LOC110503005 (LOC106611007)


Basic Information

Item Value
gene id LOC110503005
gene name LOC106611007
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 56856580 ~ 56886643 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021581369.2
TGCCTGCTCTATTCTGCCGTTTGAGTCTGGGGATCGCGTCACAGCCTATGAGAAGGACAGAACATTGGAGAGAGTGACGCAAATGTGTTGTCGAGCGGTGGCAGGGATTATTCTTTCATTATCCATTTAATCGCTTTTCAAAGTCTAGGAGTCGTCAATTAGGGTTAGGTAGTAGATGTATGTTCACTATCATCATAGCCCATCTAAAAGCGCACGGCACCGCATCCCAACGGTCGCTCTGCACCACAACGCGCTTCTGATGAGCAGGGTCTTCCATTCCATCCTGAGTCCACCAACTGCAAGTTCAGTTGAGCAAACTCTGCAGAGGAGCGTCGGAAATCGGAGTGGATTTCGTTGGTTTTCTATTATTTAAACACCTGACTAAAATTCCACTATTTGGAGAAAAACTCGGACATCATCCAACATCAATTCAGTTGGATTTAAAGTCATGGAACTATCAGTGCTGCGCAGCAGTTTGCTTTTGCTATGTGTGACAACTATCCAAACTTGCCATGGTGGCGGACAGAGGGCCAAGGTTCTGGACAGAGGTCTGACTGATAGACATCTGCCAAACAGCTTTGGTCCAGCTGCTGTATGGTCTGCCACTGGAGAAGAAGGAAAaagtggagaagggagaagggatgagagaggagagagagagagaggaatggcaTCTTCTAACATGTTCCTTCAGAACTGCATGGACAAACACCAGTTGGTTGGTGTTCTCCGTCAGATGGAGAAGTTTCTGAAGGGACAGGAGATGAGATTCACAGAGGGACTACGCATCATGAAGTCCAAACTGGCAACCCTACAGAACTCTGTGTCCAAGCTACCGCAGGCCGACCAGTCGGCTGctccgtCCGTTTGCCCCTCCCTGGAAGCCCCTGTCCACGGGAGGAAGTTTGGCTCCAAGTATTTCATCGGTCATGAGGTCCATTTTACCTGTTCCCATGGTTACCACCTGGTGGGCCCCGAGACACGTGTGTGTCAGGAGAACGGGAGTTGGAGCGGTGTCAACACCATCTGTAAAGATGTGAGTGAGTGCTCCAGTAACCCATGCCAGAACGGAGGGACCTGTGTAGAGGGAGTAAACCAGTACAGGTGCACCTGTTCACAGAGCTGGAATGGATCCAACTGTCAGCACCAGACACAGACGGCTCCGCCCGAGTGGAGCGTCATGAATGACCCGGCGTTCAGCAGACGTCCCCGCTGTGCCAAAGTGGACCGCGCCCAACACTGCAGCTGCGATGCTGGCTTTCACATGAGTGGGACATCTGACAACAGTATCTGCCAGGatgTAAATGAGTGTGAGGTGTACCGGCTGGACCAGGGGGGCAAGCtgtgtgtgtacgagtgtgtCAACATACCAGGCTCCTACCACTGCTCCTGCCCCAGCCACTATAAGCTGCTGCCTGATGGTAGGAGCTGTGAGGATGTGGATGAGTGTCTGACCCAGCAGCACAACTGCAGTAGAGGAACAACATGCATCAACACTGGAGGAGGGTTCCAGTGTGTGAGCCCGGAGTGTCCCCGATCACACGGCAACATCAGCTACGTCAAGACGTCTCCCTTTCAGTGTGAGAGGAACCCCTGCCCTATGGAGAGTCGTTCCTGTCACCTGGCTCCTAAGACGGTCTCCTTCcactacctctccctcccctccaaccTCCAGACCCCGGCAACCCTGTTCCGCATGGCAACCGCAGCCGCCCCCGGCCGCCCCGGCCCCGATAGCCTGAGATTCGGCATTGTCGGGGGAAACAGCCGCGGGATGTTCGTGATGCAAAGGTCGGACCGCCAGACTGGTGAATTGATCCTAGTTCAGAGGTTAAGAGGACCACAGGATATCAGTGTTGATGTGGACATGTCAGAGTATAGTGATCGCACCTTCCAGGCTAAGCATGTGGCGAAGGTGCATATTCTGGTATCAGCGTATAACTTCTGAGGAGGATGGACGGACAGAGGAACGAgtgaaagggacagagggaggaagggagaagaggaacgaagaaggaggagagagggagaagaatggagagagggatgaggagagagggagaag
>XM_036960867.1
TGCCTGCTCTATTCTGCCGTTTGAGTCTGGGGATCGCGTCACAGCCTATGAGAAGGACAGAACATTGGAGAGAGTGACGCAAATGTGTTGTCGAGCGGTGGCAGGGATTATTCTTTCATTATCCATTTAATCGCTTTTCAAAGTCTAGGAGTCGTCAATTAGGGTTAGGTAGTAGATGTATGTTCACTATCATCATAGCCCATCTAAAAGCGCACGGCACCGCATCCCAACGGTCGCTCTGCACCACAACGCGCTTCTGATGAGCAGGGTCTTCCATTCCATCCTGAGTCCACCAACTGCAAGTTCAGTTGAGCAAACTCTGCAGAGGAGCGTCGGAAATCGGAGTGGATTTCGTTGGTTTTCTATTATTTAAACACCTGACTAAAATTCCACTATTTGGAGAAAAACTCGGACATCATCCAACATCAATTCAGTTGGATTTAAAGTCATGGAACTATCAGTGCTGCGCAGCAGTTTGCTTTTGCTATGTGTGACAACTATCCAAACTTGCCATGGTGGCGGACAGAACTGCATGGACAAACACCAGTTGGTTGGTGTTCTCCGTCAGATGGAGAAGTTTCTGAAGGGACAGGAGATGAGATTCACAGAGGGACTACGCATCATGAAGTCCAAACTGGCAACCCTACAGAACTCTGTGTCCAAGCTACCGCAGGCCGACCAGTCGGCTGctccgtCCGTTTGCCCCTCCCTGGAAGCCCCTGTCCACGGGAGGAAGTTTGGCTCCAAGTATTTCATCGGTCATGAGGTCCATTTTACCTGTTCCCATGGTTACCACCTGGTGGGCCCCGAGACACGTGTGTGTCAGGAGAACGGGAGTTGGAGCGGTGTCAACACCATCTGTAAAGATGTGAGTGAGTGCTCCAGTAACCCATGCCAGAACGGAGGGACCTGTGTAGAGGGAGTAAACCAGTACAGGTGCACCTGTTCACAGAGCTGGAATGGATCCAACTGTCAGCACCAGACACAGACGGCTCCGCCCGAGTGGAGCGTCATGAATGACCCGGCGTTCAGCAGACGTCCCCGCTGTGCCAAAGTGGACCGCGCCCAACACTGCAGCTGCGATGCTGGCTTTCACATGAGTGGGACATCTGACAACAGTATCTGCCAGGatgTAAATGAGTGTGAGGTGTACCGGCTGGACCAGGGGGGCAAGCtgtgtgtgtacgagtgtgtCAACATACCAGGCTCCTACCACTGCTCCTGCCCCAGCCACTATAAGCTGCTGCCTGATGGTAGGAGCTGTGAGGATGTGGATGAGTGTCTGACCCAGCAGCACAACTGCAGTAGAGGAACAACATGCATCAACACTGGAGGAGGGTTCCAGTGTGTGAGCCCGGAGTGTCCCCGATCACACGGCAACATCAGCTACGTCAAGACGTCTCCCTTTCAGTGTGAGAGGAACCCCTGCCCTATGGAGAGTCGTTCCTGTCACCTGGCTCCTAAGACGGTCTCCTTCcactacctctccctcccctccaaccTCCAGACCCCGGCAACCCTGTTCCGCATGGCAACCGCAGCCGCCCCCGGCCGCCCCGGCCCCGATAGCCTGAGATTCGGCATTGTCGGGGGAAACAGCCGCGGGATGTTCGTGATGCAAAGGTCGGACCGCCAGACTGGTGAATTGATCCTAGTTCAGAGGTTAAGAGGACCACAGGATATCAGTGTTGATGTGGACATGTCAGAGTATAGTGATCGCACCTTCCAGGCTAAGCATGTGGCGAAGGTGCATATTCTGGTATCAGCGTATAACTTCTGAGGAGGATGGACGGACAGAGGAACGAgtgaaagggacagagggaggaagggagaagaggaacgaagaaggaggagagagggagaagaatggagagagggatgaggagagagggagaag

