XLOC_037432 (stk39)


Basic Information

Item Value
gene id XLOC_037432
gene name stk39
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 48943471 ~ 49052004 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073633
ACTGCATATTCATACCTCTACTGAATATTCACGAGCACGCCTGTGGAGACGTCATCGCGCCCGAATGAGTATGCATGAGCTCAGCCCTAGCTGTAGTAGGATTCGCGATGTGTCTCTCCGGATGTGTTCGTCGCAGGCGGTAGTGAATGTGATCCAGCAGCGGAGCGACCCTCACGGCAGACCCATGGCGGAGCACAGCGACTCCCCGGCGGCCCTCCAGTCCCCGCAACCCGCGCCCACCACCGGCTGGCCCATCGTCAAGGAGGCGTACGAGCTCCAGGAGGTGATCGGCAGTGGAGCCACAGCAGTCGTCCAGGCAGCTCTTTGTAGCCCCCGACAGGAGCGAGTGGCCATCAAGAGAATCAACCTGGAGAAATGCCAGACCAGCATGGATGAGCTGCTGAAAGAGATTCAAGCCATGAGCCAGTGTAGCCATCCAAACGTGGTCACCTACTACACTTCATTCGTTGTCAAGGATGAGCTCTGGCTGGTCATGAAGCTCCTGAGTGGAGGATCAGTGTTAGACATCATAAAGCACACGTTCAACAAAGGAGAGCATAGAAACGGCGTTCTAGATGAATCCACGATAGCAAGCATTTTGAAGGAAGTACTGGAGGGGTTAGATTATCTACACAAAAACGGGCAGATTCACAGGGACGTGAAGGCTGGTAATATTCTTCTGGGAGAAGATGGATCGGTGCAGATCGCAGATTTTGGCGTGAGTGCTTTTTTATCCACCGGTGGAGACGTCACAAGACACAAAGTGAGGAAGACGTTTGTTGGGACCCCGTGCTGGATGGCCCCAGAAGTAATGGAGCAGGTACGAGGTTATGACTTCAAAGCTGACATTTGGAGTTTTGGAATCACTGCCATTGAACTCGCAACAGGCTCTGCGCCGTACCATCGATATCCTCCTATGAAGGTTTTAATGCTCACGCTGCAGAACGATCCTCCCTCGCTGGAAACTGGGGTCGAGGACAAAGAGATGCTTAAGAAGTATGGGAAATCTTTTAGAAAACTTATATCCCTGTGCCTTCAGAAGGACCCCGCAAAGAGGCCCACTGCAGCCGAGcttttgaaatgtaaatttttcCAAAAGGCTAAGAATCGAGAGTACTTGATGGAAAAGCTGCTTACTAAAGGACCAAATATAAGCCAAAGAGCCAAAAAGGTCAGAAGGGTCCCAGGGTCGAGTGGACACCTGCACAAAACTGAAGACGGAGACTGGGAATGGAGCGACGACGAAATGGATGAAAGAAGTGAAGAGGGGAAGGCAGCTGTCAATCATGAAAGGTCACGCAGGGTCAAAGAAAACGAAAACCAGCACGGAGAAGTGAATGCGAACAGTCTCCCGCTGGAGGATCTGTCCATTCAGCACCCGCAGGTTCAGCCATTGGAGAAACCCTCGAGCGCCCATGGAGCTGTGAACATGGTGCTGAGGTTAAGGAACTCCAAAAAGGAGCTGAATGACATACGGTTTGAGTTCACTCCAGGTCAAGACACTGCTGATGGAGTTTCTCAGGAGCTCTTCTCTGCTGGTCTGGTCAATGGTCATGATGTTGTAGTGGTGGCTGCTAACCTTCAGAAGATTGTAGAAGACCCAGTTACCTACAAAGTGTTGACCTTTAAGCTGGTGAGTTTATTCAGATGCTGAGTGTCATTGAGAGGTTTttgaagggtcacgaaacaccaaaacacactttttttgagctgttgacagtcatgtaTTTGCCCGACAGTGCTAAAatactattaggacacatatattacacaaaaaaagtgaaaattggttgtttttgctttatttcgagcaaattcgttcttccggtttgagaCTAATTTTTGAAGCAGCGTCACGCCGATTAGGTATttgcatgtattccagcgtgtagactggatgtctgtaccttgGAGTACTTTGTGATGTCTCTGTGTGTGCTGCATTTATTCATGAggaagacttggttcaaaccaatcagtgcctTCAATTGTGCATgcatgcaacttcattaatatgcatgatagcttcgaagactgtttttacctgtacagtgttcagacggcagagagacgccacgttgtgttgccaaaacaagtgggagaagAAAATTTGTTTGGAGATATGAGTCGtcagtgttgtttttattatttgctgcAAGTAaggttttagttttcattttcccgctatgagaggGCAGCTGGACTCTTGTGTGGATTGCAGTGGACGCGACGCTTGACAAAAATACATGTCTGAGGaacatttttacccgagagcttttcacatctggaaatggtgaaatctggatttgcagctctccttttaaaaaaagatgcagtTCTCGTTGGTGTTGATAGTCctatctctacagatttggtaagtaagcgatcagtgtctttgtttgtttattcagaggcaaagttagtttgtatcgtcagcagtactctttcagtgtttaagtgtttgaccttagtcaaatgatttctaagttactaaaatttacagtacgttaatatcactacaatattatgtgACTAaaagatccactgtaaatgctgctcttcgagtgtaaacatgtaaaccgCAATTAAAACTATTACCGCCATATAGGACTTTCGCCTCATTTTTTGACTGGAATAACACACACTGCTTTCTGGCGCTACGTTATCTACCGAGTGCATTTATGTTACaaagaaatgcggagggttttttttctctcatttgccatgcgttatcaaacattgcattaaaaatacacgcttaaagcagttcctcgaatcaaatatcttatCATGAGGGGCATAAAttaaattcctgaatgaaagagccaaactgcagttaaagtccaccatttaataatttgtcaaataatttgattactgatgtccatgtaaacacagtcactgtctttctgccctacgtctgtgtgttgttttgtctctgtgaaaatcagtgcgTGCCCAAACAGAAACTCCTATTTTTATGCAGATTTTTATGCACCTTTTctctttccctcctccgacactcccccctaaacagagctggacacacccacctttagaggtgtgaacctatattggtctcacggttcggttcggttaccattatcatgccatcgattcggttcaattcgatatctcgtgcatcatggtgcattgacgatgctttccatatacagtgttatattttacgggggaggctataacatgctgtctgtataaacacacagacacacagcaccacactgtctctcattcaaacacattcacaaacacagacagcatcaaacaaacaaaaacacgcacgcatgcacacacacacacacacacacacacacacttaagcccttgcaacagggagagctcgcgctgagcggagcagaaaaacgaaaaaaaaaaaaacgaaaaaaataagcacttttcctacggtcccttactgagagttACTCTCAccgcgagctctgccggctaaagtaaacgcagactgcgagggcttaaacggagcgtatggtcgtaatgtcgagcggaaaaaaaagaaagacagctgtgaaacataaccagctttgtctttttgtaggaaacacactttagatatttttagggtaagaggtttttgagttattgccgtctgtaactgaatgtgtgtcaggaatatcgaaaacaaaaccaactgaagcacgcttatttctggcgccccactggatatacagcacccttagcatttgcctatggtgcctatgccacaggccggccctgagttggctgagtgttgtaaataccggcgctcacctcccttgCGACAGAGAACAtcggagataaatgacgtcagtacataataacatcgcggtgcacagaagaaacaattaattttgacatccCTACCCCCCTTCCTGACTTTTACCAAAccagaggtgtgaaaacaccctgctgaagcAGGAAATATTGTGTACTGAAGACGATAGTGAAAtgtaaactacactgtaaaaatatctgtaaattagctgttttttgtattttgtggttcatgtttttatttttccacttttatttctgcttttgaattgcattatgggaccttgatattTCTTACAACatacttttaaccttgaaatgctaaaaaagagatttttatttaacacttttaatagtttaaaataacatattatctgggttggtgttgtgtaTTATGCTTCAAAAGCCTTGTTATAAACTGCCTTGTAATAAacatgtttattcagcaataatacTCCAGTACCGATAGCAGAACCGTTAACACCAGAGTACAGAGTTTTGGTACCCATCActaattataagtagactgttaggttggggtcagtgtaagctgacatgtacttgcaaagttaaaaaaaaatagcataataCGCGGTTATTacaggtaatccataatagacacagtaaagaaaactcgcacctcaggcacgctcgtgtctggaaCCACAAGTAtcactgtaacagccgagaggagaggaaaagttacctcacaaacagtcCAATGGGTCAAATGTCTAAagtgtgtgcgagagagagaggCAGGGATGCATTTTTATAGCATTTCTCCCTcgtagtgaaatagcggctctTGTGCCGTGCCTTCTTCAGTGTCAACGAAAGACTTTCCAGTAAACTCACAAGCACTTGAATtgtgcataattatctacctttAAAGTAGTCGGAGTGTTTCATTTACTCGCCCTTGCCTCCTTTGTCATAGTATACTACTGCGACATGgcacataggagataaatgacgtcagtacataataaccg

