Item | Value |
---|---|
gene id | cep131 |
gene name | cep131 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048587.1 |
NCBI id | CM023241.2 |
chromosome length | 62880378 |
location | 42495792 ~ 42545248 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
cep131 | Involved in several processes, including Kupffer's vesicle development; intraciliary retrograde transport; and melanosome transport. Acts upstream of or within cilium assembly and epithelial cilium movement involved in determination of left/right asymmetry. Predicted to be located in several cellular components, including acrosomal vesicle; chromosome, centromeric region; and cytoskeleton. Predicted to be active in centriolar satellite. Used to study Bardet-Biedl syndrome. Orthologous to human CEP131 (centrosomal protein 131). |
description |
---|
centrosomal protein of 131 kDa isoform X2 |
id | description |
---|---|
K16540 | AZI1, CEP131; 5-azacytidine-induced protein 1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021581058.2 | False | 7558 | mRNA | 0.50 | 27 | 42495792 | 42545248 |
XM_021581059.2 | True | 7528 | mRNA | 0.50 | 26 | 42495792 | 42545248 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110502786 | LOC106611954 | coding | downstream | 127 | 42477414 ~ 42495665 (-) |
LOC110502784 | aatk | coding | downstream | 42837 | 42358361 ~ 42452955 (-) |
LOC110502777 | rbfox3 | coding | downstream | 450349 | 41305863 ~ 42045443 (-) |
abca5 | LOC106612075 | coding | downstream | 1315425 | 41061719 ~ 41180367 (-) |
lipe1 | lipe1 | coding | downstream | 1448103 | 41033643 ~ 41047689 (-) |
rnf213b | rnf213 | coding | upstream | 239 | 42545487 ~ 42618909 (-) |
LOC110502791 | nploc4 | coding | upstream | 75424 | 42620672 ~ 42651866 (-) |
pde6gb | cnrg | coding | upstream | 109256 | 42654504 ~ 42659436 (-) |
gprc5c | LOC106611907 | coding | upstream | 186580 | 42731828 ~ 42750071 (-) |
gpr142 | LOC106611900 | coding | upstream | 227644 | 42772892 ~ 42790188 (-) |
G1867704 | NA | non-coding | downstream | 75649 | 42414220 ~ 42420143 (-) |
G1867537 | NA | non-coding | downstream | 327472 | 42147242 ~ 42168320 (-) |
G1867465 | NA | non-coding | downstream | 418257 | 42021076 ~ 42077535 (-) |
G1867458 | NA | non-coding | downstream | 485671 | 42006282 ~ 42010121 (-) |
G1867429 | NA | non-coding | downstream | 491824 | 41958469 ~ 42003968 (-) |
G1867743 | NA | non-coding | upstream | 27353 | 42572601 ~ 42574811 (-) |
G1867814 | NA | non-coding | upstream | 170884 | 42716132 ~ 42716470 (-) |
G1867777 | NA | non-coding | upstream | 171935 | 42717183 ~ 42720560 (-) |
srsf2a | LOC106612293 | other | downstream | 2310580 | 40179809 ~ 40185223 (-) |
G1864033 | NA | other | downstream | 3042377 | 39449397 ~ 39453415 (-) |
G1862272 | NA | other | downstream | 4338583 | 38156749 ~ 38157209 (-) |
G1861368 | NA | other | downstream | 5160378 | 37335027 ~ 37335414 (-) |
G1860462 | NA | other | downstream | 6044333 | 36448831 ~ 36451459 (-) |
G1868010 | NA | other | upstream | 370158 | 42915406 ~ 42978144 (-) |
G1868940 | LOC106611807 | other | upstream | 941620 | 43486868 ~ 43501433 (-) |
G1872165 | NA | other | upstream | 3482672 | 46027920 ~ 46029807 (-) |
G1872556 | NA | other | upstream | 4251987 | 46797235 ~ 46797650 (-) |
G1873030 | NA | other | upstream | 4396038 | 46941286 ~ 46942457 (-) |