Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110502999 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 55985543 ~ 56041354 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002470412.2 | False | 1580 | mRNA | 0.43 | 4 | 55985543 | 56041354 |
| TU2153463 | True | 200 | lncRNA | 0.52 | 3 | 55985691 | 56038376 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502997 | LOC106610965 | coding | upstream | 46958 | 55935205 ~ 55938585 (+) |
| dync2li1 | dync2li1 | coding | upstream | 803339 | 55173043 ~ 55182204 (+) |
| LOC110502992 | LOC106610889 | coding | upstream | 816004 | 55071188 ~ 55169539 (+) |
| LOC118943891 | NA | coding | upstream | 1022805 | 54950534 ~ 54962738 (+) |
| LOC110502989 | LOC106610853 | coding | upstream | 1257419 | 54694875 ~ 54728124 (+) |
| LOC110503000 | prkce | coding | downstream | 270286 | 56311640 ~ 56610758 (+) |
| LOC110503001 | LOC106611028 | coding | downstream | 571712 | 56613066 ~ 56727194 (+) |
| LOC118943924 | NA | coding | downstream | 661377 | 56701366 ~ 56709966 (+) |
| LOC110503003 | LOC106611055 | coding | downstream | 771050 | 56812404 ~ 56828732 (+) |
| LOC110503004 | LOC106611018 | coding | downstream | 787702 | 56829056 ~ 56843475 (+) |
| G1882385 | NA | non-coding | upstream | 45027 | 55940288 ~ 55940516 (+) |
| G1882369 | NA | non-coding | upstream | 56859 | 55928291 ~ 55928684 (+) |
| G1882367 | NA | non-coding | upstream | 57934 | 55927376 ~ 55927609 (+) |
| G1882363 | NA | non-coding | upstream | 60385 | 55924840 ~ 55925158 (+) |
| G1882350 | NA | non-coding | upstream | 67022 | 55918315 ~ 55918521 (+) |
| G1882477 | NA | non-coding | downstream | 12646 | 56054000 ~ 56054416 (+) |
| G1882601 | NA | non-coding | downstream | 77286 | 56118640 ~ 56118873 (+) |
| G1882722 | NA | non-coding | downstream | 232297 | 56273651 ~ 56273861 (+) |
| G1882750 | NA | non-coding | downstream | 282331 | 56323685 ~ 56324052 (+) |
| G1882760 | NA | non-coding | downstream | 305812 | 56347166 ~ 56347423 (+) |
| G1881371 | NA | other | upstream | 981871 | 55002782 ~ 55003672 (+) |
| G1879958 | NA | other | upstream | 2129813 | 53851671 ~ 53855730 (+) |
| LOC118943904 | NA | other | upstream | 2585256 | 53398184 ~ 53400297 (+) |
| G1879582 | NA | other | upstream | 2607357 | 53377810 ~ 53378186 (+) |
| G1878894 | LOC106610502 | other | upstream | 3124908 | 52857868 ~ 52860635 (+) |
| G1882830 | NA | other | downstream | 488441 | 56529795 ~ 56538483 (+) |
| G1882831 | NA | other | downstream | 492263 | 56533617 ~ 56543256 (+) |
| G1883457 | NA | other | downstream | 970683 | 57012037 ~ 57013218 (+) |
| G1885587 | NA | other | downstream | 2820860 | 58862214 ~ 58864502 (+) |