Function

symbol description
stk39 Predicted to enable ATP binding activity; protein serine kinase activity; and protein threonine kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human STK39 (serine/threonine kinase 39).

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
ko01001 Protein kinases

ZFIN:

id description
ZDB-GENE-140106-194 Predicted to enable ATP binding activity; protein serine kinase activity; and protein threonine kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human STK39 (serine/threonine kinase 39).

Ensembl:

ensembl_id ENSDARG00000087203

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073633 True 4784 mRNA 0.44 17 48943471 49052004

Neighbor

gene id symbol gene type direction distance location
XLOC_037431 NA coding upstream 66122 48869896 ~ 48877349 (+)
XLOC_037430 NA coding upstream 85068 48845578 ~ 48858403 (+)
XLOC_037429 spc25 coding upstream 107977 48819280 ~ 48835494 (+)
XLOC_037428 NA coding upstream 126352 48693432 ~ 48817119 (+)
XLOC_037427 BX927361.2 coding upstream 255586 48682775 ~ 48687885 (+)
XLOC_037433 CSRNP3 coding downstream 607110 49659114 ~ 49745424 (+)
XLOC_037434 NA coding downstream 697332 49749336 ~ 49754453 (+)
XLOC_037435 CABZ01075129.1 coding downstream 733316 49785320 ~ 49785437 (+)
XLOC_037436 NA coding downstream 817448 49869452 ~ 49885824 (+)
XLOC_037437 NA coding downstream 847500 49899504 ~ 49903932 (+)
XLOC_037425 NA non-coding upstream 561899 48380855 ~ 48381572 (+)
XLOC_037440 CU062479.1 non-coding downstream 1036996 50089000 ~ 50090257 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G320478 NA unknown CI01000107 null 83181 ~ 102841 (-)