LOC110503042 (kcnk1)


Basic Information

Item Value
gene id LOC110503042
gene name kcnk1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 59962215 ~ 59972534 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036960909.1
CTGATCGTATGCGACCTTCGTGAACAACGACTACAGACAAAGAGGTGCCATATACTCGCTCTCTACGCCCACGTGTCTGTTTCGATGTGTTTCACCTAGGAGCAGAGAAGAGGGGAACAGACTGACGTAACATAGTCCCGGCATCCTCCGCCGCCACATCATCCTCTTCTCAGCAGCAGAACGACCCTTCTCGGTGAAAGTGAACAGAATATACAGaggacaggcagagaggagacgGAAAAGAAACCAAAACGTATAGAGTAACGATTCTCACATGCTTGCTTTTGGTCGTAGTTGATAAGGACCTCGCGCTTGAACTAGAAATAAGCTACATGATATTTTAGCCGACGTTGTTACTATTTTGGCGTCTATAAACTATTCATTGTTTATGTTAAGAGTATAAACTGTAACACATTGAGGTTTCAACAACTCTTGGAAAATGCTACAATCTCTAACTAGCAATTCGTGTGTGCGGTTGATACAAAGTCACAAATCGACATGGTATTTTTTGCTTCTAGTCTTGGGATATATTCTTTATCTTATATTCGGAGCTGTTGTCTTTTCATCGGTGGAACTGCCTTATGAAGACCGGCTAAGACAGGAGTTACGAACCATCAAAAAACTGTTCCTCCAGGACCACGAATGTCTGTCGGAAGAACGCCTTGAGGAGTTTCTGGAGAAGGCGCTCGAGGCCAGTAACTATGGAGTGTCCATTCTCAATAACGCATCGTCAAATTGGAACTGGGACTTCACCTCCTCGCTCTTTTTCGCCAGTACTGTATTGTCTACCACAGGATACGGTCACACCGCTCCGCTCTCCGACGGGGGAAAAGCTTTTTGTATCGTCTACTCTGTGCTCGGCATCCCcttcaccctcctcttcctcactgccGTGGTCCAACGCATCATGATCTTCAGCACACGCCGGCCCGTCATGTATGTGTCCACCCGCTGGGGCCTGTCCAAACCTTTGGTAGCCATGGTCCACGCCACGCTCCTCGCCATCCTGGCTGCTTCCTGTTTCTTCCTCATCCCGGCAGCCATCTTCTCCTCCCTAGAGGAGAACTGGAACTTCCTGGAGAGTTTCTACTTCTGTTTTATATCTCTCAGTACCATCGGACTGGGAGATTACGTACCAGGAGAGTCCTTCAACCAGAGGTTCAGACAGATCTATAAAGTGGGCATCACTGtctaccTCCTCCTGGGCTTGGTCGTGATGCTTGTGGTCCTGGAGACGTTCTGTGAGCTGCAGCAGCTGAAGACCCTGAGGAAGATGTTCTATCTGAAGAAGGAGAAACCACAGGACCGCCTGGCTATACTGGAGCATGACCATCTGGCCTTCACCGCCGTGTCCCACCAGAACAACTCCACCTCGCTCAGGGAGGACAACACCAAGAACCTGCCCTTCGTTAGTGTCCCCGAGCTGGCCTCGCCCGGTGGGGACGACCCCATGATCGGCTAGAAAGGGGGTGGGGATAGTTAAAATGTTGGGGTGAAACTAGGGAAGGCCAAGGAGAGTAGAAGTGTAGTGAGGGGGGAGGGATGGTGAAACTAAGGTTGCAATCCAATTCTCTATCCTTCTTCTGAAGTGTGCACTTGATCACTGCATTTGTCactataccctgatgaagacagcttgtctgtcgaaacgttggttatTAGGATATTAAATGATTGCATCTGAGCCCCTGGGTGTGCAGCTCTCCTTTCctttttcaagtgttctactccgctagccagcacctcgcctaaacacgtGTTCTACTcggctagccagcacctcgcctaaacaggtgttctactccgctagccagcacctcgcctaaa

Function

symbol description
kcnk1 Enables identical protein binding activity; potassium ion leak channel activity; and sodium channel activity. Involved in potassium ion transmembrane transport; regulation of resting membrane potential; and sodium ion transmembrane transport. Located in intracellular membrane-bounded organelle. Is integral component of plasma membrane. Part of potassium channel complex.

NR:

description
PREDICTED: potassium channel subfamily K member 1 isoform X1

GO: NA

KEGG:

id description
K04912 KCNK1, K2P1.1; potassium channel subfamily K member 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036960909.1 True 1827 mRNA 0.50 3 59962215 59972534

Neighbor

gene id symbol gene type direction distance location
LOC110503015 LOC106589751 coding upstream 95440 59847111 ~ 59866775 (+)
LOC110503016 LOC106611257 coding upstream 145794 59703394 ~ 59816421 (+)
LOC118943836 NA coding upstream 380340 59581099 ~ 59581875 (+)
LOC110503019 LOC106611219 coding upstream 617138 59336463 ~ 59345077 (+)
LOC118943835 NA coding upstream 1096284 58864615 ~ 58865931 (+)
slc35f3b slc35f3 coding downstream 40171 60012705 ~ 60174129 (+)
col9a1b LOC106560234 coding downstream 352755 60325289 ~ 60371061 (+)
LOC110516668 lmbrd1 coding downstream 673532 60646066 ~ 60907352 (+)
LOC118943928 LOC106577473 coding downstream 1521123 61493657 ~ 61522049 (+)
LOC118943929 LOC106577282 coding downstream 1568618 61541152 ~ 61555170 (+)
G1886620 NA non-coding upstream 138590 59823287 ~ 59823625 (+)
G1886615 NA non-coding upstream 144525 59817424 ~ 59817690 (+)
G1886570 NA non-coding upstream 163217 59798622 ~ 59798998 (+)
G1886562 NA non-coding upstream 173585 59768276 ~ 59788630 (+)
G1886645 NA non-coding downstream 3614 59976148 ~ 59976670 (+)
G1886685 NA non-coding downstream 13801 59986335 ~ 59987088 (+)
G1886689 NA non-coding downstream 17793 59990327 ~ 59990543 (+)
G1886728 NA non-coding downstream 112157 60084691 ~ 60084897 (+)
G1886731 NA non-coding downstream 117252 60089786 ~ 60090030 (+)
G1886561 NA other upstream 174226 59783986 ~ 59787989 (+)
G1886560 NA other upstream 176120 59749718 ~ 59786095 (+)
G1886557 NA other upstream 225554 59724264 ~ 59736661 (+)
G1886558 NA other upstream 225744 59727746 ~ 59736471 (+)
G1885587 NA other upstream 1097713 58862214 ~ 58864502 (+)
G1887835 NA other downstream 1304241 61276775 ~ 61277763 (+)
G1888298 NA other downstream 1954212 61926746 ~ 61927857 (+)
G1888544 NA other downstream 2591991 62564525 ~ 62565083 (+)

Expression


Co-expression Network