Item | Value |
---|---|
gene id | LOC110502815 |
gene name | LOC106611737 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048587.1 |
NCBI id | CM023241.2 |
chromosome length | 62880378 |
location | 43931864 ~ 43956340 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product |
id | name | namespace |
---|---|---|
GO:0034765 | regulation of ion transmembrane transport | biological_process |
GO:0044070 | regulation of anion transport | biological_process |
GO:0005741 | mitochondrial outer membrane | cellular_component |
GO:0008308 | voltage-gated anion channel activity | molecular_function |
id | description |
---|---|
K15040 | VDAC2; voltage-dependent anion channel protein 2 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036960523.1 | False | 1789 | mRNA | 0.45 | 9 | 43931864 | 43956340 |
XM_036960521.1 | False | 1921 | mRNA | 0.45 | 10 | 43931871 | 43956340 |
XM_036960522.1 | False | 1891 | mRNA | 0.45 | 10 | 43932795 | 43956340 |
XM_021581118.2 | False | 2208 | mRNA | 0.45 | 9 | 43933524 | 43956340 |
XM_021581119.2 | False | 2087 | mRNA | 0.45 | 10 | 43933524 | 43956340 |
XM_021581117.2 | True | 1970 | mRNA | 0.45 | 9 | 43933525 | 43956340 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110502814 | LOC106611746 | coding | upstream | 1452 | 43920287 ~ 43930412 (+) |
kat6b | kat6b | coding | upstream | 58890 | 43828951 ~ 43872974 (+) |
adkb | adk | coding | upstream | 108217 | 43536422 ~ 43823647 (+) |
LOC110503119 | LOC106611807 | coding | upstream | 407505 | 43446478 ~ 43524359 (+) |
LOC110502806 | NA | coding | upstream | 490900 | 43433795 ~ 43440964 (+) |
LOC110502827 | LOC106611567 | coding | downstream | 857838 | 44814178 ~ 44857295 (+) |
LOC118943831 | NA | coding | downstream | 910162 | 44866502 ~ 44890719 (+) |
flrt3 | LOC106609185 | coding | downstream | 2005898 | 45962238 ~ 45979106 (+) |
LOC110502841 | LOC106609099 | coding | downstream | 2485904 | 46442244 ~ 46448784 (+) |
LOC110502845 | LOC106609125 | coding | downstream | 2530249 | 46486589 ~ 46492379 (+) |
G1868747 | NA | non-coding | upstream | 30933 | 43898866 ~ 43900931 (+) |
G1868647 | NA | non-coding | upstream | 230294 | 43692373 ~ 43701570 (+) |
G1868417 | NA | non-coding | upstream | 599465 | 43331870 ~ 43332399 (+) |
G1868379 | exoc7 | non-coding | upstream | 670243 | 43257436 ~ 43261621 (+) |
G1868380 | NA | non-coding | upstream | 677183 | 43251311 ~ 43254681 (+) |
G1869286 | NA | non-coding | downstream | 31815 | 43988155 ~ 43988376 (+) |
G1869296 | NA | non-coding | downstream | 40178 | 43996518 ~ 43996847 (+) |
G1869309 | NA | non-coding | downstream | 47504 | 44003844 ~ 44004251 (+) |
G1869372 | NA | non-coding | downstream | 98831 | 44055171 ~ 44055400 (+) |
G1869374 | NA | non-coding | downstream | 99975 | 44056315 ~ 44056540 (+) |
G1866786 | NA | other | upstream | 1216004 | 42715384 ~ 42715860 (+) |
G1866661 | NA | other | upstream | 1308634 | 42620726 ~ 42623230 (+) |
G1866693 | NA | other | upstream | 1392888 | 42537055 ~ 42538976 (+) |
G1866620 | NA | other | upstream | 1511799 | 42413897 ~ 42420065 (+) |
G1866425 | NA | other | upstream | 1796036 | 42073834 ~ 42135828 (+) |
G1869914 | NA | other | downstream | 700622 | 44656962 ~ 44673444 (+) |
G1870437 | NA | other | downstream | 1550277 | 45506617 ~ 45508146 (+) |
G1870450 | NA | other | downstream | 1564112 | 45520452 ~ 45525025 (+) |
G1870938 | NA | other | downstream | 2245986 | 46202326 ~ 46261651 (+) |
G1871170 | NA | other | downstream | 2659795 | 46616135 ~ 46619686 (+) |