Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110503000 |
| gene name | prkce |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 56311640 ~ 56610758 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| prkce | Enables enzyme activator activity; enzyme binding activity; and protein kinase C activity. Involved in several processes, including peptidyl-serine phosphorylation; positive regulation of cellular glucuronidation; and positive regulation of epithelial cell migration. Located in several cellular components, including cytosol; endoplasmic reticulum; and intermediate filament cytoskeleton. |
| description |
|---|
| protein kinase C epsilon type |
| id | description |
|---|---|
| K18050 | PRKCE; novel protein kinase C epsilon type |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036960862.1 | True | 7792 | mRNA | 0.44 | 15 | 56311640 | 56610758 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502999 | NA | coding | upstream | 270286 | 55985543 ~ 56041354 (+) |
| LOC110502997 | LOC106610965 | coding | upstream | 373055 | 55935205 ~ 55938585 (+) |
| dync2li1 | dync2li1 | coding | upstream | 1129436 | 55173043 ~ 55182204 (+) |
| LOC110502992 | LOC106610889 | coding | upstream | 1142101 | 55071188 ~ 55169539 (+) |
| LOC118943891 | NA | coding | upstream | 1348902 | 54950534 ~ 54962738 (+) |
| LOC110503001 | LOC106611028 | coding | downstream | 2308 | 56613066 ~ 56727194 (+) |
| LOC118943924 | NA | coding | downstream | 91973 | 56701366 ~ 56709966 (+) |
| LOC110503003 | LOC106611055 | coding | downstream | 201646 | 56812404 ~ 56828732 (+) |
| LOC110503004 | LOC106611018 | coding | downstream | 218298 | 56829056 ~ 56843475 (+) |
| LOC118943926 | NA | coding | downstream | 768371 | 57379129 ~ 57399437 (+) |
| G1882722 | NA | non-coding | upstream | 37779 | 56273651 ~ 56273861 (+) |
| G1882601 | NA | non-coding | upstream | 192767 | 56118640 ~ 56118873 (+) |
| G1882477 | NA | non-coding | upstream | 257224 | 56054000 ~ 56054416 (+) |
| G1882385 | NA | non-coding | upstream | 371124 | 55940288 ~ 55940516 (+) |
| G1882693 | NA | non-coding | downstream | 36413 | 56647171 ~ 56647988 (+) |
| G1882883 | NA | non-coding | downstream | 60702 | 56671460 ~ 56671845 (+) |
| G1882884 | NA | non-coding | downstream | 61803 | 56672561 ~ 56672944 (+) |
| G1882891 | NA | non-coding | downstream | 84008 | 56694766 ~ 56695155 (+) |
| G1881371 | NA | other | upstream | 1307968 | 55002782 ~ 55003672 (+) |
| G1879958 | NA | other | upstream | 2455910 | 53851671 ~ 53855730 (+) |
| LOC118943904 | NA | other | upstream | 2911353 | 53398184 ~ 53400297 (+) |
| G1879582 | NA | other | upstream | 2933454 | 53377810 ~ 53378186 (+) |
| G1878894 | LOC106610502 | other | upstream | 3451005 | 52857868 ~ 52860635 (+) |
| G1883457 | NA | other | downstream | 401279 | 57012037 ~ 57013218 (+) |
| G1885587 | NA | other | downstream | 2251456 | 58862214 ~ 58864502 (+) |
| G1886557 | NA | other | downstream | 3113506 | 59724264 ~ 59736661 (+) |
| G1886558 | NA | other | downstream | 3116988 | 59727746 ~ 59736471 (+) |
