dusp29 (LOC106611804)


Basic Information

Item Value
gene id dusp29
gene name LOC106611804
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 43873977 ~ 43875881 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021581106.2
AGTTATACAATCTGTGCCCCCGACCGACGACTCTCGTCAGGCTCCCAGAATTAAACTTCGAGCATTGGGTTCTATTTGTTTCCTCCAACTGTtgacaacaggaaacacacaaAAGGCTACACTTGTTGACTTTTAGAGAGAGTACAGTAAAGGACTTCAATTAAATCTCTTGgGAATGGATCCTGTGTGAAAGCAAGAAGCTATTGTGATAAACATGGCGTCTCACAGCTCCAAGAGGTGTGCGACTGTGAAGAAAAAGTTTGTTCCTAAGACGAAGCCACCTGAACCTGTGGTGGAATACGTTACACCTGGGGGCTATGAGCTGGAGAAGATCCTTAACCGTGACTGCATGGAGTACACTCACATCAACCAGGTCTGGCCCAACGTCTGGATTGGAGATGAAGAGAGTGCCAAAGACAAATACCACCTGAAGAAATTGGGCATGACCCACATCCTGAATGCAGCAGAGGGGACGTGGAATAATGTGGACACGGGAGCGGAGTACTACAGCGACATGGACGTGGTCTACTATGGGGTCGTGGCGGAGGATACTCCAACCTTTGACCTTAGCCAGTACTTCTTTTCTGCAGCCCAGTTCATCGACCAAACACTCAACATACCTGAAAATAAGCTGCTGGTGCACTGTGTGATGGGGAGAAGTCGGTCAGCCACCCTGTTCCTGGCCTACCTGATGATCTGTAAGAACATGACGGTGGTGGATGCCGTGGACCACGTGAAGCGACGCAGGCGTATCATCCCCAACTGGGGCTTCCTGAAACAGCTCAGGCAGCTGGACACTTACCTCTTAGAACAGAGGGACGAGGTGACGACTGACAAGGGAAAAGGAGAAAAAAAGGACAAGGAAAGCGAGGAGGATGAATAGAAGGATCAAATGTGATCGATGCACCCTGAGAAAAGGGAAATGTATTTAATTTCGATCATTTGGTTCCACAAGAAATGTGTACAGTGAAAAAAATTGTCAAACAAGTAGGTTTCCTAGTACTTCAAAAATACTGTACTCCAATTGTACTTCAAATTTAAAAGAGTTAAAGTGGAAATCCACAGTTCAAACAATAAAGCAATAACAAAGCAA

Function

NR:

description
dual specificity phosphatase DUPD1-like

GO: NA

KEGG:

id description
K14165 K14165; atypical dual specificity phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021581106.2 True 1093 mRNA 0.46 4 43873977 43875881

Neighbor

gene id symbol gene type direction distance location
LOC110502805 LOC106611817 coding downstream 440238 43408822 ~ 43433739 (-)
LOC110502803 LOC106611846 coding downstream 483486 43358726 ~ 43390491 (-)
LOC110502802 LOC106611860 coding downstream 517734 43313733 ~ 43356243 (-)
LOC110502801 LOC106611867 coding downstream 570859 43277974 ~ 43303118 (-)
LOC110503118 NA coding downstream 603417 43266226 ~ 43270560 (-)
LOC110502811 dusp13 coding upstream 1797 43877678 ~ 43902553 (-)
LOC110502816 LOC106611732 coding upstream 132252 44008133 ~ 44010949 (-)
LOC100301649 LOC106611671 coding upstream 424177 44300058 ~ 44508529 (-)
LOC110503120 LOC106611651 coding upstream 646097 44521978 ~ 44646297 (-)
LOC110502821 LOC106611643 coding upstream 781077 44656958 ~ 44687275 (-)
G1869194 kat6b non-coding downstream 11506 43850116 ~ 43862471 (-)
G1869111 NA non-coding downstream 75307 43735542 ~ 43798670 (-)
G1869102 NA non-coding downstream 108770 43719839 ~ 43765207 (-)
G1868926 NA non-coding downstream 346806 43465976 ~ 43527171 (-)
G1868905 NA non-coding downstream 433025 43438773 ~ 43440952 (-)
G1869236 LOC106611746 non-coding upstream 51469 43927350 ~ 43930401 (-)
G1869210 NA non-coding upstream 57742 43933623 ~ 43953290 (-)
G1869266 NA non-coding upstream 98665 43974546 ~ 43974754 (-)
G1869278 NA non-coding upstream 105805 43981686 ~ 43981891 (-)
G1869287 NA non-coding upstream 112239 43988120 ~ 43988418 (-)
G1868940 LOC106611807 other downstream 372544 43486868 ~ 43501433 (-)
G1868010 NA other downstream 895833 42915406 ~ 42978144 (-)
srsf2a LOC106612293 other downstream 3688765 40179809 ~ 40185223 (-)
G1864033 NA other downstream 4420562 39449397 ~ 39453415 (-)
G1862272 NA other downstream 5716768 38156749 ~ 38157209 (-)
G1872165 NA other upstream 2152039 46027920 ~ 46029807 (-)
G1872556 NA other upstream 2921354 46797235 ~ 46797650 (-)
G1873030 NA other upstream 3065405 46941286 ~ 46942457 (-)
G1873043 NA other upstream 3084741 46960622 ~ 46961653 (-)
LOC110502870 PHF5A other upstream 3192027 47067897 ~ 47079813 (-)

Expression


Co-expression Network