XLOC_037430



Basic Information


Item Value
gene id XLOC_037430
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 48845578 ~ 48858403 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00073632
GTCTCAGAGCAACACTGCAATGTTTGGATGCTGAATGAATCAAGATTTGCCGGATTTCCTGAATGACATCCTGATTGAGAGCGTTTCCCAGAATGCTGTAAGAATAATGCAGATATAAATGCACAGCAGCCACATGAATAATGAAGCGAGGAGAATGATGCAGTGTAGTGTGGTACCGGTGGGCATCTGCCGAGGCGAACATCTCATCTGATATGAAGGACCAGGCATGATACGTGGAGCTTTGAAGAGGGAAAAACTGTCAATGAGTTTGCAGAGCAACTGCATCAAATATTAACCTGCACTGCTGATGTGGTGAAAACAACTCGACACTGAAGAACAATACTCGTCTCACTCTTTGTCCAATTCTATGGGTAAAAAGGACCTGACATGCAATACTTGTTGTTTTCGCTTGTTTATACTTCAATCAAAGCGTCATTTTTAAAGGTTTGAACTTTTAGGTTTAAGATTTTAATATATTGTTGATTTCGAAAGTAAATTGCACAaagaattttaagatatttttatgaataaaaataacatttaaaa

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00073632 True 546 lncRNA 0.38 2 48845578 48858403

Neighbor


gene id symbol gene type direction distance location
XLOC_037429 spc25 coding upstream 10084 48819280 ~ 48835494 (+)
XLOC_037428 NA coding upstream 28459 48693432 ~ 48817119 (+)
XLOC_037427 BX927361.2 coding upstream 157693 48682775 ~ 48687885 (+)
XLOC_037426 lrp2a coding upstream 173324 48415043 ~ 48672254 (+)
XLOC_037425 NA coding upstream 464006 48380855 ~ 48381572 (+)
XLOC_037431 NA coding downstream 11493 48869896 ~ 48877349 (+)
XLOC_037432 stk39 coding downstream 85068 48943471 ~ 49052004 (+)
XLOC_037433 CSRNP3 coding downstream 800711 49659114 ~ 49745424 (+)
XLOC_037434 NA coding downstream 890933 49749336 ~ 49754453 (+)
XLOC_037435 CABZ01075129.1 coding downstream 926917 49785320 ~ 49785437 (+)
XLOC_037417 NA non-coding upstream 1522614 46854545 ~ 47322964 (+)
XLOC_037416 NA non-coding upstream 2005189 46838646 ~ 46840389 (+)
XLOC_037436 NA non-coding downstream 1011049 49869452 ~ 49885824 (+)
XLOC_037437 NA non-coding downstream 1041101 49899504 ~ 49903932 (+)

Expression



Co-expression Network