LOC110502905 (LOC106610051)


Basic Information

Item Value
gene id LOC110502905
gene name LOC106610051
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 48651176 ~ 48658045 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036960675.1
GGCTTGAGAGAAAGAGTAGATCATCAACTCAAAATTAGATTAGAATAAACTCAGAcatgggagaccagatgcgctaTGCCACTAGTGCCCAGATTATTGGagtgatatatagagagaaattTCAAGTCAAGATGTTTATGATCTCCATACTGTGGTCTGATGAGAGTGAAGTAATTGTCTACAGATCATTCCTAGATTTGAAGGAGTTTCATAGACAATTGAAGAAGAGGTTTTTCCTTGAGAATCCTTTCcgcaagagagacagagtgattCCCAAATTCAGAGCTATGAGGAGAAAGATCCAGGAGAAGGGTCCTTGTTGGTTGATGCGTCGGATGAACTTACTGGAGAACTACTGCAACGACCTGCTCAGGTGTGACCCCTCCGTGACCCGCAGTTCAGAGGTCACTCTGTTTTTCATGCCCAAAGACCACGACCTGCAGGCAGACTTCACCAAGAACAGcatcatgatgctgccatcgAAGGAGGGGGTGGGGAACATGAGCGGGCAGCGTCTGAGCGTGGGCAATAGGACACACGCCTTTGTTAGCCAGTCTTACCGCTGTGTGGGGCCCTACAACACCAAGGACACTAAGAACAGGCCCTTTAAAGTGGCCTTGGATGAGAGGCTGGACGTGCTCATCAAAGACCCGGCAGGCTGGTGGCTGGTGGAGAACGAGGACAAACAGTTGGCCTGGTTCCCTGCTCCCTACCTGGAGATGTGTGAGGcagaggaggatgaagatgaaATGAATGGAATTCCCTTGGGGGGAACTCTCTACTGTGCAGTGAGGAGTTACTCCACTAACAATAATGACGAGGTGCCTGTTCCTATTGGCTCTGTGGTAGAGGTGCTGAGGAAATCAGATGACGGATGGTGGTTCATCGGGTATAATGGAAGGATGGGCTATGTTCCCTCCATGTACCTGCAGCCTTACAACAACCCACGTTCTGGCCTCCACACCCTGCAGAGGAAGCTGCACAGCTCCTCTCTCAATCAGGCAACCCACATGAACAGCTCTATTCTCAACCTGGCATCAAGTGGTGGAAGCCAATCTAGCAACCGCTACCCAGCCACCATGTATGAGGAGACAGAGCTTAAGGAGCATACCACCGAGCCCAGGGGTAATCCGTACCGGGCTCCCCATCTCCAAAAGACCCGCTCTCTGGAGCTCCTGTCTGAGACCCGTCTCGGCATGGCCGTCCCTCCatcccaaagagagagagaagacctgGAGTCAAAGCCGAATCCAGCAATCCGCAAGAGCACCATCAGCGGGGCAGAGTCTTCCATCTCTGACTTCAGCTCGTCAGGCATTGAGTCTCTGGGCCGGAGTATCAGGGCATATTCCTCCAGTGAGGAGGACCCCCTAAGCCCCCCACACAGCACCAAGTCCTCACCCGAGCCAGGGGAGAGGAATAGTGGCCGCAGCCGCCCAGATGAGAGCCTCTCCTCCAGCTCCAGGCCTGAGGCTGGGTCCTGTAAGATGCCCACCACTGCCCCCAGGGTGCCCACGCGACCCAGAGCCCATGAGATCCTGACTCGGTGTACCACCATGACCCGCAAGGCTGCCCTGGCCTCCAGGGGGGAGTTCTCCCTGCAGGACCCCATCCAGACCCACAAGAAAGGTTGGCAGCAGTGGTAGGGGAAGTGGGGGACAAGGTCATGGGGAGCCGTGGGGAGTGCTGGTTTTGGGGTTATGTTGAAACTCGTCTCTCGTGATCGACTTTACATGTAGCGCAATACTTTGAGAATGGCTCATGAGACTATGGTTAAATTAGCATAAGAACGCCTGCTGTATGCTACACTAACTATGACTCCCTCCAACAATTTTTATGTGAGTAAATGTACCTGTCAAATAAAAAACTCTTGACAGGCCTTTTATCCATAATCAGAGTTAAGATGGGAAGGAAACATATTGTACTTCTGTTCTTTATTCAGTAACTTAAAAGTTAGGTGACAAAGTACTTTTTCAGATGTGCAAAGTCTCATCCGCTTTAGATCTACCCCTTTGTAGTTCACCAATGACTGGTTTGTTTGTAGTTGACCAATGACTGGTTTGTTTGTAGTTGACCAATGACTGGTTTGTTTGTTGTAGCCTACATGTCATACTTCTATTGGTGTCTGAAGTCACTGTTATTCCATACTGGAATTTTACTGTAACTATTTACCATTACTGTCTGTATGCCTTATATGCATGTCTAACTAATATAGTGTGCATTAAACAAT
