LOC118943861


Basic Information

Item Value
gene id LOC118943861
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 50191524 ~ 50194275 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039168.1
CACGATACATTGTCTCTCACCCTTTGTGCTCCCTTTTGTGCAACATTTAGCTGAACTCAGAGGACTCGGACCCGTAAATTCACCGTGAAGGTCTGAAGAAACATGGAAATATATTTTGCAGGCATCGGCAGGCCACGGCACTCGCTCTGGCGCACTGCGGGGCAGAGGTCATGGCTGTCACAAGCACGCAGGCTGACCTGGACAGCATTCTGCTGCAGTGTCCATCAATCAAGCCAGTGTGTGTGGACCTAGGGAACTGGGGGGCCACAGAGGAGGCGCTATGGGAGGCTGTTGGTAAAGCTGATCTCCTGGTGAATAAAGCAGCCTGCGTCATGCTGGAGCCCTTCCTAGAGGTCGCCCCCAACCAGTTTGACACGTAAAGAAGCTCTCTTTGTTGTCCTTTGATTCATGTATTGATTCATATTCATTAAAGTGAAACACAAGTCACTCAAGGCAAGGTATTAGACCTGTGTTTTAGACCTAGAGTACATGTATTAGACCTGTGTTTTAGACCTAGAGTACATGTATTAGACCTGTGTTTTAGACCTAGAGTACATGTATTAGACCTGTGTTTTAGACCTAGAGTACATGTATTAGATCTACAGTACATGTATTAGACCTGTGTTTTAGACCTAGAGTACACGTATTAGACCTGTGTTTTAGACCCAGAGTACATGTATTAGACCTAGAGTACATGTTTTAGACCTGTGCTTTAGACCTAGAGTACATGTATTAGACCTGTGCTTTAGCCCCAGAGTACATGTATTAGACCTGTGTTTTAGACCTAGAGTACATGTATTAGACCTGTGTTTTAGACATAGAGTACATGTTTTAGACCTGTGTTTTAGACCCAGAGTACATGTATTAGACCTAGAGTACATGTATTAGACCTGTGTTTTAGACCTAGAGTACATGTATTAGACCTGTGTTTTAGACCTAGAGTACATGTATTAGATCTACAGTACATGTATTAGACCTGTGTTTTAGACCTAGAGTACACGTATTAGACCTGTGTTTTAGACCCAGAGTACATGTATTAGACCTAGAGTACATGTATTAGACCTGTGTTTTAGACATAGAGTACATGTATTAGACCTGTGTTTTAGACCTAGAGTACATGTTTTAGACCTGTGCTTTAGACCCAGAGTACATGTATTAGACCTGTGTTTTAGACCCAGAGTACATGTATTAGACCTAGAGTACATGTATTAGACCTGTGTTTTAGACCTAGAGTACATGTACTAGACCTGTGTTTTAGACCTAGAGTACATGTATTAGACCTGTGTTTTAGACCTAGAGTACATGTATTAGACCTGTGTTTTAGACCTAGAGTACATGTATTAGACCTGTGTTTTAGACCTAGAGTACATGTATTAGACCTGTGCTTTAGACCTAGAGTACATGTATTAGACCTGTGTTTTAGACCTAGAGTACATGTATTAGACCTGTGTTTTAGACCTAGAGTACATGTATTAGACCTGTGCTTTAGACCTACATAAAgtacagtgtatttggaaagtattcagactttttccacatttcgttacattacagccttattctaaaatggatgaaatgttCTCCAaagcaatctacacaaaatgaCAAAACAGAAAGACATTTTTGCATATGTATAAAAACTTAAATAACTGTGTGATTTAACATTTGATACTGGTGCTTTTCTATTTACCAATTTctgtgtttgtgcttttctaataaccgttttctgtgttcatgcaagtgactgactgAACGAACCCTCACAATCAGTATCTgtaatttgacagtacgtccagaCCCTTGTTTTGAGAACAAAAGATATCTctgtttcaaggtctcagcttagagagatgAAGCCgcgtgaggtattggtctgtcacatgcatgACCCAGTACTGGTCAGTCACATGAAGGAAGCAAACGTTAGTGATGAATTAATTATGAttgaataagctaaatcatgcaaatacaACTTGTCTGCATATAagagaactaacgggactgccccgATAGAGCTCTTGATCGACATGTGTacatggtgcattgagttggttggaacctctccagcacgctgataataaacaatgatttatacaagattgactttgagtgtcccatGTGTAAGAATTTCCAAAACAATTTGGTGTCAACGAACAGGATGATTGAT

Function

NR:

description
PREDICTED: L-xylulose reductase isoform X2

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039168.1 True 2167 mRNA 0.40 3 50191524 50194275

Neighbor

gene id symbol gene type direction distance location
LOC110503023 LOC106610308 coding downstream 45215 50110420 ~ 50146309 (-)
LOC110502926 LOC106610323 coding downstream 89824 50077523 ~ 50101700 (-)
LOC110502931 LOC106610342 coding downstream 123732 50052834 ~ 50067792 (-)
LOC110502925 LOC106610356 coding downstream 148156 50025694 ~ 50043368 (-)
LOC110502940 LOC106610375 coding downstream 171733 50010376 ~ 50019792 (-)
LOC110503025 LOC106610281 coding upstream 20793 50212050 ~ 50253496 (-)
LOC110503026 LOC106610130 coding upstream 102375 50296650 ~ 50297792 (-)
LOC110502946 LOC106610271 coding upstream 165008 50359283 ~ 50410527 (-)
LOC110502949 csnk1d coding upstream 301548 50495823 ~ 50513514 (-)
LOC110503027 LOC106610207 coding upstream 326639 50520914 ~ 50593400 (-)
G1875988 NA non-coding downstream 142453 50048867 ~ 50049071 (-)
G1876021 NA non-coding downstream 145581 50045633 ~ 50045943 (-)
G1876017 NA non-coding downstream 159507 50031799 ~ 50032017 (-)
G1876016 NA non-coding downstream 160849 50030451 ~ 50030675 (-)
G1876076 NA non-coding upstream 41980 50236255 ~ 50237343 (-)
G1876077 NA non-coding upstream 43167 50237442 ~ 50238234 (-)
G1876052 NA non-coding upstream 73159 50267434 ~ 50269466 (-)
G1876050 NA non-coding upstream 81446 50275721 ~ 50276830 (-)
G1875984 NA other downstream 138733 50051291 ~ 50052791 (-)
LOC110503141 LOC106610139 other downstream 345196 49732121 ~ 49855083 (-)
G1875310 NA other downstream 884389 49304519 ~ 49307135 (-)
LOC110502911 LOC106609787 other downstream 1454242 48729606 ~ 48838648 (-)
LOC110503133 LOC106609742 other downstream 1549653 48637596 ~ 48641914 (-)
G1876460 NA other upstream 261046 50455321 ~ 50455709 (-)
G1876522 NA other upstream 571755 50766030 ~ 50770317 (-)
G1877873 LOC106610563 other upstream 1563887 51758162 ~ 51765341 (-)
G1877882 NA other upstream 1598343 51792618 ~ 51792968 (-)

Expression


Co-expression Network