Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118943891 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 54950534 ~ 54962738 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | name | namespace |
|---|---|---|
| GO:0016310 | phosphorylation | biological_process |
| GO:0000166 | nucleotide binding | molecular_function |
| GO:0004672 | protein kinase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005039219.1 | True | 318 | mRNA | 0.42 | 3 | 54950534 | 54962738 |
54,944,000
54,946,000
54,948,000
54,950,000
54,952,000
54,954,000
54,956,000
54,958,000
54,958,000
54,960,000
54,962,000
54,964,000
54,966,000
54,968,000
54,970,000
54,972,000
NC_048587.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502989 | LOC106610853 | coding | upstream | 222410 | 54694875 ~ 54728124 (+) |
| LOC110502983 | LOC106610821 | coding | upstream | 340173 | 54593361 ~ 54610361 (+) |
| si:ch73-52p7.1 | NA | coding | upstream | 477555 | 54471595 ~ 54472979 (+) |
| LOC110502981 | LOC106610814 | coding | upstream | 488128 | 54428818 ~ 54462406 (+) |
| LOC110502979 | LOC106610787 | coding | upstream | 588113 | 54329710 ~ 54362634 (+) |
| LOC110502992 | LOC106610889 | coding | downstream | 108450 | 55071188 ~ 55169539 (+) |
| dync2li1 | dync2li1 | coding | downstream | 210305 | 55173043 ~ 55182204 (+) |
| LOC110502997 | LOC106610965 | coding | downstream | 972467 | 55935205 ~ 55938585 (+) |
| LOC110502999 | NA | coding | downstream | 1022805 | 55985543 ~ 56041354 (+) |
| LOC110503000 | prkce | coding | downstream | 1348902 | 56311640 ~ 56610758 (+) |
| G1881304 | NA | non-coding | upstream | 2317 | 54947982 ~ 54948217 (+) |
| G1881296 | NA | non-coding | upstream | 7668 | 54942628 ~ 54942866 (+) |
| G1881289 | NA | non-coding | upstream | 11971 | 54937836 ~ 54938563 (+) |
| G1881276 | NA | non-coding | upstream | 30483 | 54919736 ~ 54920051 (+) |
| G1881269 | NA | non-coding | upstream | 44799 | 54905497 ~ 54905735 (+) |
| G1881344 | NA | non-coding | downstream | 15082 | 54977820 ~ 54978044 (+) |
| G1881369 | NA | non-coding | downstream | 38116 | 55000854 ~ 55042043 (+) |
| G1881412 | NA | non-coding | downstream | 106174 | 55068912 ~ 55069445 (+) |
| G1881475 | NA | non-coding | downstream | 129093 | 55091831 ~ 55092072 (+) |
| G1881476 | NA | non-coding | downstream | 129595 | 55092333 ~ 55092534 (+) |
| G1879958 | NA | other | upstream | 1094804 | 53851671 ~ 53855730 (+) |
| LOC118943904 | NA | other | upstream | 1550247 | 53398184 ~ 53400297 (+) |
| G1879582 | NA | other | upstream | 1572348 | 53377810 ~ 53378186 (+) |
| G1878894 | LOC106610502 | other | upstream | 2089899 | 52857868 ~ 52860635 (+) |
| G1878893 | NA | other | upstream | 2113900 | 52825488 ~ 52836634 (+) |
| G1881371 | NA | other | downstream | 40044 | 55002782 ~ 55003672 (+) |
| G1882830 | NA | other | downstream | 1567057 | 56529795 ~ 56538483 (+) |
| G1882831 | NA | other | downstream | 1570879 | 56533617 ~ 56543256 (+) |
| LOC110503001 | LOC106611028 | other | downstream | 1710510 | 56613066 ~ 56727194 (+) |
| G1883457 | NA | other | downstream | 2049299 | 57012037 ~ 57013218 (+) |
