LOC110502973 (abcb10)


Basic Information

Item Value
gene id LOC110502973
gene name abcb10
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 53858719 ~ 53864562 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110502973
AATAGCTTCAGAAAGAGGTCTCCTTAACGCTAGCGCACTTGAGTTGTCATTGTTCTTGCTTTTCTGTCTCTTAGTCGCTCGCTAACTGTCTTGCAGAATGGGACTGTTGCTGTTGTCAAGATGTCTAGGCGTAAATCTTTTGAAACGCAATGTTCAATCCCGTACACATAGACTAGTTTGATTAGAATGCCAGACGTCCCGTGGGCGAGAGGTAAAGTGGAAAAGGTTCAAACCTTTGGCACGCGCTTCGCTTTTACCCCGGCGGAGATGCACTGTGTTCCACTTGCATAGTTGAGGAGCTCATGGACAACCACGGTCAACTTAGCCAACTACAGCTCCTCCACAGACTCCGAACAAGCAACACAACAAGAAGTTAACAGCAAAGATCTGCAATCaacagaaacaaaacaaactcCAACTTGCGTCTGTCTGGTAGGACATGTCACTGGTTCACTGTACAACAGGGACAACTTCTAGAATGACAAACGTGGCACTGAAATAACACTGTTATCACTAACTTGTGCCTGTGTAGGGTTGACTTCATTACAACCTTTATTCCTTACTTAGGCCCTATTTGTTGTCATGaaagtttatatattttttttaacaataaTGAAGTAACTTTCAGTTTTGATTCTTATATTTTATCTACGCTATCCTCCACAGCGGCTGTGGGTTTCCTGGTGGTTTCTAGTGCTTGACACCATCTATTCAGTGCTTCCCTCTGCTCTCGGTGTATCACGCTCTTATGGGTGTTTCTCTGTGGGGGCGCTGCCAATGCAGCCCGTGTCTACCTCATGCAAATCTCAGGTGTGTGTCACCATTTGCTTCCAGTGCATGCAGAGGTTTCCATAGCGATTACACAGGTGACTGACTATAAGGGAACTTAACTTACTTTACACTTTGATGCCATACAGAGTAAATGTGTTACACAATTAGGTTATGACTCTTGCAGGGCAACATATTGTAAGAAATCTACGCGTATCTCTATTTTCCACAATTCTGAGGCAGGTTTCTTTGATAAGACCCTTACCGGGGAGCTCATTGTTTGCCAACACGGCTGTCATCGGGCACTCCCTCACTGACAACCTCTCCGGCGGGCTCCGCGCTCGCAGCAGCTGGGATCAGCATGGTGGTGAGAAACAGTTTTATGTGTCACCCAGTTTAGCAGCTTTTGTGCTTCTGAACATGCCTCCTATGGCTGGCCTGGCTGTCATATACGGGAGATACCTGCACTCCGTATCCAAATGCACACAGGACTCTCTGGCCGAGGCCACACAGTTGGCAGAAGAGCGTATCAGCAACATGAGGACAGTTTGTGTGTTTGGTAAGGAGCTGACAGAAGTGGCCAAGTATACAGAGAAGGCCAACTACATTCTCCACCTGGCCAAACAGGAAGCTGTTTTGCTGGCCGGGTTCTTTGGAGTGACAGGACTCAGTGGTAACATCATCATCCTCTCTGTGCTGTAGAAGGGAGGGCTATTGATGGCCACCGAGCACATAACTGTGGGAAAGCTCTCTTCATTCCTCAAGTACGCCTTCTGGGTGGGCATTAGCATTGCAGGTGGTCAAAAACAGATAATTGCTATTGCAAGGGCTCTGCTCAAGAACCCCAAGATACTTCTACTTGATGAGGCTACAAGgaaggccataaagatcatcaaggacatcaaccacccgagccactgcctgttcaccccgctatcatccagaaggcgagTGCCCTGGATGCAGAGAATGAGTTCCTGGTCCAGGAGGCTCTAGAGCAGCTCATGGATGGGAGAACGGTGCTGATCATCGCCCACCGCCTCACCACCATCCAGAACGCTGACGCTGTGGCGGTGCTGGGCCAACGGTGTGTGGTGGAGTGTGGTCAGCACGCACAGCTCCTTGGCAACTACCAAGGCCTCTTCAGGAAGCTGATGGAGAAACTAGCCTTCTTCTAAGAGGGGCAAAAGCAAGCGTTGAAAAGAGCAGAGGATAGGGGAGTTCTTTAAATGTAGAGAAAGTGCCTTTACAGTAGCTGTGTGGTGATGTGCTCTTCTACACTCCTCAGTACGTCAGTGTGTGAATCAGATGAAGCTGCATGTGCATATCAAATAGATCATGGATGATTTTGGACGTGTCAAATGTGAGTACTGCAGATATCTCATATAACTGCTGGGATTCATTTTGAGATGGTCAATGGGGTTGGCTTCTCTTCTTGAGGACACCCAACTCATTGCGGAGCCTCAAGAGGTTAGTGTTTCCTGAAAATAAGAAGGACATTAAAACTCTGAAGTATGTCACGTAAATATTGTCAATTAGGCAGATCTATTTCCAAGACACGGCAAACATACAGAGAACTGAAATACAAGCTACATTGTCATAAATGTAGATAATCAAATAACATCTTATATTCCAGGTGATAAATCCACTGATCAGTTGTGAAAATGATGTGCCTCTCCATGAAAATATTATGCTATTCAAAGGTGCTTTTGGGACTTTGTTACCAGTTTGGTGAACATGTCTAAACAATCTAACATTCAGTAGGTAAAATTTAATTCAAATCTATGTATCGCCCTAGCTAACACACcggactccaataatcaactaataaTGATATTCAGTGTAGAATGTAATTaatttaatcagctgtgttttgcTAAGGGTGggggaaaagtgtgacaccactCTGGCCCCCCGTGGACTGGAGTTACCTGTTCCTACATCACTTTTACTCATATCTATATAAAATCTCTAATTGATATTCTGTGAATACTTTTTCAAATTAACCCCCACTTATAGCCCTACTAATACAGCAGATGCAGTACTGACATTACATGACAGGTTTATATCATACTCAGTCATCACATATTCTCTGAAAATATTTCCTCATACCAAAAGAGGGTGCTATtaccctatttttttttttttctctccaatccGTGTGTGTAAAGTGTGTTTAAAAAAGTTCTAATTTTACCTGAACTACaggtaacaaaaatataaatgcaatatgtaaagtgttggtcccatactTCATGAGCTCAAATAAAAATTCCTAGAaata

