meiob (meiob)


Basic Information

Item Value
gene id meiob
gene name meiob
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 48537892 ~ 48544347 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021581247.2
AGGTAAAGGTTAAGTCTAGCCAAAATATTAGGGTGGATAGATTTACAGTATAAAAGTTAGAGTAAAATCTCAAACTGAGTAACTCAAAGGTGGAGAGGCATAGCCTTTACATATTTTGTTTGCCCATAGTCCATACGGATTTGCCTGCTTGTAAATCACACCTCTTTGTCTTTACATGCAAAAGACAGGTCAGTGAttaagatacagtatatttacctTGTAATAAATATGCTTTGGATAGGTCTTCATTGGCCTCCTCTATgatagtgtaatgtaatgttggGCTATTACTGACCTACTGTACTAGTGtatttactttatttttattgtcacatacacaccGGATAGATGTTTTACGGTGTCAGCCATTGTAATAAGGGGCCTGGAGCAAATCAAGGTTaagagccttgctcaagggtacatcaacatattttttacTGTCGGCTCGGTATTCGAACCAGTgcactttcggttactggcccaacgctcttacgGTTAGGCTGCCTGTCTTAACGAACAAGGGGAAATCCAAAACGAGGCTCTCTCAATGCAGATGAGACAAGAATATTAGCCTCTTAGACCATAAAGTATTATTCACCCCCCACCACCAAAACGGACACTTTAACCGTAAACAGCGCTGCAAAAACAACAAGGCTACTGTACCATTTCGAACTGCTTCTAGTCTATCGCCGCGTGCGGTGGACGGGGGAACACCCGCGAAATTCACTGAACTAACTCCTGAGGCAAACGGAACCAGCAACTTAGACCTTAGAACTGGATAAACACTTGGAAAATGGCATACAGCAGGCAAGCTAAGGACTTTGTTGCCATTTCTGATTTACATCCAAATACAACACATCCGAGAGTGGCTGGAGTCATCATTGGAAAAACTGATGTCAAAAGCTTTCCAGACAGGAAAAGTATTGGTTTTGACAGATTCACTTTCGGCTTCACAATCAAAGACTCGCCAGACTATTTCATTAATGTATCCTTGTGGGGCAACGATGGATACATCAATGGACTCTCTAACAGCTTCCGCATAGGAGACTGTGTTATTATAGAAAATCCTTTAGTTGCTACCAAAGATCCTGAGAAAGAGGATAGATTCTGCCCCTCAACTCCCAGCTTCTACAGGTTGCTGGTGAGTGAAGCTCACTCCCAGCTATCAATAAGCTCTGACATAGAGATGATGAACAGGCTGCTGCCTCTGCTCCACCTGCCTGTGAAGGACTCCCGGGACTTCTACTCTTTGGGAGACATCGTGGCCAACGGACAGAGCTTGGACAGGACCGTCATTAACATACTCGCCGCCGTTCGGTCGATCGCAGAGCCAAAGTTTTTCACCACGGCGGACGGACGCAAAGGGCAGAGGCTAGAAGTGAAGCTCTTTGATGATTCTGTCACATCTTTTCCCTTAGTATGCTGGGACAGAGAGGCCATTCAGCTAGTTCAGACTCTGATACCAAGAGAAACAGTGCTCTTTATCTCGGATGCCAGGATTGGTTTTGACAGCTTCCGGAACTGCATGACAGCAACAGTCAATTCTAAAACCATAATCACTGTCAACCCGGATACAAAGGAAGCCAGCCTTCTGTTCAGCTATGCCAAAGAGGTCTCTGAGTCTGGTGTGTTGCATGAGGATGACAGGCCTGGAGATGTGCCTGtggattCTATCAGTGATGTGTATACAGTGAGCCAGCTCAAACTCAAAGCCCAGGAGAACCCGGAGGTGTTCTGTGGAATCACCTACAGCTTCATCTCCAAACTAGATCTAGACACCTCTGTCTCCAAAGTCATCAGAAGCAGGTGTTCCAAGTGCAGGTACCAGGTGAATGAGGAGATTCAGAGCTGCTCCAACACAGCCTGCCCTGGGGGAGACCAGCCTCTGACTGTGACCACAGGGTTTGATCTTCTGGTGGATGTGACAGACCACACAGGAACCCTGCAGTCCTGCTCCCTGAACGGCACTGTCGCAGAGAAGACTCTGGGATGCAATCCCGAGGAGTTTGTGAGTTTAACAGAGGATGAGCGAACGGCGATGAAATGGAAGATTCTCTTAGAAAGATGCAAAGTATATATCAAGATCGCTCCCTCTCCCAAAAGCAGAAGTGGAATGAGAGGCAATGTCCTGCAGTGTTCCCTCGCTGATCCAGGAGAAGTGAAGCAGAACATGTCTGCCCTGCAGTAATCACGTTCACCAGTTGTGTGGTTGGGTCCAAGTGTGGCGAGTCCTTCAGTAGCTTTCTCATATTAGGTGAATAATGGTTGAGATGCACCTTTGACATGGCTTGTGGGTTCTGTAGCTAGGCCTAGATAGAATGTACACATTTTTCATATTTATTTccctttatttatttgttattgtaTATGTGCTGTAATGTACTTTATTTATGTGTATAGTGAtaaatatacatatgtatatatatttatagaataaaaatatttttgaaa