>XM_021581249.2
ATGAAAGCAAGAGGCTTGAGAGAAAGAGTAGATCATCAACTCAAAATTAGATTAGAATAAACTCAGAcatgggagaccagatgcgctaTGCCACTAGTGCCCAGATTATTGGagtgatatatagagagaaattTCAAGTCAAGATGTTTATGATCTCCATACTGTGGTCTGATGAGAGTGAAGTAATTGTCTACAGATCATTCCTAGATTTGAAGGAGTTTCATAGACAATTGAAGAAGAGGTTTTTCCTTGAGAATCCTTTCcgcaagagagacagagtgattCCCAAATTCAGAGCCACAGCTATGAGGAGAAAGATCCAGGAGAAGGGTCCTTGTTGGTTGATGCGTCGGATGAACTTACTGGAGAACTACTGCAACGACCTGCTCAGGTGTGACCCCTCCGTGACCCGCAGTTCAGAGGTCACTCTGTTTTTCATGCCCAAAGACCACGACCTGCAGGCAGACTTCACCAAGAACAGcatcatgatgctgccatcgAAGGAGGGGGTGGGGAACATGAGCGGGCAGCGTCTGAGCGTGGGCAATAGGACACACGCCTTTGTTAGCCAGTCTTACCGCTGTGTGGGGCCCTACAACACCAAGGACACTAAGAACAGGCCCTTTAAAGTGGCCTTGGATGAGAGGCTGGACGTGCTCATCAAAGACCCGGCAGGCTGGTGGCTGGTGGAGAACGAGGACAAACAGTTGGCCTGGTTCCCTGCTCCCTACCTGGAGATGTGTGAGGcagaggaggatgaagatgaaATGAATGGAATTCCCTTGGGGGGAACTCTCTACTGTGCAGTGAGGAGTTACTCCACTAACAATAATGACGAGGTGCCTGTTCCTATTGGCTCTGTGGTAGAGGTGCTGAGGAAATCAGATGACGGATGGTGGTTCATCGGGTATAATGGAAGGATGGGCTATGTTCCCTCCATGTACCTGCAGCCTTACAACAACCCACGTTCTGGCCTCCACACCCTGCAGAGGAAGCTGCACAGCTCCTCTCTCAATCAGGCAACCCACATGAACAGCTCTATTCTCAACCTGGCATCAAGTGGTGGAAGCCAATCTAGCAACCGCTACCCAGCCACCATGTATGAGGAGACAGAGCTTAAGGAGCATACCACCGAGCCCAGGGGTAATCCGTACCGGGCTCCCCATCTCCAAAAGACCCGCTCTCTGGAGCTCCTGTCTGAGACCCGTCTCGGCATGGCCGTCCCTCCatcccaaagagagagagaagacctgGAGTCAAAGCCGAATCCAGCAATCCGCAAGAGCACCATCAGCGGGGCAGAGTCTTCCATCTCTGACTTCAGCTCGTCAGGCATTGAGTCTCTGGGCCGGAGTATCAGGGCATATTCCTCCAGTGAGGAGGACCCCCTAAGCCCCCCACACAGCACCAAGTCCTCACCCGAGCCAGGGGAGAGGAATAGTGGCCGCAGCCGCCCAGATGAGAGCCTCTCCTCCAGCTCCAGGCCTGAGGCTGGGTCCTGTAAGATGCCCACCACTGCCCCCAGGGTGCCCACGCGACCCAGAGCCCATGAGATCCTGACTCGGTGTACCACCATGACCCGCAAGGCTGCCCTGGCCTCCAGGGGGGAGTTCTCCCTGCAGGACCCCATCCAGACCCACAAGAAAGGTTGGCAGCAGTGGTAGGGGAAGTGGGGGACAAGGTCATGGGGAGCCGTGGGGAGTGCTGGTTTTGGGGTTATGTTGAAACTCGTCTCTCGTGATCGACTTTACATGTAGCGCAATACTTTGAGAATGGCTCATGAGACTATGGTTAAATTAGCATAAGAACGCCTGCTGTATGCTACACTAACTATGACTCCCTCCAACAATTTTTATGTGAGTAAATGTACCTGTCAAATAAAAAACTCTTGACAGGCCTTTTATCCATAATCAGAGTTAAGATGGGAAGGAAACATATTGTACTTCTGTTCTTTATTCAGTAACTTAAAAGTTAGGTGACAAAGTACTTTTTCAGATGTGCAAAGTCTCATCCGCTTTAGATCTACCCCTTTGTAGTTCACCAATGACTGGTTTGTTTGTAGTTGACCAATGACTGGTTTGTTTGTAGTTGACCAATGACTGGTTTGTTTGTTGTAGCCTACATGTCATACTTCTATTGGTGTCTGAAGTCACTGTTATTCCATACTGGAATTTTACTGTAACTATTTACCATTACTGTCTGTATGCCTTATATGCATGTCTAACTAATATAGTGTGCATTAAACAAT

