LOC110503000 (prkce)


Basic Information

Item Value
gene id LOC110503000
gene name prkce
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 56311640 ~ 56610758 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036960862.1
TCCCTGTATCTGTCACTTGAGCCCTTGGATGCGTCTCTGTCCTGACAGCCTGGTCGACTCGCCTACACTGACAGTTGTGTTGCACTCCCCCATCTGGCATAGACAAGACGCAGCGCGCCTCAGAGAAAGAAACTGACGTGTTTTGCGCATTTCCTGCACCAGTGTTTAGACTGTTGGAGGAGAAAAGGGAGGTGTGCAGGAAACCAAAAACAGCAACGGCGAGAAAACAGCCTGGGAGTTTAAGGAGCAAACTGAAACCAAGTACAGCAACGGCAAGAAAACCGTCTGGGAGTATAAGGAACGAACAGAAACCAAGAAAACCACAACAGAGTCGACCTGCAACTATACACTGCTTGAGCAATTCACAAGTCGGGTAGCCGGTTTGGGAAACATCCCAAATGCTCGGCGAGGAGGCAGCAGTCTCTTCCAACGGTGGAATACGAGTGTTTCCAAAGCCTAGTGGAGTTGCCGAGGATAGTTTTGATAGATTTTGCTCTGTCGTGTTGCGGTTTGGGTAGGCTGTTGACATTCCAACTGCTGCATAGTCGTATTTTTCCTTCTTATAAGCTTCTCAAGACGTGTATTTATTCTATTCAAAAGAAAGGCTGTGTCTGGTTGAACGCCAAATGTGGATTATCATTGGGAAAACCAAGACTGTTAGAGAGCAAAAACGAGACAATTTACTCTCACTAGACTGTTTCGGGAGGACTGATTTGCATCCGATTGGTAGTCTATGTGTGTACTAGAGTGAGACGGGACAGCATTTCCCCGTTACATTTAAGTCTCAACCCATTCAAACCGTGGTCTTCATTTGAGGATTCAAACAACACATAAAACTAGGACACATGATTTATGACCAATTGAAGTGTTTGGGTTAAAGGAATTTATTGTAAACAACCAATCTTCTTCCAAGTCCTATTGAGGAGGATTACATCACCGCCATGGTGGTTTTCAATGGGTTATTGAAGATCAGGATTTGTGAGGCGTTGGACTTGAAACCGACAGCTTGGTCTCTCAGACATGCGGTTGGCCCAAAGACCCAGACTTTTCTCTTAGACACATACATTGCACTAAACGTGGATGACTCGCGTGTGGGCCAAACTTCCACCAAACAGAAAACCAACAGCCCTGCGTGGAACGATGAGTTCGTTACGGAGGTGCATAACGGAAGGAAAATCGAACTGTCGGTGTTTCACGACGCGCCAATTGGATATGACGATTTCGTAGCCAACTGCATCATACAGTTCGAAGATATATTGCAGAATGGCAGTAAGCACTACGAGGAATGGATTGACTTGGAGCCTGAGGGGAAGGTGTACGTCATCATGGACCTGTCTGGATCCTCTAGTGAAGCTCCAGGCTCCGGTGAGAATGCTGAGGAGCGTGTGTTTCGGGAGCGCATGCGGCCTAGGAAGAGGCAGGGTGCCGTACGAAGGAGGGTCCATCAAGTCAACGGACACAAGTTCATGGCCACCTACCTGCGGCAGCCTACCTACTGCTCCCACTGCAGAGACTTTAtatggGGTGTGATTGGAAAACAGGGTTACCAGTGTCAAGTGTGCACGTGTGTAGTCCATAAGCGCTGCCACGAGCTCATCATAACAAAATGTGCTGGGATGAAGAAAGACAAAGAGGACACCACACCAGAGGAGGTTGGATCCCAGCGGTTCAGCGTTAATATGCCTCATAAGTTTGGTATTCACAACTTCAAAGTCCTAACCTTCTGTGACCACTGTGGATCGCTACTGTGGGGCCTGCTCAGACAAGGGCTGCAATGCAAAGtctgtaaggTGAATGTACACAGACGCTGTGAAAGTAACGTGGCTCCTAACTGTGGGGTGGACGCGAGGGGCATCGCcaaggttctgtcagacctgggggTCACACCAGACAAGATCTCCAGCAGTGCCCAGAGGAGGAAAAAGATAACCCAAGAACCCCAGCAGCCGTTACCATGTACCCCCCAGGCAGAGGAGGACCGATCCAAATCAGCCCCCACCTCCCCATGTgaccaagACCTGAAAGAGTTGGAGAACATACGCAAGGCGCTGTCGTTTGACCAACGTGGACAGGAACACAAGTCggcctcatcctcttcttccaagGTGGCGGTGGGCTCAGAGGGGGGCGAGGCCCGGGAGAATGGAGAGCTCAAGACAGTCCAGACCAAGAGGATGACGCTGCAGAACTTCCTCTTCATCAAGGTCCTGGGCAAAGGCAGCTTCGGAAAGGTGATGCTGGCTGAGCTGAAAGGGACAGATGAGGTGTATGCTGTGAAGGTGTTGAAGAAAGACGTGATCCTGCAGGATGATGATGTGGACTGTACCCTGACAGAGAAACGCATATTGGCCCTGGCTAGGAAACACCCCTACCTGACCCAGCTCTTCTGTTGCTTCCAGACTAAGgACCGTCTGTTCTTTGTGATGGAGTATGTAAATGGAGGAGACCTGATGTTTCAGATCCAGCGCTCCAGGAAGTTTGACGAGACGCGCTCTCGCTTCTATGCCGCCGAAGTCACCTCTGCCCTCATGTTTCTTCACCAACATGGAGTAATCTACagagatctgAAACTGGATAACATTCTGCTGGATGCACAAGGCCACTGTAAACTGGCTGACTTTGGCATGTGTAAGGAGGGGATCCTCAATggagtcaccaccaccaccttctgTGGGACCCCAGACTACATCGCTCCGGAGATCCTACAGGAGCTAGAATATGGCCCCTCTGTGGACTGGTGGGCTCTGGGGGTGCTTATGTACGAGATGATGGCTGGCCAGCCCCCCTTTGAGGCAGACAATGAGGATGACCTGTTTGAGTCCATTCTCCACGATGATGTCCTCTACCCAGTGTGGCTAAGCAAGGAGGCAGTCTCCATCCTCAAAGCGTTCATGACGAAGAGTCCAAACAAGCGTCTGGGCTGTGTGATCACCCAGGGCTTGGAGGAGGCCATCAAGGTGCATCCCTTCTTCAAGGATATGGACTGGGTTCTGCTGGAGCAGAAGAGGGTCAAACCACCCTTCAAACCTCGCATTAAAACCAAAAGGGACGTGAACAACTTTGACCAGGACTTCACTCGCGAGGAGCCTGTCCTCACCCCTGTAGAAGACGCCATTATTAAGCAGATCAACCAAGACGAGTTCAAGGGTTTCTCCTACTTTGGAGGGGAGGAGACTCTGTCCTCACCCCTGTAGAAGACGCCATTATTAAGCAGATCAACCAAGATGAGTTCAAGGGTTTCTCCTACTTTGGAGGGGAGGAGAATCTGTCCTAAGGCctgcacacacaccaacacacacacacacaccaacacacacacacacacacacacaaacaaacacgtatagacacacatacatgcaggaacactgacatacacacaaaTTTaagaacacacatacaaacatacatacatacatacatgcaaaCCCATGTATTTTCTCCCATACAGAATTATAAAATACACACAGAGTAAATTATTACTTTCACACACTCATATAAAACTCCGGCCATTAGGGCCTCAGATTAGTACCAACTTCAAAACCTAAACCAGAGCATCTACAGCGCTCTACCAgtatctgtctgtatgtctgtctgtccatccgtgCATGCTTTCTAAGTTACAAACCAATGTAATTCAAGAGTAGGTCAGATAGGAAGCCCATCTGCTTTATTATCAAGGTCCTATTGGCTGGTCCAGATCAGAGTGGTGGATCAAACCACACTCTTTGTGGTGGAGGGTGGCCCTAGGATTGGCCCCCTGACACTGAATATAGCCTGGCCCTTGCCCCACTGGACCGGGCTGATAACAGTGATGAAAGCTCCTCACAGTCCTGCCACAGATTGTCACAAGGCCCTTTCCAGTGGACTATGAAATGTACAGGGAATGTTTATGTGACGGTGTCAACTTTTTGTCTATATAAGGATTTAAAGGTCAGGGGTTATGTGTGCTTTGGGCAGGGGTCTTGTTCGACATGGTCTCCTTACAATAGGTCAGACTTTCAACTGTTTCGTCAACCATCCTAGTTCCTCAGTGAGTATATGATACTGAAATAATTATGTTATTAAATTAATCTGTAATTTCTTAAACTGTCCTGTACATTTCTCATTGTACTAGAATGTCCTCCTTCTCTGCCATGTTTAAACTGGATGTACTAGAATGACCTCCTTCTCTGCCATGTTTAAACTGGATGTACTAGAATGTCCTCCACCTCTGCCATGTTTAAACTGGATGTACTAGAATGTCCTCCTCCTCTGCCATGTTTAAACTGGATGCACTAGAATGTCCTCCTCTGCCATGtttaaatgcaaaaaaaaaaacgaatccaTAGAACCAATGATTGTATTTAAAAAAGCTAAAACCAATTGGTTCACAGTGTCAATAAAAAAGAGAAGCCTGTTTCAAAGTTTCCTCAAGATCAAAACGACGGCAGAATTAGAACAAGTCCATGTACAGTACATCAAATGCCCATTGTGTGTAGCTGCAGATCAGTTACATGTTGTAGATATGCCCACAGTGTTATGGTAGTCTAGCTTCATGTATTCCAAATGAATGTCATGGGTTTCAATGTGGACAAATGTGCTTGTATGCATGAGTGATGGTGGGGATGCAACTGAATGTATCgggtctgtttgtgtgtatgtgtgtgcgtgtgcgtgtgtgtgtgtcagtaagtATACTGCACGTACGCTAGTTTGTGTGAGTCTGTTTGTGCGTGTGCATGAGAAGGGCCCTCTTGAAGATTTAACATTTCATTGTGTCTGTTTTATTTTCTTGTGTTTTATTTCAttgtgtgttttattttattgtgtgttttattttattgtgtgttttatttcattgtgttttattttattgtgtgttttatttcattgtgtgttttattttattgtgtgTTTTATTTTGTCGTGATTTTACTGGATTGTCTTGTTGCTCAGTGTCTGAAATCCTGGATTTCCCTGCTATGCAACAAGACTCACAATCATGTGAGGGAAGGCATCACCAGATAGCCATGTCTTTCCCTCTGTACAGACCACCTTGCATATAGAAGCCTGTGGACTTCTTGGAGAAATAGAGGTATCATCTATTGCATGGTTATGCATATGATGTTATTGTGTATTACTAGAATATGAAAAAGTGACAATGTCCATGTGCAATattctatgtctgtctgtctgtttttggtTTCCTTTGCTTTCTTGCCAGGTGTCTTCGCTGTTCATCCTCCCACTGactctttgctgttgttctgtatGGTTTTGACAGTGTATGCATGGCTGTTTTCATTTGCCTGTCGTTAACCCCATTGATAGCCATGTCTATGTGCTTCCTTCAGAGTGTTCCATCAAACCACCTCACCAcccctctccctgccctctctcaaCTCTTTTGAAGAAAGGTTGACATTTCCTATAGCATATCTCtttaaaaatgtaaacattttctATAGCATACTTctttaaaaaggtcaacattTCCTGTAGCATATCTCTTTTAAAAAAGGTCAACATTTCCTATAGCATATCTCTTTAAAAAGTCAACATTTCCTGTAGCATCTCTTTAAAAAAGGTCAACATTTCCTACAGCATCTCTTTTTAAATAAGGTCAACATTTCCTATAGCATATCTCTTTAAAAAGTAAACATTTCATGTAGCATATCTCTTTAAAAAGTCAACATTTCCTACAGCATCTCTTTTTAAATAAGGTCAACATTTCCTATAGCATATCTCTTTAAAAAGTAAACATTTCATGTAGCATATCTCTTTAAAAAGTCAACATTTCCTGTAGCATATCTCTTTAAAAAAGGTCAACATTTCCTACAGCATCTCTTTTTAAATAAGGTCAACATTTCCTGTAGCATatctctttaaaaaaaaggtcAACATTTCCTGTAGCATATCTCTTTTAAAAAAGGTCCACATTTCCTGTAGCATATCTCTTTAGAACATTAATATTACCAAAGGTAGTAAATCTATTGGATTCATTAAGCTTATAGAAACCATCGACCTTCTTATTGCATTCAAGCCAAATAACTCTCTGGCCAAGATACAAGATATATAAGATACAAGATATATAAGATGTATGTGATATTGTAAGCCTACACCAAATCAAGGTAAAGTCAAATCTACTGTCATATTCTGTCAGTAGAACACAAAAAGAACAATGTTGGTTTGTTATGATATTGCAAGTTGTACATTCCATTTTAGAGTAGAAACTTGAAAGTAACTTTCAAATGTTGGATTCATAACAGTAGGACTATTTGCAATTGAAGAGGTAGTGTAGTAGTGATAGTATGACTACtgtagaagtagcagtagcagttgttattgtagtagtagtagtagtagttattgTAGTATTATTAGTAGCATGTATAACAGTGCTAGTGCTAGTAGTAGCTACTCTGCTATGGGGAGCAGGAGTAACTGTAGCAACAGTGGTTGTAGCAGCGTTAATAGGTGACGGTATCATGGAATCAACTGTCAAAGCAATACTGATGCCCCTGCTCCACACACACCACTGCATGAAGGCCGCTCATACACCCAAAGCAATACTGATGCCCCTGCTCCACACACACCACTGCATGAAGGCCGCTCATACACCCAAAGCAATACTGATGCCCCTGCTCCACACACACCACTGCATGAAGGCCGCTCATACACCCAAAGCAATACTGATGCCCCTGCTCCACACACACCACTGCATGAAGGCAGCTCATACACCCAAAGCAATACTGATGCCCCTGccccacacacaccactgcaTGAAGGCCGCTCATACACCCAAAGCAATACTGATGCCCCTGccccacacacaccactgcaTGAAGGCCGCTCATACACCCAAAGCAATACTGATGCCCCTGccccacacacaccactgcaTGAAGGCCGCTCATACACCCAAAGCAATACTGATGCCCCTGccccacacacaccactgcaTGAAGGCCGCTCATACACCCAAAGCAACCACACCTTTGACACAGCTGCACCTATGTCAATTAATCACATGACCCCCAACATGAGAACAGTGTTAAAGAGAGGAcatttgtgttttgttttgtaaGATGGCAGACGCACGTCCTACTCCGACCCATACGGACGGTGTCCCTAGAGGTCCAAAATGCTCCAAGCCAAATCCTTAACTCCAACTTTCTATGGTCCTTTTATTGTGTACTTTTTAAACTGTTTgtaaaggaagaaaaaaaactcaTAGGAAACTAATTTGTCTGTTGTAAGGCCAGTGAAGCAGATGAATGAGTACAATGTACATTGTTGAAGAAGTACATCTGGCGAAATATTATGTGTTTGTTACATACAGTAGAATAAAAGACACAGCGGTGGGCCACATGCATCATATTACTGTATGTACCTCTGTACATGTAGGGTTTCCTAATGGAGACTACTTCTGTAATAAAAGCATGCTCATTTAAGAATATCTATTGGAATGTCTTTTTAATCCAGGACGACACTGATTCTGGGTCTGGGAATCTGGACAATAGTATTGGATTTCTGGTTTCTGTATTGTGAAGCTTTCTATGTACAGTTTGTCACCTGGCTGTTTTATTTTGAAGTCCTTTGGCATTCATTACTGTATGTAATTGTAAGCATTTTGGCTGTGTGCCAAAAGGATGTGAATGTGTACTGTTGGTTTTTGGAACTTATTAAATATAATGATGTCAAATTAAAGAGTGGATTTGCTTGTTTTAGGGCTAATTTTTGTTCAGTGATAATACAAATGTATGCAAAAGAGACCCAGGTCTCTGCTAAAATAAAGGTCAAAAAGCTC

