Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110502837 |
| gene name | LOC106609157 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 46334181 ~ 46363462 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| choline O-acetyltransferase-like |
| id | description |
|---|---|
| K00623 | CHAT; choline O-acetyltransferase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036960551.1 | True | 4954 | mRNA | 0.42 | 15 | 46334181 | 46363462 |
46,332,000
46,336,000
46,340,000
46,344,000
46,348,000
46,352,000
46,356,000
46,360,000
46,364,000
46,368,000
46,372,000
46,376,000
46,380,000
46,384,000
46,388,000
46,392,000
NC_048587.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502836 | LOC106609168 | coding | downstream | 138350 | 46192750 ~ 46195831 (-) |
| LOC110511512 | LOC106609168 | coding | downstream | 144537 | 46186805 ~ 46189644 (-) |
| LOC110502833 | LOC106609168 | coding | downstream | 150462 | 46177766 ~ 46183719 (-) |
| macrod2 | macrod2 | coding | downstream | 167246 | 44976328 ~ 46166935 (-) |
| LOC110502826 | mad2l1bp | coding | downstream | 1523811 | 44806316 ~ 44810370 (-) |
| LOC110502838 | LOC106609148 | coding | upstream | 766 | 46364228 ~ 46367315 (-) |
| LOC110502839 | LOC106609079 | coding | upstream | 5963 | 46369425 ~ 46425038 (-) |
| LOC110502843 | LOC106609120 | coding | upstream | 61840 | 46425302 ~ 46436748 (-) |
| LOC110502842 | LOC106609110 | coding | upstream | 73387 | 46436849 ~ 46441950 (-) |
| LOC110502849 | LOC106609135 | coding | upstream | 85363 | 46448825 ~ 46459591 (-) |
| G1872273 | NA | non-coding | downstream | 72244 | 46261662 ~ 46261937 (-) |
| G1872188 | LOC106599751 | non-coding | downstream | 139032 | 46180463 ~ 46195149 (-) |
| G1872190 | NA | non-coding | downstream | 144315 | 46183170 ~ 46189866 (-) |
| G1871577 | NA | non-coding | downstream | 232979 | 46098229 ~ 46101202 (-) |
| G1872192 | NA | non-coding | downstream | 253056 | 46080686 ~ 46081125 (-) |
| G1872360 | NA | non-coding | upstream | 100936 | 46464398 ~ 46464676 (-) |
| G1872361 | NA | non-coding | upstream | 101221 | 46464683 ~ 46464981 (-) |
| G1872362 | NA | non-coding | upstream | 101897 | 46465359 ~ 46465746 (-) |
| G1872363 | NA | non-coding | upstream | 102579 | 46466041 ~ 46466324 (-) |
| G1872365 | NA | non-coding | upstream | 104249 | 46467711 ~ 46468332 (-) |
| G1872165 | NA | other | downstream | 304374 | 46027920 ~ 46029807 (-) |
| G1868940 | LOC106611807 | other | downstream | 2832748 | 43486868 ~ 43501433 (-) |
| G1868010 | NA | other | downstream | 3356037 | 42915406 ~ 42978144 (-) |
| srsf2a | LOC106612293 | other | downstream | 6148969 | 40179809 ~ 40185223 (-) |
| G1864033 | NA | other | downstream | 6880766 | 39449397 ~ 39453415 (-) |
| G1872556 | NA | other | upstream | 433773 | 46797235 ~ 46797650 (-) |
| G1873030 | NA | other | upstream | 577824 | 46941286 ~ 46942457 (-) |
| G1873043 | NA | other | upstream | 597160 | 46960622 ~ 46961653 (-) |
| LOC110502870 | PHF5A | other | upstream | 704446 | 47067897 ~ 47079813 (-) |
| G1873183 | NA | other | upstream | 894131 | 47257593 ~ 47312395 (-) |
