgatttTTATGTGTGCATAAATGTGAGAGGTATGTGTATACGACCAGGTGTCGGATGCATGTACCCAGAAGATAGCAACCTTAACTTGGAGCTATACAGTAGAGCTATGCAAACACCACAATCGAGTTCCTTTGAACACTGAGTTAAATGGGGAACACTGCAGCATATTTAAATATTTAACACTTTCAAAAGTGTTATTTTAACACCAGTACAGTGGACTCATCTGTTCACTGAAAATAGTATGTTTTTACACTTTCAGAGTTAAAGGTATACCCTTGGTTGTACTGTGCAGCTGCCCAATCAGATTATTGTTATTTCTAAATGGTGAccaaaatacatacagtattgtATATACAAAAATATTCCAAAGGCCACATTGCCACCAAGAAAAAAGCCTATAGCCTCCCAAGTCTACAAGCTTACACACTAATCTCCCCTACAAAGGCAAAATGCAGTAACTACCCTTTTGGTCAAAATGAATTTAAGACTGAAATCAGGCTCTGTAGCATCTGTATTTTATTCTTATGACAATGTGTCCTGGTTCAATTTTGTTCAGTCAGAAAAAAATGGAATGTGAAATTTGCAGTAACTACAAAATACAAGTAGAAACCAAGGCAAACAGCAGTAACTGAAGTTACTCCACTTTGGCTTAGTTCCAGCATGTTTTGACTGCAGTAacaacactaccgttcaaaagtttggggtcactaagaaatgtccttgtttttgaaagaaaagcaattttttgtccattaaaataacatcaaattgatcagaa

Function


NR:

description
ectonucleotide pyrophosphatase/phosphodiesterase family member 7-like

GO: NA

KEGG:

id description
K12354 ENPP7; ectonucleotide pyrophosphatase/phosphodiesterase family member 7

RNA


RNA id representative length rna type GC content exon number start site end site
XM_021581054.2 True 2775 mRNA 0.47 6 42145163 42173513

Neighbor


gene id symbol gene type direction distance location
c1qtnf1 LOC106612072 coding upstream 908483 41197062 ~ 41236680 (+)
nog3 nog coding upstream 1152215 40971413 ~ 40992948 (+)
ankfn1 ankfn1 coding upstream 1187142 40732041 ~ 40958249 (+)
hlfb hlf coding upstream 1443142 40688299 ~ 40702021 (+)
stxbp4 LOC106612143 coding upstream 1545392 40591850 ~ 40600563 (+)
chmp6b chmp6 coding downstream 4737 42178250 ~ 42190441 (+)
LOC110502783 baiap2 coding downstream 23662 42197175 ~ 42354506 (+)
LOC110502794 LOC106611895 coding downstream 648692 42772295 ~ 42844762 (+)
map2k6 mkk6b coding downstream 680562 42854075 ~ 42910334 (+)
LOC110503115 LOC106611508 coding downstream 1032182 43205695 ~ 43210846 (+)
G1866433 NA non-coding upstream 55915 42086853 ~ 42089248 (+)
G1866284 NA non-coding upstream 281772 41862759 ~ 41863391 (+)
G1866230 NA non-coding upstream 303313 41783367 ~ 41841850 (+)
G1866224 NA non-coding upstream 370130 41772570 ~ 41775033 (+)
G1866178 NA non-coding upstream 374410 41698707 ~ 41770753 (+)
G1866490 NA non-coding downstream 83348 42256861 ~ 42347338 (+)
G1866585 NA non-coding downstream 176125 42349638 ~ 42350816 (+)
G1866627 LOC106600457 non-coding downstream 257120 42430633 ~ 42435915 (+)
G1866646 NA non-coding downstream 285722 42459235 ~ 42500881 (+)
G1866599 NA non-coding downstream 301800 42475313 ~ 42478668 (+)
G1866425 NA other upstream 9335 42073834 ~ 42135828 (+)
G1865803 NA other upstream 1085159 41053314 ~ 41060004 (+)
G1864727 LOC106612143 other upstream 1564279 40571892 ~ 40580884 (+)
G1864605 NA other upstream 1768951 40371133 ~ 40376212 (+)
G1866620 NA other downstream 240384 42413897 ~ 42420065 (+)
G1866693 NA other downstream 363542 42537055 ~ 42538976 (+)
G1866661 NA other downstream 447213 42620726 ~ 42623230 (+)
G1866786 NA other downstream 541871 42715384 ~ 42715860 (+)
G1869914 NA other downstream 2483449 44656962 ~ 44673444 (+)

Expression


LOC110502780(LOC106612024) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 150.
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LOC110502780(LOC106612024) Expression in each Bioproject

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LOC110502780(LOC106612024) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 5000.
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Co-expression Network