LOC110502925 (LOC106610356)


Basic Information

Item Value
gene id LOC110502925
gene name LOC106610356
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 50025694 ~ 50043368 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021581274.2
CACATTATTTTTATTGATTTTAAATCAATTATTGGGGGGATGAATCGACCTGTTCTGAATGTTGTGGGGGGACATATCTCCCCTGCCAATTACAAGCATCATTTACTTTACTTTTCTATGAACTGTGATACCTTTTCAAAAAGTGATTTATTGCCCACCTTCCCTACAGAATCGCATGCTCCATCCATGACAGTGTGGGGGTCCAGAGTGAAGCGCTGCATGGGGCCTATCGTCTACACAGCTCCCCCAGATGGTGGCTGGGGCTGGGTGGTGGCGGTCTCCTTCTTCCTGGTGGAAGTGTTCACCTACGGAGTCATCAAGAGCCTGGGCATCTTCCTCCAGGACCTGATGGGGGAGTTTGGGGAGAGCAACAGCCGAGTCTCTTGGATCATCTCCATCTGTGTCTTCGTCATGGCCTTCACTGCTCCTCTCGCTTCTGTGATGACCAACCGGTTTGGCTTCCAGACAGTTGTTATGATTGGTGGACTCCTCATCTCCATAGGAACCATCGCCAGTGGCTTCACCAAATCCATCAACGAGATGTACATCACCATCGGACTCGTTGCAGGTCTGGGGTACTGTCTGACCTTCTTGCCCACCATTACTCTCCTGTCCCAGTACTTCTCCCACCGACGCTCCCTGGTCACAGCTGTCGCCTCCACAGGAGAGTCCTTCTCTGTGTTCACGCTCGCCCCAGCCTTCTCTGCTCTAAGGGACTGTATCGGCTGGCGTTACACCCTGGTGGTGATCGGAGCTCTACAGGGCATCATCATCATCTGTGGAGTTCTGCTAAGACCCATCATCATCAGACCTGGACCAGCCACGGAGAAAGAAACTGATGGACTGGCTGACAAAGAGCTGAAGGCTCTGAACACAGAGGAGGAGTACTACAGTAAGGAGAGGTTGTACACTAAGGGCAGTTCATATGTTAAGGATGGGTCTTACACACTGCAGAGGGATAGCAAGCTGGCTCATCGTTACTCCCTGAGCTCTGGAGAGTCTGTAAACTCTGAAGTTCAGTCCCTCCATCACCAGGTCCTGGAGGACGGCAGTAAGGcaggggaggagatagaggaggaggaggcgtcTTCACAGAGGTGCTTAGGAAGcaaggagaaggagatggagaaggaCGAGGAGACGGAGGAGAAGGATGAGAAGCAGACACAAACACTATCCCCCCAGAAACTCCTTGACTTCTCCATGTTAAGAGAAGGCAGCTTCATCTGCTACGCTCTCTTCGGCCTTTTTGCCACATTGGGTTTCTTCGCCCCTCAGCTCTACATCATCGAGCTGAGTGTGAACCGTGGCGTGATGCGTCACCGCGCCGCCCACATGCTCTCCGCCATGGCCTTTGCCGAGATCTTCGGCCGCCTCTCCATTGGTTGGGTGCTAGGCAGGAAGCTGTTCAGAGGCAGGAAGCCCCTGGTGCTGCTGGGATGTGTAGTTCTGCTGTGCCTGGTGCTGGTGGCCTTTACCCTGGTGTGGGAGTTCTGGGGCCTGGCCGTGTGTTGTGGGTTCTATGGGTTTTTTATAGGCACCGTGTCGTCGACACATATACCCATGCTGGCAGAGGAGGATGTGGTGGGCATAGAAAGGATGTCGTCAGCTGTGGGGGTCTATGTGTTTATACAAAGTTTCGCTGGGCTGGCGGGACCACCTCTGGGAGGTGTTCTTGTGGACCTGACTCAGAACTACGGCTCAGCGTTCTACTCCTGTGCGGTGGGAATGAGTCTAGGGGCTGTGTTCCTGGGTCTGGTACGACCAGCGAAGAGAGGCCTGCTCTGCTGCAGCACAACCAGgcctcagagcatttcgtattattctaataatacgaagtgctctgagaccaggttgtacAGCAGGAGGGGGGATCAGAACCTCCCAGAACCCATGCAGGTGGGGCCGGGGAACCCTGTACCTCAGCGAGAGGGGAAGGAGGCCCAGGACAGAGACAGTCCTCAGGACTTCCTAGAAGTTAACCTTGATTTGGACCAGAAAACGTTACTGAAAAAGGCCAACAGATGACAATCTCTACTTGAAAAGACATCACAAAGATCTGGTTTTGGGTGTCTGGAGAGTGGCTCACACTGAACAAAGGaaatcccaatcacggccggttgtgatacagcctgaaatcgaaccagggtgtctgtagcgacgctgaaatgcagtgccttagactgctgcgccacacGGGAGCCCATGAACATGAACATGGCTCATGGTATTGTAAGAGAGGATACAAACAATATGTAGATACATGAAGTCAGCTGTGAAGAAACAATAACACCATGACATCATGTTGTATTCAATTACTTTTTAAACTTCACTTTACATTTTTTAGACAAAGCAATCACTTGGTACTAATAAAACATAAATATCACAATAATGTGTAAAGTCATTGAAGTGCTTTGAATAGAAATGTACATTCTAGGATCTTCCTCTCATCCTAGTGTATATTCATAAATCATATACATTTCCTGATTGTGACCATTCTAGAATTTAGAGGTAAATCTGGAGATTCTATTATCTCCAGACACCTCCTGAGCCACTGTCTGAAGGTCTGGAAGGGCAGAGTGGGTTTGGGACAGTAGGGCTCGGAGTCTGACTAGGAGATAGTGGGCTGTCCAGGGCTAGCTGTTCCCCCCTTCTCTATCCATCGCAGCAAGGTCTGAGAGAGACGAGATATACAGtgcgtttggaaagtattcagacttttcccacattttgttatgttacagccttattcaaaaatggatgaaattgtttttttcccctcaaactacacacaataccccataatg
>XM_036960715.1
GGCTAGGAGCCTACAGCTCTGTTCTAGTATATTACCTTTGTGGACAGTTCCAAATTAAAAACCTTGTATAGCTCACTCATGAGGCCCAATAATCACCCCTGTAGCCTAGTTATAATCTAGTTATATTTTCATTGTGGTTAATTATTTTCTATGTGGTTATTTTCATTAACATTAATTTGTGATTCAAATACTTGGACAGCTTATAGCTTACAGTTTATACTCAAATTGGTTAGGTGTGAAATTTCTGAAGACTCTAGACAGCCCTAGAACAGGGCCCTTTTTGTAGTCCCGTGGATCAATTTCCAAAGACAAAACAATATATATACTTGTGTGGCACCTACCCCCATCCCTGCTTTAGAATGTAGGATAACATGACATCATGAGCTAAGACAAGTATTGGTATTATTCTTTAGGCTAAGTCAAGTCTATAgtactatctgctgttgtctttcCTTTGACCATCTTTGGCTGATGGGTTGTCGACCCACACAgatctatgcacacacacttttgattaaaagacagagacagacaagtcAGCACTGCAGAATGAGTAAAGAGAGTTGTGTTGGATGAGTTGCCAATGCCATAGGCTATTGACCAGAGATAGCATTGCTTATTCATTCATTGAGAAAAGGCTAACTGGATATGAGGACTGGCAATAAAGGCGGAGAGTGAGGCAGGTTTATGCGTGTGTAAACACATGATGGTTGTGTATTGACGTTGTGCTAAATAGCGCAGTAGCATTGATTAGGGTCCTTGATACAAAACAAACGTTGCGTTGATATAGCAGACAGCTGTCCTAAAAAGTCACATTGTTTCCGATGTAAGTAACATCATAACATTGCCTGAAACGAGAATAGTTTGTTACTAACATATGAGATTGTGAACGATATTTAATATTGCCATTTTACCATATAACCCACAGGTAACTATTAGTGCTGAGCGGTTAACCGACATCTATTTTGGGGGGGGGCGGGGTTGACCGAGATCGGTTCAATTACCTGTACTTCAATTCCATTTAGTTCCGTTTTTTTGTGAGCCTAAAGCCCCCTTTCTCTTgagagaaatcaaatcattcacCAGAGAATGGAAcgctgggctgaagggagttTTAGTTTTCATTAAAGAAATATTCCGCCTAGTTCAGCCCAGAAAAGttgtaattaactacaatgaccgtGATCCATTGCGCCTTATCCGGCTCGGACATAGATGGATACACTTACACTTTAACGCCTACTAAATTAGGTTAGATACAGACAGAACGCATACACGAACAGATAGCATTCGAGATGAATGTACACAACACAAGGAAGAAAGATATGGATAGAGAGATCGTAAAATTATACCTTAAGtactttgaagaactagtcaAATGATTTAATCAGACAGCTCTGCTggctagcctagctaaatagatgacagtacagtattggGAGCAGAGAGAACGTTGTCTGGCCGTTTGGCAGCTACTTCCAGAGCAGCGATGTGATGATGACTTTTAAGGAATGAAAAATAATAGTCATCAAATAACAGCTAAAATCGCATGCTCCATCCATGACAGTGTGGGGGTCCAGAGTGAAGCGCTGCATGGGGCCTATCGTCTACACAGCTCCCCCAGATGGTGGCTGGGGCTGGGTGGTGGCGGTCTCCTTCTTCCTGGTGGAAGTGTTCACCTACGGAGTCATCAAGAGCCTGGGCATCTTCCTCCAGGACCTGATGGGGGAGTTTGGGGAGAGCAACAGCCGAGTCTCTTGGATCATCTCCATCTGTGTCTTCGTCATGGCCTTCACTGCTCCTCTCGCTTCTGTGATGACCAACCGGTTTGGCTTCCAGACAGTTGTTATGATTGGTGGACTCCTCATCTCCATAGGAACCATCGCCAGTGGCTTCACCAAATCCATCAACGAGATGTACATCACCATCGGACTCGTTGCAGGTCTGGGGTACTGTCTGACCTTCTTGCCCACCATTACTCTCCTGTCCCAGTACTTCTCCCACCGACGCTCCCTGGTCACAGCTGTCGCCTCCACAGGAGAGTCCTTCTCTGTGTTCACGCTCGCCCCAGCCTTCTCTGCTCTAAGGGACTGTATCGGCTGGCGTTACACCCTGGTGGTGATCGGAGCTCTACAGGGCATCATCATCATCTGTGGAGTTCTGCTAAGACCCATCATCATCAGACCTGGACCAGCCACGGAGAAAGAAACTGATGGACTGGCTGACAAAGAGCTGAAGGCTCTGAACACAGAGGAGGAGTACTACAGTAAGGAGAGGTTGTACACTAAGGGCAGTTCATATGTTAAGGATGGGTCTTACACACTGCAGAGGGATAGCAAGCTGGCTCATCGTTACTCCCTGAGCTCTGGAGAGTCTGTAAACTCTGAAGTTCAGTCCCTCCATCACCAGGTCCTGGAGGACGGCAGTAAGGcaggggaggagatagaggaggaggaggcgtcTTCACAGAGGTGCTTAGGAAGcaaggagaaggagatggagaaggaCGAGGAGACGGAGGAGAAGGATGAGAAGCAGACACAAACACTATCCCCCCAGAAACTCCTTGACTTCTCCATGTTAAGAGAAGGCAGCTTCATCTGCTACGCTCTCTTCGGCCTTTTTGCCACATTGGGTTTCTTCGCCCCTCAGCTCTACATCATCGAGCTGAGTGTGAACCGTGGCGTGATGCGTCACCGCGCCGCCCACATGCTCTCCGCCATGGCCTTTGCCGAGATCTTCGGCCGCCTCTCCATTGGTTGGGTGCTAGGCAGGAAGCTGTTCAGAGGCAGGAAGCCCCTGGTGCTGCTGGGATGTGTAGTTCTGCTGTGCCTGGTGCTGGTGGCCTTTACCCTGGTGTGGGAGTTCTGGGGCCTGGCCGTGTGTTGTGGGTTCTATGGGTTTTTTATAGGCACCGTGTCGTCGACACATATACCCATGCTGGCAGAGGAGGATGTGGTGGGCATAGAAAGGATGTCGTCAGCTGTGGGGGTCTATGTGTTTATACAAAGTTTCGCTGGGCTGGCGGGACCACCTCTGGGAGGTGTTCTTGTGGACCTGACTCAGAACTACGGCTCAGCGTTCTACTCCTGTGCGGTGGGAATGAGTCTAGGGGCTGTGTTCCTGGGTCTGGTACGACCAGCGAAGAGAGGCCTGCTCTGCTGCAGCACAACCAGgcctcagagcatttcgtattattctaataatacgaagtgctctgagaccaggttgtacAGCAGGAGGGGGGATCAGAACCTCCCAGAACCCATGCAGGTGGGGCCGGGGAACCCTGTACCTCAGCGAGAGGGGAAGGAGGCCCAGGACAGAGACAGTCCTCAGGACTTCCTAGAAGTTAACCTTGATTTGGACCAGAAAACGTTACTGAAAAAGGCCAACAGATGACAATCTCTACTTGAAAAGACATCACAAAGATCTGGTTTTGGGTGTCTGGAGAGTGGCTCACACTGAACAAAGGaaatcccaatcacggccggttgtgatacagcctgaaatcgaaccagggtgtctgtagcgacgctgaaatgcagtgccttagactgctgcgccacacGGGAGCCCATGAACATGAACATGGCTCATGGTATTGTAAGAGAGGATACAAACAATATGTAGATACATGAAGTCAGCTGTGAAGAAACAATAACACCATGACATCATGTTGTATTCAATTACTTTTTAAACTTCACTTTACATTTTTTAGACAAAGCAATCACTTGGTACTAATAAAACATAAATATCACAATAATGTGTAAAGTCATTGAAGTGCTTTGAATAGAAATGTACATTCTAGGATCTTCCTCTCATCCTAGTGTATATTCATAAATCATATACATTTCCTGATTGTGACCATTCTAGAATTTAGAGGTAAATCTGGAGATTCTATTATCTCCAGACACCTCCTGAGCCACTGTCTGAAGGTCTGGAAGGGCAGAGTGGGTTTGGGACAGTAGGGCTCGGAGTCTGACTAGGAGATAGTGGGCTGTCCAGGGCTAGCTGTTCCCCCCTTCTCTATCCATCGCAGCAAGGTCTGAGAGAGACGAGATATACAGtgcgtttggaaagtattcagacttttcccacattttgttatgttacagccttattcaaaaatggatgaaattgtttttttcccctcaaactacacacaataccccataatg
>XM_036960714.1
agagagagagagagagagagagagagagagagagagagagagagagagagagaaggagagagagagagagagagtgcagcagTAAGGTTCTCACTGGTTTCACACAACATTAATTGAACAGCACACAGGGTTACTCTACAGCGCACAGGATAAGTGGAAGCAATATGACAGAGACTAACCCAGGGGATTTGCATTCACCTGTGGTTCTTCGAGATCAGTTCACTAAAGAATCGCATGCTCCATCCATGACAGTGTGGGGGTCCAGAGTGAAGCGCTGCATGGGGCCTATCGTCTACACAGCTCCCCCAGATGGTGGCTGGGGCTGGGTGGTGGCGGTCTCCTTCTTCCTGGTGGAAGTGTTCACCTACGGAGTCATCAAGAGCCTGGGCATCTTCCTCCAGGACCTGATGGGGGAGTTTGGGGAGAGCAACAGCCGAGTCTCTTGGATCATCTCCATCTGTGTCTTCGTCATGGCCTTCACTGCTCCTCTCGCTTCTGTGATGACCAACCGGTTTGGCTTCCAGACAGTTGTTATGATTGGTGGACTCCTCATCTCCATAGGAACCATCGCCAGTGGCTTCACCAAATCCATCAACGAGATGTACATCACCATCGGACTCGTTGCAGGTCTGGGGTACTGTCTGACCTTCTTGCCCACCATTACTCTCCTGTCCCAGTACTTCTCCCACCGACGCTCCCTGGTCACAGCTGTCGCCTCCACAGGAGAGTCCTTCTCTGTGTTCACGCTCGCCCCAGCCTTCTCTGCTCTAAGGGACTGTATCGGCTGGCGTTACACCCTGGTGGTGATCGGAGCTCTACAGGGCATCATCATCATCTGTGGAGTTCTGCTAAGACCCATCATCATCAGACCTGGACCAGCCACGGAGAAAGAAACTGATGGACTGGCTGACAAAGAGCTGAAGGCTCTGAACACAGAGGAGGAGTACTACAGTAAGGAGAGGTTGTACACTAAGGGCAGTTCATATGTTAAGGATGGGTCTTACACACTGCAGAGGGATAGCAAGCTGGCTCATCGTTACTCCCTGAGCTCTGGAGAGTCTGTAAACTCTGAAGTTCAGTCCCTCCATCACCAGGTCCTGGAGGACGGCAGTAAGGcaggggaggagatagaggaggaggaggcgtcTTCACAGAGGTGCTTAGGAAGcaaggagaaggagatggagaaggaCGAGGAGACGGAGGAGAAGGATGAGAAGCAGACACAAACACTATCCCCCCAGAAACTCCTTGACTTCTCCATGTTAAGAGAAGGCAGCTTCATCTGCTACGCTCTCTTCGGCCTTTTTGCCACATTGGGTTTCTTCGCCCCTCAGCTCTACATCATCGAGCTGAGTGTGAACCGTGGCGTGATGCGTCACCGCGCCGCCCACATGCTCTCCGCCATGGCCTTTGCCGAGATCTTCGGCCGCCTCTCCATTGGTTGGGTGCTAGGCAGGAAGCTGTTCAGAGGCAGGAAGCCCCTGGTGCTGCTGGGATGTGTAGTTCTGCTGTGCCTGGTGCTGGTGGCCTTTACCCTGGTGTGGGAGTTCTGGGGCCTGGCCGTGTGTTGTGGGTTCTATGGGTTTTTTATAGGCACCGTGTCGTCGACACATATACCCATGCTGGCAGAGGAGGATGTGGTGGGCATAGAAAGGATGTCGTCAGCTGTGGGGGTCTATGTGTTTATACAAAGTTTCGCTGGGCTGGCGGGACCACCTCTGGGAGGTGTTCTTGTGGACCTGACTCAGAACTACGGCTCAGCGTTCTACTCCTGTGCGGTGGGAATGAGTCTAGGGGCTGTGTTCCTGGGTCTGGTACGACCAGCGAAGAGAGGCCTGCTCTGCTGCAGCACAACCAGgcctcagagcatttcgtattattctaataatacgaagtgctctgagaccaggttgtacAGCAGGAGGGGGGATCAGAACCTCCCAGAACCCATGCAGGTGGGGCCGGGGAACCCTGTACCTCAGCGAGAGGGGAAGGAGGCCCAGGACAGAGACAGTCCTCAGGACTTCCTAGAAGTTAACCTTGATTTGGACCAGAAAACGTTACTGAAAAAGGCCAACAGATGACAATCTCTACTTGAAAAGACATCACAAAGATCTGGTTTTGGGTGTCTGGAGAGTGGCTCACACTGAACAAAGGaaatcccaatcacggccggttgtgatacagcctgaaatcgaaccagggtgtctgtagcgacgctgaaatgcagtgccttagactgctgcgccacacGGGAGCCCATGAACATGAACATGGCTCATGGTATTGTAAGAGAGGATACAAACAATATGTAGATACATGAAGTCAGCTGTGAAGAAACAATAACACCATGACATCATGTTGTATTCAATTACTTTTTAAACTTCACTTTACATTTTTTAGACAAAGCAATCACTTGGTACTAATAAAACATAAATATCACAATAATGTGTAAAGTCATTGAAGTGCTTTGAATAGAAATGTACATTCTAGGATCTTCCTCTCATCCTAGTGTATATTCATAAATCATATACATTTCCTGATTGTGACCATTCTAGAATTTAGAGGTAAATCTGGAGATTCTATTATCTCCAGACACCTCCTGAGCCACTGTCTGAAGGTCTGGAAGGGCAGAGTGGGTTTGGGACAGTAGGGCTCGGAGTCTGACTAGGAGATAGTGGGCTGTCCAGGGCTAGCTGTTCCCCCCTTCTCTATCCATCGCAGCAAGGTCTGAGAGAGACGAGATATACAGtgcgtttggaaagtattcagacttttcccacattttgttatgttacagccttattcaaaaatggatgaaattgtttttttcccctcaaactacacacaataccccataatg

Function