Function

NR:

description
fibulin-7-like

GO: NA

KEGG:

id description
K17342 FBLN7; fibulin 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021581369.2 False 2065 mRNA 0.53 9 56856580 56886643
XM_036960867.1 True 1897 mRNA 0.53 8 56856580 56886643

Neighbor

gene id symbol gene type direction distance location
LOC110503002 LOC106610976 coding downstream 76336 56760079 ~ 56780244 (-)
LOC110503038 NA coding downstream 796985 56044331 ~ 56059595 (-)
LOC110502998 LOC106610959 coding downstream 871728 55981267 ~ 55984852 (-)
LOC110502996 LOC107666370 coding downstream 1652387 55190470 ~ 55204193 (-)
LOC110502991 NA coding downstream 1785434 55068829 ~ 55071146 (-)
LOC110503039 LOC106610997 coding upstream 20837 56907480 ~ 57068071 (-)
LOC110503007 LOC106586972 coding upstream 184684 57071327 ~ 57116725 (-)
LOC118943925 NA coding upstream 222417 57108428 ~ 57110865 (-)
LOC110503010 LOC106590975 coding upstream 452884 57339527 ~ 57381651 (-)
LOC110503011 LOC106611131 coding upstream 502967 57389610 ~ 57433456 (-)
G1883306 NA non-coding downstream 81565 56732793 ~ 56775015 (-)
G1883244 NA non-coding downstream 146692 56644007 ~ 56709888 (-)
G1883236 NA non-coding downstream 172686 56633988 ~ 56683894 (-)
G1883392 NA non-coding upstream 1912 56888555 ~ 56888772 (-)
G1883396 NA non-coding upstream 3286 56889929 ~ 56890159 (-)
G1883397 NA non-coding upstream 4771 56891414 ~ 56891718 (-)
G1883574 NA non-coding upstream 16728 56903371 ~ 56905418 (-)
G1883632 NA non-coding upstream 125197 57011840 ~ 57013267 (-)
G1883219 NA other downstream 245940 56606006 ~ 56610640 (-)
G1881414 NA other downstream 1852956 55002766 ~ 55003624 (-)
G1880780 NA other downstream 2609894 54244782 ~ 54246686 (-)
LOC110503036 LOC106610742 other downstream 2782631 54039018 ~ 54073953 (-)
LOC110503041 LOC106579580 other upstream 703401 57590001 ~ 57616121 (-)
G1884227 NA other upstream 847714 57734357 ~ 57735498 (-)
G1885150 NA other upstream 1347576 58234219 ~ 58242567 (-)
G1885863 NA other upstream 2203030 59089673 ~ 59090564 (-)

Expression


Co-expression Network