Function

symbol description
prkce Enables enzyme activator activity; enzyme binding activity; and protein kinase C activity. Involved in several processes, including peptidyl-serine phosphorylation; positive regulation of cellular glucuronidation; and positive regulation of epithelial cell migration. Located in several cellular components, including cytosol; endoplasmic reticulum; and intermediate filament cytoskeleton.

NR:

description
protein kinase C epsilon type

GO: NA

KEGG:

id description
K18050 PRKCE; novel protein kinase C epsilon type

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036960862.1 True 7792 mRNA 0.44 15 56311640 56610758

Neighbor

gene id symbol gene type direction distance location
LOC110502999 NA coding upstream 270286 55985543 ~ 56041354 (+)
LOC110502997 LOC106610965 coding upstream 373055 55935205 ~ 55938585 (+)
dync2li1 dync2li1 coding upstream 1129436 55173043 ~ 55182204 (+)
LOC110502992 LOC106610889 coding upstream 1142101 55071188 ~ 55169539 (+)
LOC118943891 NA coding upstream 1348902 54950534 ~ 54962738 (+)
LOC110503001 LOC106611028 coding downstream 2308 56613066 ~ 56727194 (+)
LOC118943924 NA coding downstream 91973 56701366 ~ 56709966 (+)
LOC110503003 LOC106611055 coding downstream 201646 56812404 ~ 56828732 (+)
LOC110503004 LOC106611018 coding downstream 218298 56829056 ~ 56843475 (+)
LOC118943926 NA coding downstream 768371 57379129 ~ 57399437 (+)
G1882722 NA non-coding upstream 37779 56273651 ~ 56273861 (+)
G1882601 NA non-coding upstream 192767 56118640 ~ 56118873 (+)
G1882477 NA non-coding upstream 257224 56054000 ~ 56054416 (+)
G1882385 NA non-coding upstream 371124 55940288 ~ 55940516 (+)
G1882693 NA non-coding downstream 36413 56647171 ~ 56647988 (+)
G1882883 NA non-coding downstream 60702 56671460 ~ 56671845 (+)
G1882884 NA non-coding downstream 61803 56672561 ~ 56672944 (+)
G1882891 NA non-coding downstream 84008 56694766 ~ 56695155 (+)
G1881371 NA other upstream 1307968 55002782 ~ 55003672 (+)
G1879958 NA other upstream 2455910 53851671 ~ 53855730 (+)
LOC118943904 NA other upstream 2911353 53398184 ~ 53400297 (+)
G1879582 NA other upstream 2933454 53377810 ~ 53378186 (+)
G1878894 LOC106610502 other upstream 3451005 52857868 ~ 52860635 (+)
G1883457 NA other downstream 401279 57012037 ~ 57013218 (+)
G1885587 NA other downstream 2251456 58862214 ~ 58864502 (+)
G1886557 NA other downstream 3113506 59724264 ~ 59736661 (+)
G1886558 NA other downstream 3116988 59727746 ~ 59736471 (+)

Expression


Co-expression Network