Function

symbol description
meiob Human ortholog(s) of this gene implicated in spermatogenic failure 22. Orthologous to human MEIOB (meiosis specific with OB-fold).

NR:

description
meiosis-specific with OB domain-containing protein

GO: NA

KEGG:

id description
K22420 MEIOB; meiosis-specific with OB domain-containing protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021581247.2 True 2451 mRNA 0.45 14 48537892 48544347

Neighbor

gene id symbol gene type direction distance location
LOC110502902 LOC106609735 coding downstream 3758 48531380 ~ 48534134 (-)
LOC110502901 NA coding downstream 9590 48520679 ~ 48528302 (-)
LOC110503131 LOC106609649 coding downstream 62536 48443469 ~ 48475356 (-)
LOC110502900 NA coding downstream 152210 48380366 ~ 48387106 (-)
LOC110502897 LOC106609622 coding downstream 165172 48361406 ~ 48372720 (-)
LOC110502904 LOC106609741 coding upstream 18124 48562471 ~ 48594868 (-)
LOC110503133 LOC106609742 coding upstream 93249 48637596 ~ 48641914 (-)
LOC110502905 LOC106610051 coding upstream 106829 48651176 ~ 48658045 (-)
LOC110502909 cq039 coding upstream 142192 48686539 ~ 48696327 (-)
LOC110503134 LOC106610058 coding upstream 175713 48720060 ~ 48724580 (-)
G1874343 NA non-coding downstream 30634 48502391 ~ 48507258 (-)
G1874341 NA non-coding downstream 39318 48497942 ~ 48498574 (-)
G1874338 NA non-coding downstream 46962 48490617 ~ 48490930 (-)
G1874335 NA non-coding downstream 51675 48486002 ~ 48486217 (-)
G1874323 NA non-coding downstream 79550 48457553 ~ 48458342 (-)
G1874756 NA non-coding upstream 64609 48608956 ~ 48609172 (-)
G1874758 NA non-coding upstream 71110 48615457 ~ 48616413 (-)
G1874745 NA non-coding upstream 167833 48712180 ~ 48715028 (-)
G1874805 NA non-coding upstream 175260 48719607 ~ 48719877 (-)
G1873183 NA other downstream 1277959 47257593 ~ 47312395 (-)
LOC110502870 PHF5A other downstream 1458102 47067897 ~ 47079813 (-)
G1873043 NA other downstream 1576239 46960622 ~ 46961653 (-)
G1873030 NA other downstream 1595435 46941286 ~ 46942457 (-)
LOC110502911 LOC106609787 other upstream 185265 48729606 ~ 48838648 (-)
G1875310 NA other upstream 760172 49304519 ~ 49307135 (-)
LOC110503141 LOC106610139 other upstream 1237265 49732121 ~ 49855083 (-)
G1875984 NA other upstream 1506944 50051291 ~ 50052791 (-)

Expression


Co-expression Network