Gene
RNA
| Item | Value |
|---|---|
| gene id | si:ch73-52p7.1 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 54471595 ~ 54472979 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC103035101 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036959914.1 | True | 465 | mRNA | 0.48 | 2 | 54471595 | 54472979 |
54,468,800
54,469,200
54,469,600
54,470,000
54,470,400
54,470,800
54,471,200
54,471,600
54,472,000
54,472,400
54,472,800
54,473,200
54,473,600
54,474,000
54,474,400
54,474,800
54,475,200
54,475,600
NC_048587.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502981 | LOC106610814 | coding | upstream | 9189 | 54428818 ~ 54462406 (+) |
| LOC110502979 | LOC106610787 | coding | upstream | 109174 | 54329710 ~ 54362634 (+) |
| LOC110503037 | LOC106610766 | coding | upstream | 281190 | 54113713 ~ 54190405 (+) |
| LOC110502976 | LOC106610750 | coding | upstream | 373774 | 54074356 ~ 54097821 (+) |
| LOC110502975 | galt2 | coding | upstream | 443666 | 53902441 ~ 54027929 (+) |
| LOC110502983 | LOC106610821 | coding | downstream | 120382 | 54593361 ~ 54610361 (+) |
| LOC110502989 | LOC106610853 | coding | downstream | 221896 | 54694875 ~ 54728124 (+) |
| LOC118943891 | NA | coding | downstream | 477555 | 54950534 ~ 54962738 (+) |
| LOC110502992 | LOC106610889 | coding | downstream | 598209 | 55071188 ~ 55169539 (+) |
| dync2li1 | dync2li1 | coding | downstream | 700064 | 55173043 ~ 55182204 (+) |
| G1880338 | NA | non-coding | upstream | 2745 | 54468625 ~ 54468850 (+) |
| G1880332 | NA | non-coding | upstream | 22980 | 54447143 ~ 54448615 (+) |
| G1880305 | NA | non-coding | upstream | 71237 | 54386102 ~ 54400358 (+) |
| G1880227 | NA | non-coding | upstream | 98981 | 54368187 ~ 54372614 (+) |
| G1880355 | NA | non-coding | downstream | 49971 | 54522950 ~ 54523556 (+) |
| G1880358 | NA | non-coding | downstream | 53389 | 54526368 ~ 54526784 (+) |
| G1880999 | perp | non-coding | downstream | 161905 | 54634884 ~ 54637087 (+) |
| G1881018 | NA | non-coding | downstream | 180445 | 54653424 ~ 54653661 (+) |
| G1881020 | NA | non-coding | downstream | 182376 | 54655355 ~ 54656212 (+) |
| G1879958 | NA | other | upstream | 615865 | 53851671 ~ 53855730 (+) |
| LOC118943904 | NA | other | upstream | 1071308 | 53398184 ~ 53400297 (+) |
| G1879582 | NA | other | upstream | 1093409 | 53377810 ~ 53378186 (+) |
| G1878894 | LOC106610502 | other | upstream | 1610960 | 52857868 ~ 52860635 (+) |
| G1878893 | NA | other | upstream | 1634961 | 52825488 ~ 52836634 (+) |
| G1881371 | NA | other | downstream | 529803 | 55002782 ~ 55003672 (+) |
| G1882830 | NA | other | downstream | 2056816 | 56529795 ~ 56538483 (+) |
| G1882831 | NA | other | downstream | 2060638 | 56533617 ~ 56543256 (+) |
| LOC110503001 | LOC106611028 | other | downstream | 2200269 | 56613066 ~ 56727194 (+) |
| G1883457 | NA | other | downstream | 2539058 | 57012037 ~ 57013218 (+) |
