LOC110503013


Basic Information

Item Value
gene id LOC110503013
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 57545275 ~ 57550796 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002470415.2
tacaacacaacccactaatagcctaacacataacacacggctgtctgtgcgggtcgctacaaTACTAATACTTCTGTTGTTAGGGCTACTAATAATGACTCACCACAAAGTTAAACTTCAGGCTTCTTCAATATATAGTTTTGACAGGCTACTGAGTATTTGTGAGAAAGACTATCGTAAAGagttcccagttgtcttgaaagcaccatcaatccagagaatgccagactttgatgacaaaattttgACAAAATGTGCCCACAAGGACTGcagcaccaccttcctgttcaagtgagcatggcacaagGTCCATTACCAGCCTTCACATCTCTCCTCCTCAAATCTGTGGACCTGGCCAGGGGGAGGCCTTTTACGAGGGTGGATGAGGCAGCAATTCTAGCATTAGGGGGTTTGCTTGTTGGTAGGTGCCGCTTAGCTGTCCTCTGAGCTCCCTTGTTGTTTCTGGATGGAGCTGGCTTCAGGTTCTTGTCTACAGAGGGACACACAGATAGTGGCTTATTATAACACATTACACAAAGGGAAATTGCTATAGTCAAACACACAAATGTGAATTTAAGAGAACTCACCTTTGGGGGGGTGTCTGTTCAGAACTGGGGGCAAACATGGACGGCTGAATTTCAGgtgtgagggaggggaggggggacaaCCCGGTTGGAGCTGGTATCGGTTTCTTGTCTACAGAAGGACAAACAGGCATTAGTGTCTTAATGAACACAATATATTGCTATATTTAAACGTGATTGTTACAGGTTATTTTAACGAACACATTCATTTTTTGGGTAATttattgtttttcttttcattAACAAGttgtattgattatttattgtTTGAATTGTTTATTTTTGTAAGATTAACTACATTGatggaataaaaaaaatatataataaaaaataaataaagacctCTCCATTGGGGAATTGCCTGTTCAGAACTGGAGGCCGCCATGGACAGCTACATGTCAGGTGTGGAGGTTGGTCCTTATTTTCCAACACGCCACtgggctctctcctctctttccctcaggTACCTTTTTGTTCTGTCACACTCCAGTTGGGCCTTTTgcgctttcctcctcctccttctcaagGTGTTGAGCTGCCTTATCCAGCCTATGTAGCTGTGATAACCAAAATAAAGAATTAGCCGATACACTGAAAGGGTGGATAACAAATATTCCGATATATAGAAACTAATGTTAAAACATGTTACCTTCTATGTTTACGGTCTGTAGAGTTATAGACTGCATTGATGATAGTCCCAAAGCCTGCCCTATTGAAACCTCTATTCATATTGAGTAATAGATCTTGGGAAACTGAGACTATCCCTGAGACTCTCCCAAACTGCAACAAGTGAAGATGTGCAGCAACCAATCGGAGATTAGTGGGCATCGCTGGGGGGGTAGACTCCCTGCTGTCACCtgtagtatctgctggtcatctcaaATCTCTGAGTAGAACCTGACtatttttttgttgtgtgtgttacaACTCTGTAAACAGTGTGTTTATTGACTAGGACAATTATGACTGATTTACTTGTCTTTTTATTTGTTGAACATTATAGAGTGTAtgacaaataaaaatgaattTCAAGGGAGAAAAAGAGCTTGcattgaattatttatttcacagGGAATGTCATGTGTGCACCAACCCAGTATGATGTCCCCTACACCTACTGTACAAGTTAAAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002470415.2 True 1717 mRNA 0.41 3 57545275 57550796

Neighbor

gene id symbol gene type direction distance location
LOC110503012 LOC106611138 coding upstream 4907 57499694 ~ 57540368 (+)
LOC118943926 NA coding upstream 145838 57379129 ~ 57399437 (+)
LOC110503004 LOC106611018 coding upstream 701800 56829056 ~ 56843475 (+)
LOC110503003 LOC106611055 coding upstream 716543 56812404 ~ 56828732 (+)
LOC118943924 NA coding upstream 835309 56701366 ~ 56709966 (+)
LOC110503040 LOC106579579 coding downstream 19950 57570746 ~ 57588495 (+)
LOC118943835 NA coding downstream 1313819 58864615 ~ 58865931 (+)
LOC110503019 LOC106611219 coding downstream 1785667 59336463 ~ 59345077 (+)
LOC118943836 NA coding downstream 2030303 59581099 ~ 59581875 (+)
LOC110503016 LOC106611257 coding downstream 2152598 59703394 ~ 59816421 (+)
G1883863 NA non-coding upstream 49128 57495920 ~ 57496147 (+)
G1883850 NA non-coding upstream 71043 57473996 ~ 57474232 (+)
G1883849 NA non-coding upstream 71880 57473168 ~ 57473395 (+)
G1883848 NA non-coding upstream 73633 57471348 ~ 57471642 (+)
G1883843 NA non-coding upstream 85416 57459441 ~ 57459859 (+)
G1883879 NA non-coding downstream 8264 57559060 ~ 57559268 (+)
G1883881 NA non-coding downstream 10940 57561736 ~ 57562058 (+)
G1884093 NA non-coding downstream 39249 57590045 ~ 57590267 (+)
G1884095 NA non-coding downstream 42364 57593160 ~ 57593406 (+)
G1884099 NA non-coding downstream 45750 57596546 ~ 57596777 (+)
G1883457 NA other upstream 532057 57012037 ~ 57013218 (+)
LOC110503001 LOC106611028 other upstream 818081 56613066 ~ 56727194 (+)
G1882831 NA other upstream 1002019 56533617 ~ 56543256 (+)
G1882830 NA other upstream 1006792 56529795 ~ 56538483 (+)
G1881371 NA other upstream 2541603 55002782 ~ 55003672 (+)
G1885587 NA other downstream 1311418 58862214 ~ 58864502 (+)
G1886557 NA other downstream 2173468 59724264 ~ 59736661 (+)
G1886558 NA other downstream 2176950 59727746 ~ 59736471 (+)
G1886560 NA other downstream 2198922 59749718 ~ 59786095 (+)
G1886561 NA other downstream 2233190 59783986 ~ 59787989 (+)

Expression


Co-expression Network