Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118943924 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 56701366 ~ 56709966 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005039274.1 | False | 7157 | mRNA | 0.40 | 2 | 56702731 | 56709966 |
| TU2153712 | False | 8219 | lncRNA | 0.41 | 3 | 56701366 | 56709792 |
| TU2153710 | False | 7746 | lncRNA | 0.40 | 2 | 56701968 | 56709792 |
| TU2153713 | True | 7574 | lncRNA | 0.41 | 3 | 56701968 | 56709792 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503001 | LOC106611028 | coding | upstream | 1747 | 56613066 ~ 56727194 (+) |
| LOC110503000 | prkce | coding | upstream | 91973 | 56311640 ~ 56610758 (+) |
| LOC110502999 | NA | coding | upstream | 661377 | 55985543 ~ 56041354 (+) |
| LOC110502997 | LOC106610965 | coding | upstream | 764146 | 55935205 ~ 55938585 (+) |
| dync2li1 | dync2li1 | coding | upstream | 1520527 | 55173043 ~ 55182204 (+) |
| LOC110503003 | LOC106611055 | coding | downstream | 102438 | 56812404 ~ 56828732 (+) |
| LOC110503004 | LOC106611018 | coding | downstream | 119090 | 56829056 ~ 56843475 (+) |
| LOC118943926 | NA | coding | downstream | 669163 | 57379129 ~ 57399437 (+) |
| LOC110503012 | LOC106611138 | coding | downstream | 789728 | 57499694 ~ 57540368 (+) |
| LOC110503013 | NA | coding | downstream | 835309 | 57545275 ~ 57550796 (+) |
| G1882891 | NA | non-coding | upstream | 7576 | 56694766 ~ 56695155 (+) |
| G1882884 | NA | non-coding | upstream | 29787 | 56672561 ~ 56672944 (+) |
| G1882883 | NA | non-coding | upstream | 30886 | 56671460 ~ 56671845 (+) |
| G1882693 | NA | non-coding | upstream | 54743 | 56647171 ~ 56647988 (+) |
| G1882845 | NA | non-coding | upstream | 138225 | 56562702 ~ 56564506 (+) |
| G1882901 | NA | non-coding | downstream | 18284 | 56728250 ~ 56728466 (+) |
| G1882902 | NA | non-coding | downstream | 18657 | 56728623 ~ 56765655 (+) |
| G1883403 | NA | non-coding | downstream | 187116 | 56897082 ~ 56897577 (+) |
| G1883408 | NA | non-coding | downstream | 192191 | 56902157 ~ 56903028 (+) |
| G1883412 | NA | non-coding | downstream | 214341 | 56924307 ~ 56935226 (+) |
| G1882831 | NA | other | upstream | 159475 | 56533617 ~ 56543256 (+) |
| G1882830 | NA | other | upstream | 164248 | 56529795 ~ 56538483 (+) |
| G1881371 | NA | other | upstream | 1699059 | 55002782 ~ 55003672 (+) |
| G1879958 | NA | other | upstream | 2847001 | 53851671 ~ 53855730 (+) |
| LOC118943904 | NA | other | upstream | 3302444 | 53398184 ~ 53400297 (+) |
| G1883457 | NA | other | downstream | 302071 | 57012037 ~ 57013218 (+) |
| G1885587 | NA | other | downstream | 2152248 | 58862214 ~ 58864502 (+) |
| G1886557 | NA | other | downstream | 3014298 | 59724264 ~ 59736661 (+) |
| G1886558 | NA | other | downstream | 3017780 | 59727746 ~ 59736471 (+) |
| G1886560 | NA | other | downstream | 3039752 | 59749718 ~ 59786095 (+) |