NR:

description
monocarboxylate transporter 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021581274.2 False 2807 mRNA 0.50 7 50025694 50029688
XM_036960715.1 False 4181 mRNA 0.47 8 50025694 50042834
XM_036960714.1 True 2866 mRNA 0.51 9 50025694 50043368

Neighbor

gene id symbol gene type direction distance location
LOC110502940 LOC106610375 coding downstream 5903 50010376 ~ 50019792 (-)
LOC110502930 LOC106610386 coding downstream 38804 49975399 ~ 49986890 (-)
LOC110502943 NA coding downstream 58659 49945844 ~ 49967035 (-)
LOC110503141 LOC106610139 coding downstream 170611 49732121 ~ 49855083 (-)
LOC110502932 LOC106610076 coding downstream 391830 49591993 ~ 49633864 (-)
LOC110502931 LOC106610342 coding upstream 9466 50052834 ~ 50067792 (-)
LOC110502926 LOC106610323 coding upstream 35239 50077523 ~ 50101700 (-)
LOC110503023 LOC106610308 coding upstream 67052 50110420 ~ 50146309 (-)
LOC118943861 NA coding upstream 148156 50191524 ~ 50194275 (-)
LOC110503025 LOC106610281 coding upstream 171700 50212050 ~ 50253496 (-)
G1876015 NA non-coding downstream 2720 50022764 ~ 50022974 (-)
G1876013 NA non-coding downstream 4206 50021145 ~ 50021488 (-)
G1876012 NA non-coding downstream 5256 50020230 ~ 50020438 (-)
G1876007 NA non-coding downstream 15501 50009993 ~ 50010193 (-)
G1876021 NA non-coding upstream 2265 50045633 ~ 50045943 (-)
G1875988 NA non-coding upstream 5499 50048867 ~ 50049071 (-)
G1876076 NA non-coding upstream 192887 50236255 ~ 50237343 (-)
G1875310 NA other downstream 718559 49304519 ~ 49307135 (-)
LOC110502911 LOC106609787 other downstream 1288412 48729606 ~ 48838648 (-)
LOC110503133 LOC106609742 other downstream 1383823 48637596 ~ 48641914 (-)
LOC110502901 NA other downstream 1504022 48520679 ~ 48528302 (-)
G1875984 NA other upstream 7923 50051291 ~ 50052791 (-)
G1876460 NA other upstream 411953 50455321 ~ 50455709 (-)
G1876522 NA other upstream 722662 50766030 ~ 50770317 (-)
G1877873 LOC106610563 other upstream 1714794 51758162 ~ 51765341 (-)

Expression


Co-expression Network