Function

NR:

description
NADPH oxidase organizer 1-like

GO: NA

KEGG:

id description
K17934 NOXO1, SNX28; NADPH oxidase organizer 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036960675.1 False 2230 mRNA 0.50 8 48651176 48658033
XM_021581249.2 True 2248 mRNA 0.50 8 48651176 48658045

Neighbor

gene id symbol gene type direction distance location
LOC110503133 LOC106609742 coding downstream 9262 48637596 ~ 48641914 (-)
LOC110502904 LOC106609741 coding downstream 56308 48562471 ~ 48594868 (-)
meiob meiob coding downstream 106829 48537892 ~ 48544347 (-)
LOC110502902 LOC106609735 coding downstream 117042 48531380 ~ 48534134 (-)
LOC110502901 NA coding downstream 122874 48520679 ~ 48528302 (-)
LOC110502909 cq039 coding upstream 28494 48686539 ~ 48696327 (-)
LOC110503134 LOC106610058 coding upstream 62015 48720060 ~ 48724580 (-)
LOC110502911 LOC106609787 coding upstream 71561 48729606 ~ 48838648 (-)
LOC110503135 trrap coding upstream 307233 48965278 ~ 49138248 (-)
LOC110503068 LOC106609795 coding upstream 483831 49141876 ~ 49145958 (-)
G1874758 NA non-coding downstream 34763 48615457 ~ 48616413 (-)
G1874756 NA non-coding downstream 42004 48608956 ~ 48609172 (-)
G1874343 NA non-coding downstream 143918 48502391 ~ 48507258 (-)
G1874341 NA non-coding downstream 152602 48497942 ~ 48498574 (-)
G1874338 NA non-coding downstream 160246 48490617 ~ 48490930 (-)
G1874745 NA non-coding upstream 54135 48712180 ~ 48715028 (-)
G1874805 NA non-coding upstream 61562 48719607 ~ 48719877 (-)
G1874808 NA non-coding upstream 67587 48725632 ~ 48726067 (-)
G1874809 NA non-coding upstream 69378 48727423 ~ 48727736 (-)
G1873183 NA other downstream 1391243 47257593 ~ 47312395 (-)
LOC110502870 PHF5A other downstream 1571386 47067897 ~ 47079813 (-)
G1873043 NA other downstream 1689523 46960622 ~ 46961653 (-)
G1875310 NA other upstream 646474 49304519 ~ 49307135 (-)
LOC110503141 LOC106610139 other upstream 1123567 49732121 ~ 49855083 (-)
G1875984 NA other upstream 1393246 50051291 ~ 50052791 (-)
LOC110503025 LOC106610281 other upstream 1554005 50212050 ~ 50253496 (-)

Expression


Co-expression Network