Function

symbol description
abcb10 Predicted to enable ATP binding activity and ATPase-coupled transmembrane transporter activity. Acts upstream of or within erythrocyte differentiation. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human ABCB10 (ATP binding cassette subfamily B member 10).

NR:

description
ATP-binding cassette sub-family B member 10, mitochondrial-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110502973 True 3052 mRNA 0.44 8 53858719 53864562

Neighbor

gene id symbol gene type direction distance location
LOC100135949 actc1 coding downstream 3683 53851919 ~ 53855036 (-)
ccsapb LOC106610728 coding downstream 7067 53848627 ~ 53851652 (-)
pdcd2 pdcd2 coding downstream 74637 53779267 ~ 53784082 (-)
LOC110502966 phf10 coding downstream 124099 53716988 ~ 53734620 (-)
LOC110502964 LOC106610676 coding downstream 287238 53565101 ~ 53571481 (-)
LOC110503036 LOC106610742 coding upstream 174456 54039018 ~ 54073953 (-)
LOC110503071 NA coding upstream 348695 54213257 ~ 54217097 (-)
LOC110502978 LOC106610780 coding upstream 388319 54252881 ~ 54282773 (-)
LOC110502980 LOC106610792 coding upstream 514855 54379417 ~ 54423946 (-)
LOC110502982 LOC106610932 coding upstream 697380 54561942 ~ 54563802 (-)
G1880538 NA non-coding downstream 11789 53845948 ~ 53846930 (-)
G1880536 NA non-coding downstream 12949 53844291 ~ 53845770 (-)
G1880528 NA non-coding downstream 17823 53839525 ~ 53840896 (-)
G1880514 NA non-coding downstream 44293 53814206 ~ 53814426 (-)
G1880506 NA non-coding downstream 53872 53802248 ~ 53804847 (-)
G1880549 NA non-coding upstream 15843 53880405 ~ 53880688 (-)
G1880556 NA non-coding upstream 24277 53888839 ~ 53889186 (-)
G1880557 NA non-coding upstream 26796 53891358 ~ 53891626 (-)
G1880561 NA non-coding upstream 35294 53899856 ~ 53900116 (-)
G1880563 NA non-coding upstream 37902 53902464 ~ 53977108 (-)
G1879406 NA other downstream 694368 53163242 ~ 53164351 (-)
G1878770 NA other downstream 1215210 52643088 ~ 52643509 (-)
LOC110502957 LOC106610540 other downstream 1542941 52271405 ~ 52315778 (-)
G1878324 NA other downstream 1651092 52207428 ~ 52207627 (-)
G1878101 NA other downstream 1820969 52036596 ~ 52037750 (-)
G1880780 NA other upstream 380220 54244782 ~ 54246686 (-)
G1881414 NA other upstream 1138204 55002766 ~ 55003624 (-)
G1883219 NA other upstream 2741444 56606006 ~ 56610640 (-)
G1883244 NA other upstream 2779445 56644007 ~ 56709888 (-)

Expression


Co-expression Network