Item | Value |
---|---|
gene id | LOC110502992 |
gene name | LOC106610889 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048587.1 |
NCBI id | CM023241.2 |
chromosome length | 62880378 |
location | 55071188 ~ 55169539 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
centrosomal protein of 170 kDa-like |
id | description |
---|---|
K16463 | CEP170; centrosomal protein CEP170 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036960826.1 | False | 6708 | mRNA | 0.52 | 18 | 55071188 | 55169539 |
XM_021581356.2 | False | 6839 | mRNA | 0.52 | 19 | 55071191 | 55169539 |
XM_021581355.2 | False | 6707 | mRNA | 0.52 | 18 | 55071192 | 55169539 |
XM_036960827.1 | True | 6565 | mRNA | 0.52 | 17 | 55071194 | 55169539 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC118943891 | NA | coding | upstream | 108450 | 54950534 ~ 54962738 (+) |
LOC110502989 | LOC106610853 | coding | upstream | 343064 | 54694875 ~ 54728124 (+) |
LOC110502983 | LOC106610821 | coding | upstream | 460827 | 54593361 ~ 54610361 (+) |
si:ch73-52p7.1 | NA | coding | upstream | 598209 | 54471595 ~ 54472979 (+) |
LOC110502981 | LOC106610814 | coding | upstream | 608782 | 54428818 ~ 54462406 (+) |
dync2li1 | dync2li1 | coding | downstream | 3504 | 55173043 ~ 55182204 (+) |
LOC110502997 | LOC106610965 | coding | downstream | 765666 | 55935205 ~ 55938585 (+) |
LOC110502999 | NA | coding | downstream | 816004 | 55985543 ~ 56041354 (+) |
LOC110503000 | prkce | coding | downstream | 1142101 | 56311640 ~ 56610758 (+) |
LOC110503001 | LOC106611028 | coding | downstream | 1443527 | 56613066 ~ 56727194 (+) |
G1881412 | NA | non-coding | upstream | 1743 | 55068912 ~ 55069445 (+) |
G1881369 | NA | non-coding | upstream | 29145 | 55000854 ~ 55042043 (+) |
G1881344 | NA | non-coding | upstream | 93144 | 54977820 ~ 54978044 (+) |
G1881311 | NA | non-coding | upstream | 118414 | 54952549 ~ 54952774 (+) |
G1881304 | NA | non-coding | upstream | 122971 | 54947982 ~ 54948217 (+) |
G1881535 | NA | non-coding | downstream | 47691 | 55217230 ~ 55218593 (+) |
G1881672 | NA | non-coding | downstream | 86570 | 55256109 ~ 55256354 (+) |
G1881692 | NA | non-coding | downstream | 105378 | 55274917 ~ 55275121 (+) |
G1881693 | NA | non-coding | downstream | 106636 | 55276175 ~ 55276403 (+) |
G1881698 | NA | non-coding | downstream | 116367 | 55285906 ~ 55286186 (+) |
G1881371 | NA | other | upstream | 67516 | 55002782 ~ 55003672 (+) |
G1879958 | NA | other | upstream | 1215458 | 53851671 ~ 53855730 (+) |
LOC118943904 | NA | other | upstream | 1670901 | 53398184 ~ 53400297 (+) |
G1879582 | NA | other | upstream | 1693002 | 53377810 ~ 53378186 (+) |
G1878894 | LOC106610502 | other | upstream | 2210553 | 52857868 ~ 52860635 (+) |
G1882830 | NA | other | downstream | 1360256 | 56529795 ~ 56538483 (+) |
G1882831 | NA | other | downstream | 1364078 | 56533617 ~ 56543256 (+) |
G1883457 | NA | other | downstream | 1842498 | 57012037 ~ 57013218 (+) |
G1885587 | NA | other | downstream | 3692675 | 58862214 ~ 58864502 (+) |