LOC110503003 (LOC106611055)


Basic Information

Item Value
gene id LOC110503003
gene name LOC106611055
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 56812404 ~ 56828732 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021581366.2
TGTGCTTAGCGTAGATAAGGAGGGTAAGCATTGAAGGGAAAGAAGAGTCCCCGCCCTAAAATGTGATCCTTCAAAAACCTCTAGTGACGATGTCACCAAAGAAAGTTTATCTTCGCCGTCCAGAGAAACGTAATTTCCAGATTCGCCATTCTGACAAACGTTATTTCCAGATTCGCGTCCAGAGAAACGTGATTTCCAGATCTCCAATCCTGGATCTTCTCCGAACGAAAACAGctggattacagactgggataaAATTAGTTAGTTAGTTTGTATTAATGATGTTGAGAATTATAACTATTTGTGGTAACGTGTCAGAGCGCTCCAAAATTACTTATAGATAAGTTTTTTTTATTGGAGAGGAGCTGGTAGCGGATCAATTCCCCGTGTGCGCGCACTGCACACTATTTACTGCGGCAAAAGAGTTGAATAAATTATCTCTATTGACTGTTTTACGTTCTACAAGTTTTTGCATCGTTTTGGGGAATCTGGCCAATGCTGAGCATCATGGGAGTCCCTATGTTTACCGTGTCTCTGGAGGACCTGGTCGTGGCCGAGGCACTGTCTCCCCCAGCATGCCAGGACGTCAGGTTCGCTCCACCCAGCCCACCGTACCTCCCGAGACCCTCATCATACCAGCCCACAGCACGAGGGTCCACCTCAGCCAGGACGACATCAAGAAGCTGAGGTTCAAGCCCACGGTGGGATCGGTGCACCTATCAGAGGGGCACAACACCAATTTCAACTGCTCCATCGAGGTCCCTGACAACCACCTGGACCTCACCGTGCTGTGGTGGAAGAACACCATGGAGCTGGCTGAAAACCTGCAGGTGGTCATCAACGAATTACAGACCGTCACACACGGGTTCATGACTCTGCTGTTCACTGTCAGCATAACTCGTGTGCAAAGAGCTGACGCTGGGGATTACCGCTGTAGACTGAGAGTCCGTGACATAGAGATAGAGTCCCAGCCTATCAGCATTCAGGTCGAAGgtctACCAATGTTCACTAGACACCCAGATGACATGAACGTAACTTGTAACAGCCCCTTTAACCTGTCATGTGAAGCGGTGGGTCCCCCGACTCCTATCACAATCCGTTGGCTACGCAACGGAGTTCCTGAGATGGGGTACCTTACCTCCCGCAGCAACTACACTGTACcagGTATGAGATTATGTACAGCTGTTGGCGTACTGACCCCCTGGACCGCCCCATCTTCACTCCGGTAAGAGAACTGTTGGAGAAGCTGACAGAGAAACTTCCAGAGGTTTCTACCAGCAAAGAGAACatcatctacatcaacaccagtTTCGCCGAGGAGGAGCATGGGGTTTGTGCAGACCCCCACCTAGATTTGCCGCTTTTTAGGACCTCCCCTTCCTGCAGTCATAACAACCAATTCAGCTCCTCCCCTTCCTGTTGCCACCCATTTAGCTCCTCCCCTTCCTGCAGCCAGGC
>XM_021581365.2
GTGCTTAGCGTAGATAAGGAGGGTAAGCATTGAAGGGAAAGAAGAGTCCCCGCCCTAAAATGTGATCCTTCAAAAACCTCTAGTGACGATGTCACCAAAGAAAGTTTATCTTCGCCGTCCAGAGAAACGTAATTTCCAGATTCGCCATTCTGACAAACGTTATTTCCAGATTCGCGTCCAGAGAAACGTGATTTCCAGATCTCCAATCCTGGATCTTCTCCGAACGAAAACAGctggattacagactgggataaAATTAGTTAGTTAGTTTGTATTAATGATGTTGAGAATTATAACTATTTGTGGTAACGTGTCAGAGCGCTCCAAAATTACTTATAGATAAGTTTTTTTTATTGGAGAGGAGCTGGTAGCGGATCAATTCCCCGTGTGCGCGCACTGCACACTATTTACTGCGGCAAAAGAGTTGAATAAATTATCTCTATTGACTGTTTTACGTTCTACAAGTTTTTGCATCGTTTTGGGGAATCTGGCCAATGCTGAGCATCATGGGAGTCCCTATGTTTACCGTGTCTCTGGAGGACCTGGTCGTGGCCGAGGCACTGTCTCCCCCAGCATGCCAGGACGTCAGGTTCGCTCCACCCAGCCCACCGTACCTCCCGAGACCCTCATCATACCAGCCCACAGCACGAGGGTCCACCTCAGCCAGGACGACATCAAGAAGCTGAGGTTCAAGCCCACGGTGGGATCGGTGCACCTATCAGAGGGGCACAACACCAATTTCAACTGCTCCATCGAGGTCCCTGACAACCACCTGGACCTCACCGTGCTGTGGTGGAAGAACACCATGGAGCTGGCTGAAAACCTGCAGGTGGTCATCAACGAATTACAGACCGTCACACACGGGTTCATGACTCTGCTGTTCACTGTCAGCATAACTCGTGTGCAAAGAGCTGACGCTGGGGATTACCGCTGTAGACTGAGAGTCCGTGACATAGAGATAGAGTCCCAGCCTATCAGCATTCAGGTCGAAGgtctACCAATGTTCACTAGACACCCAGATGACATGAACGTAACTTGTAACAGCCCCTTTAACCTGTCATGTGAAGCGGTGGGTCCCCCGACTCCTATCACAATCCGTTGGCTACGCAACGGAGTTCCTGAGATGGGGTATGAGATTATGTACAGCTGTTGGCGTACTGACCCCCTGGACCGCCCCATCTTCACTCCGGTAAGAGAACTGTTGGAGAAGCTGACAGAGAAACTTCCAGAGGTTTCTACCAGCAAAGAGAACatcatctacatcaacaccagtTTCGCCGAGGAGGAGCATGGGGTTTGTGCAGACCCCCACCTAGATTTGCCGCTTTTTAGGACCTCCCCTTCCTGCAGTCATAACAACCAATTCAGCTCCTCCCCTTCCTGTTGCCACCCATTTAGCTCCTCCCCTTCCTGCAGCCAGGCGAGACCGGACCTCCCCCTTTTCAGTTCCTTCTCTTCCTGCAGTCAAAGTCAGAGACCAAATAACAGAGATATGGTGACAGCAGACATCCACGAGAGTAAGGAAGATGATCGTTACGTTGTTGTCATCTCTAATGCCAATCGGAGTAGAGACCCCGCTGTCGCCAAGAccgcagcaacagcagcagctgtGGACAGTGACACTCCCCCGTTCTCGAGGGAGGGCTTGGGTGGGGCTGTGCGTGGAACTACCTGTGACTCAGTGGGTGATGTCACTGGAATGGAGCAGCACGCGAGTGACACCACGCTGTTACTCTGAAGGGCATGGAACATTGGGACTAGAAATCCAGGGATTTGAAAGCAgaaaagaaaagctctctctcaggTGTCATATCTGATGATAATACACATCCTTCTGGTCTGCACTCTGATCTGTTGAGGACATTATAGGTATGATAATGACCCGGCCGGTGATGAGCACGATTACCGCATGATTACCGCCGGTAACGTGTCCGGCTCTGGACTCTATGCTACTGGGTTCGAATCATGCCTCGGAATATCATGCTACTCCTTCATTTTATTACAGTATGAAGAGATGTTACTGTGGATCATGAGCACATAGGCTTCCTGCTTGGTGCAGCATGTGCAGTCTTGAGTTGTCACCCTTCCAAGTCCTGTTTCACCAAGGATCTGCCCAGTTTCCATAGAAATTGAATACCTATCTATGATTCTGTCTTCTGGCATTATTAAAACAGTATTACAGGCTTGTCTATTCCCTAATGATTTGCATTGAAGTTATTCTGACCAGTTTTTCGGTGGATGTTTATACCTCAAATAGTTACCACTAGCTATCAGTGTGCAAGAGATGTACATAATATATTCTACATTTGCACATCTCTCTTATAGTATACAGCATTTCCAATGAGATAAGCTTTGCTCACAAATAAAATCAGTGTATCCCTAGCAAATAttttccctcctgcagcaaagcacccccacaacatgatgctgccacccctgtgcttcacggttgggatggtgttcttcggcttgcaagcctccccaaaaagtacgacctttgtccccatgtgcagttgcaaaccgtagtctggctttttttatggtggttttggagcagtggcttctttcttgctgagcggcctttgaggttaagtcgatataggacttgttttactgtggatatagatacttttgtacctgtttcctccagcatcttcacaaggtcctttgctgttgttctgggattgatttgcacttttcgcaccaaagcacgttcatctcttgATATTGAAAGCTGTGAACAAGACATAAATACGGCCAATCACTGTTCTAAATCAGTGTACTACACTTCCAACTAAATGCTTACATTCAGACTGTATGTAAATTGCCTTTTTATATATTGAAGTATTTTTTTAAGTGCCATTGTGTATATGAACTTTACCTACTAAGTGTATAGAGAGTATTGTGTACATATGTTTTATagtctgaaaaaaaaatctgttttggaTCTCTGAGGACCCTGTGCAGCCTTGAGGTACTCCACCAAGTTCAGGCTGTAGACCTTGGAATGTGCACAATATCTAATAGTTTCAATTAAAGATTTTAAAACAAGTA

