XLOC_037425


Basic Information

Item Value
gene id XLOC_037425
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 48380855 ~ 48381572 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00074937
ggataagatggcgctttattccactgtggggacccctgataaatggaggaactaagccaaaggaaagttaatgagtgtatgggtgtttcccagtacaggagTGTAAATCATgttttggataagttggtggttcattcctctgtggcgtcccctgatgaatgaagggactaagccaaaggaaagttaatgaatgtatgagtgtgtgggtgtttcccagtactggattgcggctggtagagcatccgctgtgtaaaacatatgctggattaagttggcggttcattccactgtggcaaccactgtgtgtgtgtgagtgtgtgtttgtgtgtgtgaatgcaagagtgtatgggtgattcccagaactggattgtggctggaagggcatctgctgtgtaaaacataagctggataagttggcgattcattccgctgtggggacccctgataaatagaggaactaagccaaaggaaaattaatgaatgtatgtgtgtgtgtgaatgtgagagtgtatgggtgtttcccagtactggagtataaaacatatgctgcataagttggcggttcattccgctgtggggacctctGATAAATGGAGGAagtaagctaaaggaaaatgaatgaatgtatgtgtgtgtgtgaatgtgagagtgtatgggtgattcccagtactggagtgtaaaacatatgctggataagttggcggttcattctgctgtg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00074937 True 718 lncRNA 0.45 1 48380855 48381572

Neighbor

gene id symbol gene type direction distance location
XLOC_037424 fastkd1 coding upstream 113209 48232571 ~ 48267646 (+)
XLOC_037423 ccdc173 coding upstream 149080 48219111 ~ 48231775 (+)
XLOC_037422 mettl5 coding upstream 245046 48123002 ~ 48135809 (+)
XLOC_037421 cxcr2 coding upstream 271658 48108174 ~ 48109197 (+)
XLOC_037420 cxcr1 coding upstream 289114 48085039 ~ 48091741 (+)
XLOC_037426 lrp2a coding downstream 33471 48415043 ~ 48672254 (+)
XLOC_037427 BX927361.2 coding downstream 301203 48682775 ~ 48687885 (+)
XLOC_037428 NA coding downstream 311860 48693432 ~ 48817119 (+)
XLOC_037429 spc25 coding downstream 437708 48819280 ~ 48835494 (+)
XLOC_037430 NA coding downstream 464006 48845578 ~ 48858403 (+)
XLOC_037417 NA non-coding upstream 1057891 46854545 ~ 47322964 (+)
XLOC_037416 NA non-coding upstream 1540466 46838646 ~ 46840389 (+)
XLOC_037413 NA non-coding upstream 1764822 46482929 ~ 46616033 (+)
XLOC_037412 NA non-coding upstream 1949559 46415158 ~ 46431296 (+)
XLOC_037411 NA non-coding upstream 1985451 46378709 ~ 46395404 (+)
XLOC_037431 NA non-coding downstream 488324 48869896 ~ 48877349 (+)
XLOC_037434 NA non-coding downstream 1367764 49749336 ~ 49754453 (+)

Expression


Co-expression Network