Function

NR:

description
tyrosine-protein kinase Mer-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021581366.2 False 1458 mRNA 0.50 7 56812404 56827100
XM_021581365.2 True 3054 mRNA 0.46 7 56812405 56828732

Neighbor

gene id symbol gene type direction distance location
LOC118943924 NA coding upstream 102438 56701366 ~ 56709966 (+)
LOC110503001 LOC106611028 coding upstream 111420 56613066 ~ 56727194 (+)
LOC110503000 prkce coding upstream 201646 56311640 ~ 56610758 (+)
LOC110502999 NA coding upstream 771050 55985543 ~ 56041354 (+)
LOC110502997 LOC106610965 coding upstream 873819 55935205 ~ 55938585 (+)
LOC110503004 LOC106611018 coding downstream 324 56829056 ~ 56843475 (+)
LOC118943926 NA coding downstream 550397 57379129 ~ 57399437 (+)
LOC110503012 LOC106611138 coding downstream 670962 57499694 ~ 57540368 (+)
LOC110503013 NA coding downstream 716543 57545275 ~ 57550796 (+)
LOC110503040 LOC106579579 coding downstream 742014 57570746 ~ 57588495 (+)
G1882902 NA non-coding upstream 46749 56728623 ~ 56765655 (+)
G1882901 NA non-coding upstream 83938 56728250 ~ 56728466 (+)
G1882891 NA non-coding upstream 117249 56694766 ~ 56695155 (+)
G1882884 NA non-coding upstream 139460 56672561 ~ 56672944 (+)
G1883403 NA non-coding downstream 68350 56897082 ~ 56897577 (+)
G1883408 NA non-coding downstream 73425 56902157 ~ 56903028 (+)
G1883412 NA non-coding downstream 95575 56924307 ~ 56935226 (+)
G1883413 NA non-coding downstream 102546 56931278 ~ 56932341 (+)
G1883414 NA non-coding downstream 106699 56935431 ~ 56935773 (+)
G1882831 NA other upstream 269148 56533617 ~ 56543256 (+)
G1882830 NA other upstream 273921 56529795 ~ 56538483 (+)
G1881371 NA other upstream 1808732 55002782 ~ 55003672 (+)
G1879958 NA other upstream 2956674 53851671 ~ 53855730 (+)
G1883457 NA other downstream 183305 57012037 ~ 57013218 (+)
G1885587 NA other downstream 2033482 58862214 ~ 58864502 (+)
G1886557 NA other downstream 2895532 59724264 ~ 59736661 (+)
G1886558 NA other downstream 2899014 59727746 ~ 59736471 (+)
G1886560 NA other downstream 2920986 59749718 ~ 59786095 (+)

Expression


Co-expression Network